RNA–Protein interactions for RNA: ENST00000556705.5

SRP54-AS1-204, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

TSL 2 BASIC

Gene SRP54-AS1, Length 580 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-204ENST00000556705 LRIT1Q9P2V4 623 aa13.14□□□□□ -0.31
SRP54-AS1-204ENST00000556705 TRHDEQ9UKU6 1024 aa13.14□□□□□ -0.31
SRP54-AS1-204ENST00000556705 RNF215Q9Y6U7 377 aa13.14□□□□□ -0.31
SRP54-AS1-204ENST00000556705 DDX3YO15523 660 aaKnown RBP13.13□□□□□ -0.31
SRP54-AS1-204ENST00000556705 DNAJC6O75061 913 aa13.13□□□□□ -0.31
SRP54-AS1-204ENST00000556705 TCEA3O75764 348 aa13.13□□□□□ -0.31
SRP54-AS1-204ENST00000556705 RPLP0P05388 317 aaKnown RBP13.13□□□□□ -0.31
SRP54-AS1-204ENST00000556705 RBP3P10745 1247 aa13.13□□□□□ -0.31
SRP54-AS1-204ENST00000556705 GLB1P16278 677 aa13.13□□□□□ -0.31
SRP54-AS1-204ENST00000556705 BPIP17213 487 aa13.13□□□□□ -0.31
SRP54-AS1-204ENST00000556705 CETN2P41208 172 aa13.13□□□□□ -0.31
SRP54-AS1-204ENST00000556705 PDX1P52945 283 aa13.13□□□□□ -0.31
SRP54-AS1-204ENST00000556705 EIF3EP60228 445 aaKnown RBP13.13□□□□□ -0.31
SRP54-AS1-204ENST00000556705 SPIDRQ14159 915 aa13.13□□□□□ -0.31
SRP54-AS1-204ENST00000556705 SIRPB2Q5JXA9 342 aa13.13□□□□□ -0.31
SRP54-AS1-204ENST00000556705 CERCAMQ5T4B2 595 aa13.13□□□□□ -0.31
SRP54-AS1-204ENST00000556705 ZNF648Q5T619 568 aaPredicted RBP13.13□□□□□ -0.31
SRP54-AS1-204ENST00000556705 C19orf48Q6RUI8 117 aa13.13□□□□□ -0.31
SRP54-AS1-204ENST00000556705 C17orf82Q86X59 251 aaPredicted RBP13.13□□□□□ -0.31
SRP54-AS1-204ENST00000556705 SLC25A41Q8N5S1 370 aa13.13□□□□□ -0.31
SRP54-AS1-204ENST00000556705 Q8N9G6 341 aaPredicted RBP13.13□□□□□ -0.31
SRP54-AS1-204ENST00000556705 HNRNPLLQ8WVV9 542 aaKnown RBP13.13□□□□□ -0.31
SRP54-AS1-204ENST00000556705 SPATA16Q9BXB7 569 aa13.13□□□□□ -0.31
SRP54-AS1-204ENST00000556705 CDH19Q9H159 772 aa13.13□□□□□ -0.31
SRP54-AS1-204ENST00000556705 LRRN3Q9H3W5 708 aa13.13□□□□□ -0.31
SRP54-AS1-204ENST00000556705 BPIFA1Q9NP55 256 aa13.13□□□□□ -0.31
SRP54-AS1-204ENST00000556705 VPS18Q9P253 973 aa13.13□□□□□ -0.31
SRP54-AS1-204ENST00000556705 RSPH14Q9UHP6 348 aa13.13□□□□□ -0.31
SRP54-AS1-204ENST00000556705 ZNHIT2Q9UHR6 403 aa13.13□□□□□ -0.31
SRP54-AS1-204ENST00000556705 APPL1Q9UKG1 709 aa13.13□□□□□ -0.31
SRP54-AS1-204ENST00000556705 RALYQ9UKM9 306 aaKnown RBP13.13□□□□□ -0.31
SRP54-AS1-204ENST00000556705 PRKAB1Q9Y478 270 aa13.13□□□□□ -0.31
SRP54-AS1-204ENST00000556705 CAPN6Q9Y6Q1 641 aa13.13□□□□□ -0.31
SRP54-AS1-204ENST00000556705 PKD1L2Q7Z442 2459 aa13.13□□□□□ -0.31
SRP54-AS1-204ENST00000556705 CELSR3Q9NYQ7 3312 aa13.13□□□□□ -0.31
SRP54-AS1-204ENST00000556705 LAMA5O15230 3695 aa13.12□□□□□ -0.31
SRP54-AS1-204ENST00000556705 PMS2P1A4D2B8 440 aa13.12□□□□□ -0.31
SRP54-AS1-204ENST00000556705 NUDT21O43809 227 aaKnown RBP13.12□□□□□ -0.31
SRP54-AS1-204ENST00000556705 TJP3O95049 919 aa13.12□□□□□ -0.31
SRP54-AS1-204ENST00000556705 ECEL1O95672 775 aa13.12□□□□□ -0.31
SRP54-AS1-204ENST00000556705 EPOP01588 193 aa13.12□□□□□ -0.31
SRP54-AS1-204ENST00000556705 PNLIPP16233 465 aa13.12□□□□□ -0.31
SRP54-AS1-204ENST00000556705 ACTR1BP42025 376 aa13.12□□□□□ -0.31
SRP54-AS1-204ENST00000556705 LSSP48449 732 aa13.12□□□□□ -0.31
SRP54-AS1-204ENST00000556705 DCDC1P59894 354 aa13.12□□□□□ -0.31
SRP54-AS1-204ENST00000556705 ACTR1AP61163 376 aa13.12□□□□□ -0.31
SRP54-AS1-204ENST00000556705 GABREP78334 506 aa13.12□□□□□ -0.31
SRP54-AS1-204ENST00000556705 MPP3Q13368 585 aa13.12□□□□□ -0.31
SRP54-AS1-204ENST00000556705 SLC1A5Q15758 541 aa13.12□□□□□ -0.31
SRP54-AS1-204ENST00000556705 C3orf38Q5JPI3 329 aa13.12□□□□□ -0.31
SRP54-AS1-204ENST00000556705 DARS2Q6PI48 645 aaKnown RBP13.12□□□□□ -0.31
SRP54-AS1-204ENST00000556705 B3GNT8Q7Z7M8 397 aa13.12□□□□□ -0.31
SRP54-AS1-204ENST00000556705 GALNT13Q8IUC8 556 aa13.12□□□□□ -0.31
SRP54-AS1-204ENST00000556705 CCNJLQ8IV13 435 aa13.12□□□□□ -0.31
SRP54-AS1-204ENST00000556705 CDKL3Q8IVW4 592 aaPredicted RBP13.12□□□□□ -0.31
SRP54-AS1-204ENST00000556705 SYCE1Q8N0S2 351 aa13.12□□□□□ -0.31
SRP54-AS1-204ENST00000556705 NAGSQ8N159 534 aa13.12□□□□□ -0.31
SRP54-AS1-204ENST00000556705 TXLNBQ8N3L3 684 aa13.12□□□□□ -0.31
SRP54-AS1-204ENST00000556705 ARL14Q8N4G2 192 aa13.12□□□□□ -0.31
SRP54-AS1-204ENST00000556705 TTC30BQ8N4P2 665 aa13.12□□□□□ -0.31
SRP54-AS1-204ENST00000556705 TRAM1L1Q8N609 369 aa13.12□□□□□ -0.31
SRP54-AS1-204ENST00000556705 IPMKQ8NFU5 416 aa13.12□□□□□ -0.31
SRP54-AS1-204ENST00000556705 WDR48Q8TAF3 677 aa13.12□□□□□ -0.31
SRP54-AS1-204ENST00000556705 GFM1Q96RP9 751 aaKnown RBP13.12□□□□□ -0.31
SRP54-AS1-204ENST00000556705 SRPK1Q96SB4 655 aaKnown RBP13.12□□□□□ -0.31
SRP54-AS1-204ENST00000556705 GBA3Q9H227 469 aa13.12□□□□□ -0.31
SRP54-AS1-204ENST00000556705 POLR1BQ9H9Y6 1135 aa13.12□□□□□ -0.31
SRP54-AS1-204ENST00000556705 ATXN10Q9UBB4 475 aa13.12□□□□□ -0.31
SRP54-AS1-204ENST00000556705 NFKBIL1Q9UBC1 381 aaPredicted RBP13.12□□□□□ -0.31
SRP54-AS1-204ENST00000556705 SATB2Q9UPW6 733 aa13.12□□□□□ -0.31
SRP54-AS1-204ENST00000556705 ADGRG1Q9Y653 693 aa13.12□□□□□ -0.31
SRP54-AS1-204ENST00000556705 DSPP15924 2871 aaKnown RBP13.11□□□□□ -0.31
SRP54-AS1-204ENST00000556705 ZNF106Q9H2Y7 1883 aaKnown RBP13.11□□□□□ -0.31
SRP54-AS1-204ENST00000556705 TRBV23OR9-2A0A075B6M9 112 aa13.11□□□□□ -0.31
SRP54-AS1-204ENST00000556705 GOLGA6L6A8MZA4 724 aa13.11□□□□□ -0.31
SRP54-AS1-204ENST00000556705 MIF4GDA9UHW6 222 aaKnown RBP13.11□□□□□ -0.31
SRP54-AS1-204ENST00000556705 KCNN4O15554 427 aa13.11□□□□□ -0.31
SRP54-AS1-204ENST00000556705 B4GAT1O43505 415 aa13.11□□□□□ -0.31
SRP54-AS1-204ENST00000556705 AGTP01019 485 aa13.11□□□□□ -0.31
SRP54-AS1-204ENST00000556705 EIF2S3P41091 472 aaKnown RBP13.11□□□□□ -0.31
SRP54-AS1-204ENST00000556705 GSDMDP57764 484 aa13.11□□□□□ -0.31
SRP54-AS1-204ENST00000556705 B4GALNT1Q00973 533 aa13.11□□□□□ -0.31
SRP54-AS1-204ENST00000556705 ANKRD20A2Q5SQ80 823 aa13.11□□□□□ -0.31
SRP54-AS1-204ENST00000556705 ANKRD20A1Q5TYW2 823 aa13.11□□□□□ -0.31
SRP54-AS1-204ENST00000556705 ANKRD20A3Q5VUR7 823 aa13.11□□□□□ -0.31
SRP54-AS1-204ENST00000556705 CHST15Q7LFX5 561 aaPredicted RBP13.11□□□□□ -0.31
SRP54-AS1-204ENST00000556705 SPRED1Q7Z699 444 aa13.11□□□□□ -0.31
SRP54-AS1-204ENST00000556705 RNF10Q8N5U6 811 aaKnown RBP13.11□□□□□ -0.31
SRP54-AS1-204ENST00000556705 UBL4BQ8N7F7 174 aa13.11□□□□□ -0.31
SRP54-AS1-204ENST00000556705 FGF11Q92914 225 aa13.11□□□□□ -0.31
SRP54-AS1-204ENST00000556705 PRR11Q96HE9 360 aaPredicted RBP13.11□□□□□ -0.31
SRP54-AS1-204ENST00000556705 MS4A3Q96HJ5 214 aa13.11□□□□□ -0.31
SRP54-AS1-204ENST00000556705 HES6Q96HZ4 224 aa13.11□□□□□ -0.31
SRP54-AS1-204ENST00000556705 ZSCAN5AQ9BUG6 496 aa13.11□□□□□ -0.31
SRP54-AS1-204ENST00000556705 RAD18Q9NS91 495 aa13.11□□□□□ -0.31
SRP54-AS1-204ENST00000556705 TMPRSS11EQ9UL52 423 aa13.11□□□□□ -0.31
SRP54-AS1-204ENST00000556705 ATXN7L1Q9ULK2 861 aaPredicted RBP13.11□□□□□ -0.31
SRP54-AS1-204ENST00000556705 A0A087WV48 116 aa13.1□□□□□ -0.31
SRP54-AS1-204ENST00000556705 TCRBV7S2A1N4TA0A589 114 aa13.1□□□□□ -0.31
SRP54-AS1-204ENST00000556705 D6RAR5 112 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms