RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 EXOC3O60645 756 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 TBL1XO60907 577 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 TCEA3O75764 348 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 PIAS2O75928 621 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 MOCS3O95396 460 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 VNN1O95497 513 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 FGFR1OPO95684 399 aaKnown RBP4.96□□□□□ -1.62
ATXN3-247ENST00000557311 ZBED1O96006 694 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 ASS1P00966 412 aaKnown RBP4.96□□□□□ -1.62
ATXN3-247ENST00000557311 IL1BP01584 269 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 CYP1A1P04798 512 aaPredicted RBP4.96□□□□□ -1.62
ATXN3-247ENST00000557311 ITGA2BP08514 1039 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 TGM2P21980 687 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 ENPP1P22413 925 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 MAT2AP31153 395 aaKnown RBP4.96□□□□□ -1.62
ATXN3-247ENST00000557311 NNMTP40261 264 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 CSKP41240 450 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 STAT6P42226 847 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 PSMD8P48556 350 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 SLC11A2P49281 568 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 CASP4P49662 377 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 SLC8A3P57103 927 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 ARPC4P59998 168 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 PPP2CBP62714 309 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 PPP2CAP67775 309 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 ECT2LQ008S8 904 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 AMPD3Q01432 767 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 INCA1Q0VD86 236 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 ELAVL3Q14576 367 aaKnown RBP4.96□□□□□ -1.62
ATXN3-247ENST00000557311 EMC4Q5J8M3 183 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 RAB41Q5JT25 222 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 PIK3R6Q5UE93 754 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 FAM46CQ5VWP2 391 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 RNF219Q5W0B1 726 aaPredicted RBP4.96□□□□□ -1.62
ATXN3-247ENST00000557311 NEK5Q6P3R8 708 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 CLEC18BQ6UXF7 455 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 RBM44Q6ZP01 1051 aaKnown RBP4.96□□□□□ -1.62
ATXN3-247ENST00000557311 EPM2AIP1Q7L775 607 aaPredicted RBP4.96□□□□□ -1.62
ATXN3-247ENST00000557311 BRAPQ7Z569 592 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 KRT77Q7Z794 578 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 C14orf80Q86SX3 495 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 DAAM2Q86T65 1068 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 PIGZQ86VD9 579 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 HOOK3Q86VS8 718 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 TRIM69Q86WT6 500 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 UNC45BQ8IWX7 931 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 C12orf56Q8IXR9 622 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 CARFQ8N187 725 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 STK40Q8N2I9 435 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 SMYD1Q8NB12 490 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 CLEC18CQ8NCF0 446 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 WDR48Q8TAF3 677 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 IFI44Q8TCB0 444 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 RNF139Q8WU17 664 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 TEKT4Q8WW24 435 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 FBXW5Q969U6 566 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 FAM131CQ96AQ9 280 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 EXOC2Q96KP1 924 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 KCNC2Q96PR1 638 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 TWNKQ96RR1 684 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 OSBPL9Q96SU4 736 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 DDX50Q9BQ39 737 aaKnown RBP4.96□□□□□ -1.62
ATXN3-247ENST00000557311 CD244Q9BZW8 370 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 SLC25A18Q9H1K4 315 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 TNMDQ9H2S6 317 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 DCAF16Q9NXF7 216 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 ASH2LQ9UBL3 628 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 DKK3Q9UBP4 350 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 HMGXB4Q9UGU5 601 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 SLCO3A1Q9UIG8 710 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 INTS6Q9UL03 887 aaKnown RBP4.96□□□□□ -1.62
ATXN3-247ENST00000557311 MAN2B2Q9Y2E5 1009 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 PCDHGA7Q9Y5G6 932 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 CSNK1G3Q9Y6M4 447 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 MYOFQ9NZM1 2061 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 UNC79Q9P2D8 2635 aa4.95□□□□□ -1.62
ATXN3-247ENST00000557311 OBSL1O75147 1896 aa4.95□□□□□ -1.62
ATXN3-247ENST00000557311 CCDC187A0A096LP49 1063 aa4.95□□□□□ -1.62
ATXN3-247ENST00000557311 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-247ENST00000557311 LY6G6EA0A0G2JKS1 128 aa4.95□□□□□ -1.62
ATXN3-247ENST00000557311 GOLGA6L7A0A1B0GV03 622 aa4.95□□□□□ -1.62
ATXN3-247ENST00000557311 LINC00854A0A1B0GVQ3 168 aa4.95□□□□□ -1.62
ATXN3-247ENST00000557311 TYW5A2RUC4 315 aaKnown RBP4.95□□□□□ -1.62
ATXN3-247ENST00000557311 GOLGA6L4A6NEF3 574 aa4.95□□□□□ -1.62
ATXN3-247ENST00000557311 LRRIQ3A6PVS8 624 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-247ENST00000557311 TMX2-CTNND1H3BSU7 103 aa4.95□□□□□ -1.62
ATXN3-247ENST00000557311 DDX3XO00571 662 aaKnown RBP eCLIP4.95□□□□□ -1.62
ATXN3-247ENST00000557311 IKBKBO14920 756 aa4.95□□□□□ -1.62
ATXN3-247ENST00000557311 CHUKO15111 745 aa4.95□□□□□ -1.62
ATXN3-247ENST00000557311 GSTA4O15217 222 aa4.95□□□□□ -1.62
ATXN3-247ENST00000557311 SLC31A1O15431 190 aa4.95□□□□□ -1.62
ATXN3-247ENST00000557311 NOBOXO60393 691 aa4.95□□□□□ -1.62
ATXN3-247ENST00000557311 ACSL4O60488 711 aa4.95□□□□□ -1.62
ATXN3-247ENST00000557311 RTN2O75298 545 aa4.95□□□□□ -1.62
ATXN3-247ENST00000557311 FBXO21O94952 628 aa4.95□□□□□ -1.62
ATXN3-247ENST00000557311 CRTAMO95727 393 aa4.95□□□□□ -1.62
ATXN3-247ENST00000557311 LTFP02788 710 aa4.95□□□□□ -1.62
ATXN3-247ENST00000557311 MCM3P25205 808 aa4.95□□□□□ -1.62
ATXN3-247ENST00000557311 RPL13P26373 211 aaKnown RBP4.95□□□□□ -1.62
ATXN3-247ENST00000557311 GJB2P29033 226 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms