RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 PDE2AO00408 941 aaPredicted RBP9.59□□□□□ -0.87
SRP54-210ENST00000556380 SCAMP1O15126 338 aa9.59□□□□□ -0.87
SRP54-210ENST00000556380 PSMD3O43242 534 aa9.59□□□□□ -0.87
SRP54-210ENST00000556380 SDC3O75056 442 aa9.59□□□□□ -0.87
SRP54-210ENST00000556380 SUN1O94901 812 aa9.59□□□□□ -0.87
SRP54-210ENST00000556380 DKK1O94907 266 aa9.59□□□□□ -0.87
SRP54-210ENST00000556380 IFNB1P01574 187 aa9.59□□□□□ -0.87
SRP54-210ENST00000556380 PYGLP06737 847 aa9.59□□□□□ -0.87
SRP54-210ENST00000556380 PSMA3P25788 255 aa9.59□□□□□ -0.87
SRP54-210ENST00000556380 HTR1BP28222 390 aa9.59□□□□□ -0.87
SRP54-210ENST00000556380 FDFT1P37268 417 aa9.59□□□□□ -0.87
SRP54-210ENST00000556380 GPR1P46091 355 aa9.59□□□□□ -0.87
SRP54-210ENST00000556380 HK3P52790 923 aa9.59□□□□□ -0.87
SRP54-210ENST00000556380 PPARDQ03181 441 aa9.59□□□□□ -0.87
SRP54-210ENST00000556380 SEMA5AQ13591 1074 aa9.59□□□□□ -0.87
SRP54-210ENST00000556380 TRIP6Q15654 476 aaKnown RBP9.59□□□□□ -0.87
SRP54-210ENST00000556380 PPM1JQ5JR12 505 aa9.59□□□□□ -0.87
SRP54-210ENST00000556380 RAET1GQ6H3X3 334 aa9.59□□□□□ -0.87
SRP54-210ENST00000556380 TRIM46Q7Z4K8 759 aa9.59□□□□□ -0.87
SRP54-210ENST00000556380 CREG2Q8IUH2 290 aa9.59□□□□□ -0.87
SRP54-210ENST00000556380 EID2Q8N6I1 236 aa9.59□□□□□ -0.87
SRP54-210ENST00000556380 ZNF548Q8NEK5 533 aaPredicted RBP9.59□□□□□ -0.87
SRP54-210ENST00000556380 OR56A4Q8NGH8 313 aa9.59□□□□□ -0.87
SRP54-210ENST00000556380 ATL2Q8NHH9 583 aa9.59□□□□□ -0.87
SRP54-210ENST00000556380 BRSK1Q8TDC3 778 aa9.59□□□□□ -0.87
SRP54-210ENST00000556380 BTN2A2Q8WVV5 523 aa9.59□□□□□ -0.87
SRP54-210ENST00000556380 CDC6Q99741 560 aa9.59□□□□□ -0.87
SRP54-210ENST00000556380 TBL1YQ9BQ87 522 aa9.59□□□□□ -0.87
SRP54-210ENST00000556380 LRRC61Q9BV99 259 aa9.59□□□□□ -0.87
SRP54-210ENST00000556380 FSD1LQ9BXM9 530 aa9.59□□□□□ -0.87
SRP54-210ENST00000556380 AP1M1Q9BXS5 423 aa9.59□□□□□ -0.87
SRP54-210ENST00000556380 SLC32A1Q9H598 525 aa9.59□□□□□ -0.87
SRP54-210ENST00000556380 LRRC40Q9H9A6 602 aa9.59□□□□□ -0.87
SRP54-210ENST00000556380 IL26Q9NPH9 171 aa9.59□□□□□ -0.87
SRP54-210ENST00000556380 PHPT1Q9NRX4 125 aaPredicted RBP9.59□□□□□ -0.87
SRP54-210ENST00000556380 RAD18Q9NS91 495 aa9.59□□□□□ -0.87
SRP54-210ENST00000556380 PAK5Q9P286 719 aa9.59□□□□□ -0.87
SRP54-210ENST00000556380 FEZ2Q9UHY8 353 aaPredicted RBP9.59□□□□□ -0.87
SRP54-210ENST00000556380 ACACBO00763 2458 aa9.59□□□□□ -0.87
SRP54-210ENST00000556380 AKAP13Q12802 2813 aa9.59□□□□□ -0.87
SRP54-210ENST00000556380 SPEGQ15772 3267 aa9.58□□□□□ -0.88
SRP54-210ENST00000556380 LY6G6EA0A0G2JKS1 128 aa9.58□□□□□ -0.88
SRP54-210ENST00000556380 ERI2A8K979 691 aaKnown RBP9.58□□□□□ -0.88
SRP54-210ENST00000556380 PGRMC1O00264 195 aaKnown RBP9.58□□□□□ -0.88
SRP54-210ENST00000556380 GAPDHSO14556 408 aaPredicted RBP9.58□□□□□ -0.88
SRP54-210ENST00000556380 TERTO14746 1132 aaKnown RBP9.58□□□□□ -0.88
SRP54-210ENST00000556380 TPP1O14773 563 aa9.58□□□□□ -0.88
SRP54-210ENST00000556380 YY2O15391 372 aa9.58□□□□□ -0.88
SRP54-210ENST00000556380 AQP9O43315 295 aa9.58□□□□□ -0.88
SRP54-210ENST00000556380 LDB2O43679 373 aa9.58□□□□□ -0.88
SRP54-210ENST00000556380 SIGLEC6O43699 453 aa9.58□□□□□ -0.88
SRP54-210ENST00000556380 RASGRP1O95267 797 aa9.58□□□□□ -0.88
SRP54-210ENST00000556380 CELA2BP08218 269 aaPredicted RBP9.58□□□□□ -0.88
SRP54-210ENST00000556380 TCP1P17987 556 aaKnown RBP9.58□□□□□ -0.88
SRP54-210ENST00000556380 KELP23276 732 aa9.58□□□□□ -0.88
SRP54-210ENST00000556380 CA5AP35218 305 aa9.58□□□□□ -0.88
SRP54-210ENST00000556380 COILP38432 576 aaPredicted RBP9.58□□□□□ -0.88
SRP54-210ENST00000556380 GRIA1P42261 906 aa9.58□□□□□ -0.88
SRP54-210ENST00000556380 TNNT3P45378 269 aaPredicted RBP9.58□□□□□ -0.88
SRP54-210ENST00000556380 POLD2P49005 469 aa9.58□□□□□ -0.88
SRP54-210ENST00000556380 BLKP51451 505 aa9.58□□□□□ -0.88
SRP54-210ENST00000556380 C1orf61Q13536 156 aa9.58□□□□□ -0.88
SRP54-210ENST00000556380 PTPRCAPQ14761 206 aa9.58□□□□□ -0.88
SRP54-210ENST00000556380 TAF1AQ15573 450 aaPredicted RBP9.58□□□□□ -0.88
SRP54-210ENST00000556380 KCTD19Q17RG1 926 aaPredicted RBP9.58□□□□□ -0.88
SRP54-210ENST00000556380 PRRT3Q5FWE3 981 aa9.58□□□□□ -0.88
SRP54-210ENST00000556380 N4BP2L1Q5TBK1 243 aaPredicted RBP9.58□□□□□ -0.88
SRP54-210ENST00000556380 C4orf22Q6V702 233 aa9.58□□□□□ -0.88
SRP54-210ENST00000556380 ERMP1Q7Z2K6 904 aa9.58□□□□□ -0.88
SRP54-210ENST00000556380 SLCO6A1Q86UG4 719 aa9.58□□□□□ -0.88
SRP54-210ENST00000556380 HID1Q8IV36 788 aa9.58□□□□□ -0.88
SRP54-210ENST00000556380 TAB3Q8N5C8 712 aaPredicted RBP9.58□□□□□ -0.88
SRP54-210ENST00000556380 TRAM1L1Q8N609 369 aa9.58□□□□□ -0.88
SRP54-210ENST00000556380 CCDC89Q8N998 374 aa9.58□□□□□ -0.88
SRP54-210ENST00000556380 FAM181AQ8N9Y4 354 aa9.58□□□□□ -0.88
SRP54-210ENST00000556380 OR4C6Q8NH72 309 aa9.58□□□□□ -0.88
SRP54-210ENST00000556380 BLOC1S5Q8TDH9 187 aa9.58□□□□□ -0.88
SRP54-210ENST00000556380 MAGOHBQ96A72 148 aaKnown RBP9.58□□□□□ -0.88
SRP54-210ENST00000556380 PDXPQ96GD0 296 aa9.58□□□□□ -0.88
SRP54-210ENST00000556380 HIC2Q96JB3 615 aa9.58□□□□□ -0.88
SRP54-210ENST00000556380 PLEKHG4BQ96PX9 1271 aa9.58□□□□□ -0.88
SRP54-210ENST00000556380 NAP1L3Q99457 506 aaPredicted RBP9.58□□□□□ -0.88
SRP54-210ENST00000556380 NAPGQ99747 312 aaPredicted RBP9.58□□□□□ -0.88
SRP54-210ENST00000556380 C19orf43Q9BQ61 176 aa9.58□□□□□ -0.88
SRP54-210ENST00000556380 ZSCAN5AQ9BUG6 496 aa9.58□□□□□ -0.88
SRP54-210ENST00000556380 SLC13A1Q9BZW2 595 aa9.58□□□□□ -0.88
SRP54-210ENST00000556380 BPIFA1Q9NP55 256 aa9.58□□□□□ -0.88
SRP54-210ENST00000556380 MRPL40Q9NQ50 206 aaKnown RBP9.58□□□□□ -0.88
SRP54-210ENST00000556380 RAB6BQ9NRW1 208 aa9.58□□□□□ -0.88
SRP54-210ENST00000556380 NLGN3Q9NZ94 848 aa9.58□□□□□ -0.88
SRP54-210ENST00000556380 SPASTQ9UBP0 616 aa9.58□□□□□ -0.88
SRP54-210ENST00000556380 KLQ9UEF7 1012 aa9.58□□□□□ -0.88
SRP54-210ENST00000556380 APOBEC3BQ9UH17 382 aaKnown RBP9.58□□□□□ -0.88
SRP54-210ENST00000556380 WASF3Q9UPY6 502 aa9.58□□□□□ -0.88
SRP54-210ENST00000556380 TMEM98Q9Y2Y6 226 aa9.58□□□□□ -0.88
SRP54-210ENST00000556380 KCTD3Q9Y597 815 aa9.58□□□□□ -0.88
SRP54-210ENST00000556380 ST14Q9Y5Y6 855 aa9.58□□□□□ -0.88
SRP54-210ENST00000556380 ARL5AQ9Y689 179 aa9.58□□□□□ -0.88
SRP54-210ENST00000556380 OAS3Q9Y6K5 1087 aaKnown RBP9.58□□□□□ -0.88
SRP54-210ENST00000556380 U3KQA8 63 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms