RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 MCOLN2Q8IZK6 566 aa8.65□□□□□ -1.02
VRK1-206ENST00000557222 NETO2Q8NC67 525 aa8.65□□□□□ -1.02
VRK1-206ENST00000557222 ANKRD20A12PQ8NF67 263 aa8.65□□□□□ -1.02
VRK1-206ENST00000557222 OR4D9Q8NGE8 314 aa8.65□□□□□ -1.02
VRK1-206ENST00000557222 FNIP1Q8TF40 1166 aa8.65□□□□□ -1.02
VRK1-206ENST00000557222 CATSPER2Q96P56 530 aa8.65□□□□□ -1.02
VRK1-206ENST00000557222 MCEEQ96PE7 176 aa8.65□□□□□ -1.02
VRK1-206ENST00000557222 DDA1Q9BW61 102 aa8.65□□□□□ -1.02
VRK1-206ENST00000557222 CINPQ9BW66 212 aaPredicted RBP8.65□□□□□ -1.02
VRK1-206ENST00000557222 LGR4Q9BXB1 951 aa8.65□□□□□ -1.02
VRK1-206ENST00000557222 FRMD8Q9BZ67 464 aaPredicted RBP8.65□□□□□ -1.02
VRK1-206ENST00000557222 ASPSCR1Q9BZE9 553 aa8.65□□□□□ -1.02
VRK1-206ENST00000557222 NUP62CLQ9H1M0 184 aa8.65□□□□□ -1.02
VRK1-206ENST00000557222 SEMA6CQ9H3T2 930 aa8.65□□□□□ -1.02
VRK1-206ENST00000557222 SP110Q9HB58 689 aa8.65□□□□□ -1.02
VRK1-206ENST00000557222 PARVAQ9NVD7 372 aa8.65□□□□□ -1.02
VRK1-206ENST00000557222 FOXJ2Q9P0K8 574 aa8.65□□□□□ -1.02
VRK1-206ENST00000557222 MYO6Q9UM54 1294 aa8.65□□□□□ -1.02
VRK1-206ENST00000557222 AP4E1Q9UPM8 1137 aa8.65□□□□□ -1.02
VRK1-206ENST00000557222 PPIL1Q9Y3C6 166 aa8.65□□□□□ -1.02
VRK1-206ENST00000557222 DOPEY2Q9Y3R5 2298 aa8.65□□□□□ -1.03
VRK1-206ENST00000557222 IGHV5-10-1A0A0J9YXX1 117 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 LGALS16A8MUM7 142 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 B4E171 279 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 DAPK3O43293 454 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 RNF8O76064 485 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 HEXIM1O94992 359 aaKnown RBP8.64□□□□□ -1.03
VRK1-206ENST00000557222 PDGFAP04085 211 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 PYGLP06737 847 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 H2AFB1P0C5Y9 115 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 H2AFB2P0C5Z0 115 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 FAM87AP0C7U9 286 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 CYP2A6P11509 494 aaPredicted RBP8.64□□□□□ -1.03
VRK1-206ENST00000557222 FERP16591 822 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 ERCC2P18074 760 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 CD1CP29017 333 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 VIPR1P32241 457 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 TSPAN7P41732 249 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 RGRP47804 291 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 KLK7P49862 253 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 SCNN1BP51168 640 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 OR1D5P58170 312 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 MAMLD1Q13495 774 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 C16orf72Q14CZ0 275 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 SETDB1Q15047 1291 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 ACOX1Q15067 660 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 TCEA2Q15560 299 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 PLEKHA7Q6IQ23 1121 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 BORAQ6PGQ7 559 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 RFX8Q6ZV50 586 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 BBS5Q8N3I7 341 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 AGBL5Q8NDL9 886 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 CCL4L1Q8NHW4 92 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 NKD1Q969G9 470 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 TP53INP1Q96A56 240 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 NUS1Q96E22 293 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 DTD2Q96FN9 168 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 CELF6Q96J87 481 aaKnown RBP8.64□□□□□ -1.03
VRK1-206ENST00000557222 TEFMQ96QE5 360 aaKnown RBP8.64□□□□□ -1.03
VRK1-206ENST00000557222 ERGIC2Q96RQ1 377 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 FUCA2Q9BTY2 467 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 EFHD1Q9BUP0 239 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 SLC12A9Q9BXP2 914 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 RASSF4Q9H2L5 321 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 DHX35Q9H5Z1 703 aaKnown RBP8.64□□□□□ -1.03
VRK1-206ENST00000557222 CARS2Q9HA77 564 aaKnown RBP8.64□□□□□ -1.03
VRK1-206ENST00000557222 SRA1Q9HD15 236 aaKnown RBP8.64□□□□□ -1.03
VRK1-206ENST00000557222 MRPL40Q9NQ50 206 aaKnown RBP8.64□□□□□ -1.03
VRK1-206ENST00000557222 SPATS2LQ9NUQ6 558 aaKnown RBP8.64□□□□□ -1.03
VRK1-206ENST00000557222 CHMP5Q9NZZ3 219 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 TAAR2Q9P1P5 351 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 PDP2Q9P2J9 529 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 B4GALT6Q9UBX8 382 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 LIMA1Q9UHB6 759 aaKnown RBP8.64□□□□□ -1.03
VRK1-206ENST00000557222 PHTF1Q9UMS5 762 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 SLC17A4Q9Y2C5 497 aa8.64□□□□□ -1.03
VRK1-206ENST00000557222 ANKRD36A6QL64 1941 aa8.63□□□□□ -1.03
VRK1-206ENST00000557222 TEX33O43247 280 aa8.63□□□□□ -1.03
VRK1-206ENST00000557222 PRPSAP2O60256 369 aa8.63□□□□□ -1.03
VRK1-206ENST00000557222 SMNDC1O75940 238 aaKnown RBP eCLIP8.63□□□□□ -1.03
VRK1-206ENST00000557222 ECEL1O95672 775 aa8.63□□□□□ -1.03
VRK1-206ENST00000557222 PRKCGP05129 697 aa8.63□□□□□ -1.03
VRK1-206ENST00000557222 FGF3P11487 239 aaPredicted RBP8.63□□□□□ -1.03
VRK1-206ENST00000557222 CCL4P13236 92 aa8.63□□□□□ -1.03
VRK1-206ENST00000557222 KRT10P13645 584 aa8.63□□□□□ -1.03
VRK1-206ENST00000557222 CR2P20023 1033 aa8.63□□□□□ -1.03
VRK1-206ENST00000557222 PSMA2P25787 234 aa8.63□□□□□ -1.03
VRK1-206ENST00000557222 ALDH4A1P30038 563 aa8.63□□□□□ -1.03
VRK1-206ENST00000557222 CSTF2P33240 577 aaKnown RBP eCLIP8.63□□□□□ -1.03
VRK1-206ENST00000557222 FASLGP48023 281 aa8.63□□□□□ -1.03
VRK1-206ENST00000557222 COPB1P53618 953 aaKnown RBP8.63□□□□□ -1.03
VRK1-206ENST00000557222 CDK3Q00526 305 aa8.63□□□□□ -1.03
VRK1-206ENST00000557222 SRSF6Q13247 344 aaKnown RBP8.63□□□□□ -1.03
VRK1-206ENST00000557222 BIRC2Q13490 618 aa8.63□□□□□ -1.03
VRK1-206ENST00000557222 LRP8Q14114 963 aa8.63□□□□□ -1.03
VRK1-206ENST00000557222 CNGA3Q16281 694 aa8.63□□□□□ -1.03
VRK1-206ENST00000557222 AMZ1Q400G9 498 aa8.63□□□□□ -1.03
VRK1-206ENST00000557222 TMEM71Q6P5X7 295 aa8.63□□□□□ -1.03
VRK1-206ENST00000557222 VASH2Q86V25 355 aa8.63□□□□□ -1.03
VRK1-206ENST00000557222 HEATR4Q86WZ0 1026 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms