RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 KNL1Q8NG31 2342 aa10.6□□□□□ -0.71
LINC00239-201ENST00000556973 EME2A4GXA9 379 aaPredicted RBP10.6□□□□□ -0.71
LINC00239-201ENST00000556973 FAM221BA6H8Z2 402 aa10.6□□□□□ -0.71
LINC00239-201ENST00000556973 STX7O15400 261 aaKnown RBP10.6□□□□□ -0.71
LINC00239-201ENST00000556973 USP12O75317 370 aa10.6□□□□□ -0.71
LINC00239-201ENST00000556973 RFPL3O75679 317 aa10.6□□□□□ -0.71
LINC00239-201ENST00000556973 CELA2BP08218 269 aaPredicted RBP10.6□□□□□ -0.71
LINC00239-201ENST00000556973 ETS1P14921 441 aa10.6□□□□□ -0.71
LINC00239-201ENST00000556973 RPL22P35268 128 aaKnown RBP10.6□□□□□ -0.71
LINC00239-201ENST00000556973 SPAM1P38567 509 aa10.6□□□□□ -0.71
LINC00239-201ENST00000556973 ADCY8P40145 1251 aa10.6□□□□□ -0.71
LINC00239-201ENST00000556973 GNPDA1P46926 289 aa10.6□□□□□ -0.71
LINC00239-201ENST00000556973 LMAN1P49257 510 aa10.6□□□□□ -0.71
LINC00239-201ENST00000556973 ACADVLP49748 655 aa10.6□□□□□ -0.71
LINC00239-201ENST00000556973 E2F1Q01094 437 aa10.6□□□□□ -0.71
LINC00239-201ENST00000556973 OLIG2Q13516 323 aa10.6□□□□□ -0.71
LINC00239-201ENST00000556973 NR0B2Q15466 257 aa10.6□□□□□ -0.71
LINC00239-201ENST00000556973 PYCR3Q53H96 274 aa10.6□□□□□ -0.71
LINC00239-201ENST00000556973 DOK6Q6PKX4 331 aa10.6□□□□□ -0.71
LINC00239-201ENST00000556973 GALNT15Q8N3T1 639 aa10.6□□□□□ -0.71
LINC00239-201ENST00000556973 CHCHD4Q8N4Q1 142 aa10.6□□□□□ -0.71
LINC00239-201ENST00000556973 PRELID2Q8N945 189 aa10.6□□□□□ -0.71
LINC00239-201ENST00000556973 ACTRT1Q8TDG2 376 aa10.6□□□□□ -0.71
LINC00239-201ENST00000556973 GLYATL1Q969I3 302 aa10.6□□□□□ -0.71
LINC00239-201ENST00000556973 MS4A14Q96JA4 679 aa10.6□□□□□ -0.71
LINC00239-201ENST00000556973 IL26Q9NPH9 171 aa10.6□□□□□ -0.71
LINC00239-201ENST00000556973 RAB6BQ9NRW1 208 aa10.6□□□□□ -0.71
LINC00239-201ENST00000556973 GPSM3Q9Y4H4 160 aa10.6□□□□□ -0.71
LINC00239-201ENST00000556973 ARL5AQ9Y689 179 aa10.6□□□□□ -0.71
LINC00239-201ENST00000556973 GLYATL1P3A0A0U1RQE8 302 aa10.59□□□□□ -0.71
LINC00239-201ENST00000556973 GPR89AB7ZAQ6 455 aa10.59□□□□□ -0.71
LINC00239-201ENST00000556973 E7EVH7 732 aa10.59□□□□□ -0.71
LINC00239-201ENST00000556973 PGRMC1O00264 195 aaKnown RBP10.59□□□□□ -0.71
LINC00239-201ENST00000556973 BUD23O43709 281 aaKnown RBP10.59□□□□□ -0.71
LINC00239-201ENST00000556973 HYAL3O43820 417 aaPredicted RBP10.59□□□□□ -0.71
LINC00239-201ENST00000556973 VEGFDO43915 354 aa10.59□□□□□ -0.71
LINC00239-201ENST00000556973 DNAJC6O75061 913 aa10.59□□□□□ -0.71
LINC00239-201ENST00000556973 SUN1O94901 812 aa10.59□□□□□ -0.71
LINC00239-201ENST00000556973 GAS8O95995 478 aa10.59□□□□□ -0.71
LINC00239-201ENST00000556973 GP1BAP07359 652 aa10.59□□□□□ -0.71
LINC00239-201ENST00000556973 ZSCAN5DPP0CG00 497 aa10.59□□□□□ -0.71
LINC00239-201ENST00000556973 GPR89BP0CG08 455 aa10.59□□□□□ -0.71
LINC00239-201ENST00000556973 TCP1P17987 556 aaKnown RBP10.59□□□□□ -0.71
LINC00239-201ENST00000556973 HADHAP40939 763 aa10.59□□□□□ -0.71
LINC00239-201ENST00000556973 KCNJ1P48048 391 aa10.59□□□□□ -0.71
LINC00239-201ENST00000556973 GNG11P61952 73 aa10.59□□□□□ -0.71
LINC00239-201ENST00000556973 CTBSQ01459 385 aa10.59□□□□□ -0.71
LINC00239-201ENST00000556973 ILF3Q12906 894 aaKnown RBP eCLIP10.59□□□□□ -0.71
LINC00239-201ENST00000556973 SEMA5AQ13591 1074 aa10.59□□□□□ -0.71
LINC00239-201ENST00000556973 ITGA9Q13797 1035 aa10.59□□□□□ -0.71
LINC00239-201ENST00000556973 LRP8Q14114 963 aa10.59□□□□□ -0.71
LINC00239-201ENST00000556973 SMAD1Q15797 465 aaKnown RBP10.59□□□□□ -0.71
LINC00239-201ENST00000556973 ATP13A5Q4VNC0 1218 aa10.59□□□□□ -0.71
LINC00239-201ENST00000556973 CCDC157Q569K6 752 aa10.59□□□□□ -0.71
LINC00239-201ENST00000556973 OGFOD3Q6PK18 319 aa10.59□□□□□ -0.71
LINC00239-201ENST00000556973 MARK2Q7KZI7 788 aaKnown RBP10.59□□□□□ -0.71
LINC00239-201ENST00000556973 TMPRSS7Q7RTY8 843 aa10.59□□□□□ -0.71
LINC00239-201ENST00000556973 ADGRG6Q86SQ4 1221 aa10.59□□□□□ -0.71
LINC00239-201ENST00000556973 PRUNE1Q86TP1 453 aa10.59□□□□□ -0.71
LINC00239-201ENST00000556973 TRIM74Q86UV6 250 aa10.59□□□□□ -0.71
LINC00239-201ENST00000556973 GALNT13Q8IUC8 556 aa10.59□□□□□ -0.71
LINC00239-201ENST00000556973 PHYKPLQ8IUZ5 450 aa10.59□□□□□ -0.71
LINC00239-201ENST00000556973 TAB3Q8N5C8 712 aaPredicted RBP10.59□□□□□ -0.71
LINC00239-201ENST00000556973 ARL10Q8N8L6 244 aa10.59□□□□□ -0.71
LINC00239-201ENST00000556973 GLIS1Q8NBF1 620 aa10.59□□□□□ -0.71
LINC00239-201ENST00000556973 FAM46DQ8NEK8 389 aa10.59□□□□□ -0.71
LINC00239-201ENST00000556973 OR4K2Q8NGD2 314 aa10.59□□□□□ -0.71
LINC00239-201ENST00000556973 CCL4L1Q8NHW4 92 aa10.59□□□□□ -0.71
LINC00239-201ENST00000556973 COG1Q8WTW3 980 aa10.59□□□□□ -0.71
LINC00239-201ENST00000556973 PTCD2Q8WV60 388 aaKnown RBP10.59□□□□□ -0.71
LINC00239-201ENST00000556973 MAGOHBQ96A72 148 aaKnown RBP10.59□□□□□ -0.71
LINC00239-201ENST00000556973 SCNM1Q9BWG6 230 aa10.59□□□□□ -0.71
LINC00239-201ENST00000556973 AP1M1Q9BXS5 423 aa10.59□□□□□ -0.71
LINC00239-201ENST00000556973 GSDMCQ9BYG8 508 aa10.59□□□□□ -0.71
LINC00239-201ENST00000556973 DPEP2Q9H4A9 486 aa10.59□□□□□ -0.71
LINC00239-201ENST00000556973 KCND1Q9NSA2 647 aa10.59□□□□□ -0.71
LINC00239-201ENST00000556973 ATXN10Q9UBB4 475 aa10.59□□□□□ -0.71
LINC00239-201ENST00000556973 GULP1Q9UBP9 304 aa10.59□□□□□ -0.71
LINC00239-201ENST00000556973 ZNHIT2Q9UHR6 403 aa10.59□□□□□ -0.71
LINC00239-201ENST00000556973 APPL1Q9UKG1 709 aa10.59□□□□□ -0.71
LINC00239-201ENST00000556973 PADI4Q9UM07 663 aa10.59□□□□□ -0.71
LINC00239-201ENST00000556973 GPR34Q9UPC5 381 aa10.59□□□□□ -0.71
LINC00239-201ENST00000556973 NEUROG3Q9Y4Z2 214 aa10.59□□□□□ -0.71
LINC00239-201ENST00000556973 OAS3Q9Y6K5 1087 aaKnown RBP10.59□□□□□ -0.71
LINC00239-201ENST00000556973 ARID1BQ8NFD5 2236 aaPredicted RBP10.58□□□□□ -0.72
LINC00239-201ENST00000556973 LY6G6EA0A0G2JKS1 128 aa10.58□□□□□ -0.72
LINC00239-201ENST00000556973 CPED1A4D0V7 1026 aa10.58□□□□□ -0.72
LINC00239-201ENST00000556973 AP3B1O00203 1094 aa10.58□□□□□ -0.72
LINC00239-201ENST00000556973 ZNF185O15231 689 aa10.58□□□□□ -0.72
LINC00239-201ENST00000556973 GRID2O43424 1007 aa10.58□□□□□ -0.72
LINC00239-201ENST00000556973 LDB2O43679 373 aa10.58□□□□□ -0.72
LINC00239-201ENST00000556973 NUAK1O60285 661 aa10.58□□□□□ -0.72
LINC00239-201ENST00000556973 TOP3BO95985 862 aaKnown RBP10.58□□□□□ -0.72
LINC00239-201ENST00000556973 MYF5P13349 255 aa10.58□□□□□ -0.72
LINC00239-201ENST00000556973 ZNF8P17098 575 aaPredicted RBP10.58□□□□□ -0.72
LINC00239-201ENST00000556973 TPH1P17752 444 aa10.58□□□□□ -0.72
LINC00239-201ENST00000556973 CDH17Q12864 832 aa10.58□□□□□ -0.72
LINC00239-201ENST00000556973 LAMB3Q13751 1172 aa10.58□□□□□ -0.72
LINC00239-201ENST00000556973 PTPRCAPQ14761 206 aa10.58□□□□□ -0.72
LINC00239-201ENST00000556973 TCEA2Q15560 299 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms