RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 QPCTQ16769 361 aa12.6□□□□□ -0.39
HNRNPC-221ENST00000555883 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.6□□□□□ -0.39
HNRNPC-221ENST00000555883 PDPK2PQ6A1A2 396 aa12.6□□□□□ -0.39
HNRNPC-221ENST00000555883 DOK6Q6PKX4 331 aa12.6□□□□□ -0.39
HNRNPC-221ENST00000555883 VSTM4Q8IW00 320 aa12.6□□□□□ -0.39
HNRNPC-221ENST00000555883 AVL9Q8NBF6 648 aa12.6□□□□□ -0.39
HNRNPC-221ENST00000555883 TADA1Q96BN2 335 aa12.6□□□□□ -0.39
HNRNPC-221ENST00000555883 IMP4Q96G21 291 aaKnown RBP12.6□□□□□ -0.39
HNRNPC-221ENST00000555883 CCDC42Q96M95 316 aa12.6□□□□□ -0.39
HNRNPC-221ENST00000555883 SMIM14Q96QK8 99 aa12.6□□□□□ -0.39
HNRNPC-221ENST00000555883 TRIB3Q96RU7 358 aa12.6□□□□□ -0.39
HNRNPC-221ENST00000555883 AGAP2Q99490 1192 aa12.6□□□□□ -0.39
HNRNPC-221ENST00000555883 NUDT22Q9BRQ3 303 aa12.6□□□□□ -0.39
HNRNPC-221ENST00000555883 ANP32EQ9BTT0 268 aa12.6□□□□□ -0.39
HNRNPC-221ENST00000555883 MAGEE1Q9HCI5 957 aa12.6□□□□□ -0.39
HNRNPC-221ENST00000555883 SARS2Q9NP81 518 aaKnown RBP12.6□□□□□ -0.39
HNRNPC-221ENST00000555883 RAD18Q9NS91 495 aa12.6□□□□□ -0.39
HNRNPC-221ENST00000555883 CNOT6Q9ULM6 557 aaKnown RBP12.6□□□□□ -0.39
HNRNPC-221ENST00000555883 TMEM98Q9Y2Y6 226 aa12.6□□□□□ -0.39
HNRNPC-221ENST00000555883 PCDHB11Q9Y5F2 797 aa12.6□□□□□ -0.39
HNRNPC-221ENST00000555883 SCN8AQ9UQD0 1980 aa12.6□□□□□ -0.39
HNRNPC-221ENST00000555883 APOL1O14791 398 aa12.59□□□□□ -0.39
HNRNPC-221ENST00000555883 MFAP3LO75121 409 aa12.59□□□□□ -0.39
HNRNPC-221ENST00000555883 THRAP10827 490 aa12.59□□□□□ -0.39
HNRNPC-221ENST00000555883 ETV5P41161 510 aa12.59□□□□□ -0.39
HNRNPC-221ENST00000555883 NR2C2P49116 596 aa12.59□□□□□ -0.39
HNRNPC-221ENST00000555883 CLCNKAP51800 687 aa12.59□□□□□ -0.39
HNRNPC-221ENST00000555883 EPHA4P54764 986 aa12.59□□□□□ -0.39
HNRNPC-221ENST00000555883 ZBTB17Q13105 803 aa12.59□□□□□ -0.39
HNRNPC-221ENST00000555883 AMZ1Q400G9 498 aa12.59□□□□□ -0.39
HNRNPC-221ENST00000555883 ZFYVE27Q5T4F4 411 aa12.59□□□□□ -0.39
HNRNPC-221ENST00000555883 TMEM71Q6P5X7 295 aa12.59□□□□□ -0.39
HNRNPC-221ENST00000555883 WDR74Q6RFH5 385 aaPredicted RBP12.59□□□□□ -0.39
HNRNPC-221ENST00000555883 BZW1Q7L1Q6 419 aaKnown RBP12.59□□□□□ -0.39
HNRNPC-221ENST00000555883 ZNF605Q86T29 641 aa12.59□□□□□ -0.39
HNRNPC-221ENST00000555883 TRIM74Q86UV6 250 aa12.59□□□□□ -0.39
HNRNPC-221ENST00000555883 AGBL5Q8NDL9 886 aa12.59□□□□□ -0.39
HNRNPC-221ENST00000555883 CCDC112Q8NEF3 446 aa12.59□□□□□ -0.39
HNRNPC-221ENST00000555883 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.59□□□□□ -0.39
HNRNPC-221ENST00000555883 SLC37A2Q8TED4 501 aa12.59□□□□□ -0.39
HNRNPC-221ENST00000555883 PATE1Q8WXA2 126 aa12.59□□□□□ -0.39
HNRNPC-221ENST00000555883 USP7Q93009 1102 aa12.59□□□□□ -0.39
HNRNPC-221ENST00000555883 SH3KBP1Q96B97 665 aa12.59□□□□□ -0.39
HNRNPC-221ENST00000555883 SGF29Q96ES7 293 aa12.59□□□□□ -0.39
HNRNPC-221ENST00000555883 MED8Q96G25 268 aa12.59□□□□□ -0.39
HNRNPC-221ENST00000555883 CCDC74BQ96LY2 380 aa12.59□□□□□ -0.39
HNRNPC-221ENST00000555883 TAAR9Q96RI9 348 aa12.59□□□□□ -0.39
HNRNPC-221ENST00000555883 HERPUD2Q9BSE4 406 aa12.59□□□□□ -0.39
HNRNPC-221ENST00000555883 ZSCAN5AQ9BUG6 496 aa12.59□□□□□ -0.39
HNRNPC-221ENST00000555883 DDA1Q9BW61 102 aa12.59□□□□□ -0.39
HNRNPC-221ENST00000555883 MAK16Q9BXY0 300 aaKnown RBP12.59□□□□□ -0.39
HNRNPC-221ENST00000555883 SLC25A51Q9H1U9 297 aa12.59□□□□□ -0.39
HNRNPC-221ENST00000555883 CARD9Q9H257 536 aa12.59□□□□□ -0.39
HNRNPC-221ENST00000555883 EPB41L1Q9H4G0 881 aa12.59□□□□□ -0.39
HNRNPC-221ENST00000555883 STN1Q9H668 368 aaKnown RBP12.59□□□□□ -0.39
HNRNPC-221ENST00000555883 SUDS3Q9H7L9 328 aaPredicted RBP12.59□□□□□ -0.39
HNRNPC-221ENST00000555883 NHEJ1Q9H9Q4 299 aaPredicted RBP12.59□□□□□ -0.39
HNRNPC-221ENST00000555883 ZFYVE1Q9HBF4 777 aa12.59□□□□□ -0.39
HNRNPC-221ENST00000555883 DDX56Q9NY93 547 aaKnown RBP12.59□□□□□ -0.39
HNRNPC-221ENST00000555883 KCNK4Q9NYG8 393 aa12.59□□□□□ -0.39
HNRNPC-221ENST00000555883 FOXJ2Q9P0K8 574 aa12.59□□□□□ -0.39
HNRNPC-221ENST00000555883 HEY1Q9Y5J3 304 aa12.59□□□□□ -0.39
HNRNPC-221ENST00000555883 ZNF462Q96JM2 2506 aa12.58□□□□□ -0.4
HNRNPC-221ENST00000555883 KIF26BQ2KJY2 2108 aa12.58□□□□□ -0.4
HNRNPC-221ENST00000555883 KIR2DS5A0A0G2JLQ3 304 aa12.58□□□□□ -0.4
HNRNPC-221ENST00000555883 A0A0G2JNG1 304 aa12.58□□□□□ -0.4
HNRNPC-221ENST00000555883 A6NCN8 305 aa12.58□□□□□ -0.4
HNRNPC-221ENST00000555883 OR5K4A6NMS3 321 aa12.58□□□□□ -0.4
HNRNPC-221ENST00000555883 FADS2P1A8MWK0 482 aa12.58□□□□□ -0.4
HNRNPC-221ENST00000555883 B4E171 279 aa12.58□□□□□ -0.4
HNRNPC-221ENST00000555883 STMND1H3BQB6 276 aa12.58□□□□□ -0.4
HNRNPC-221ENST00000555883 KIR2DS3K7RE56 304 aa12.58□□□□□ -0.4
HNRNPC-221ENST00000555883 INPP4BO15327 924 aa12.58□□□□□ -0.4
HNRNPC-221ENST00000555883 DUX1O43812 170 aa12.58□□□□□ -0.4
HNRNPC-221ENST00000555883 NUAK1O60285 661 aa12.58□□□□□ -0.4
HNRNPC-221ENST00000555883 PLA2G2AP14555 144 aa12.58□□□□□ -0.4
HNRNPC-221ENST00000555883 CSF2RBP32927 897 aa12.58□□□□□ -0.4
HNRNPC-221ENST00000555883 TSPAN7P41732 249 aa12.58□□□□□ -0.4
HNRNPC-221ENST00000555883 HADHBP55084 474 aaKnown RBP12.58□□□□□ -0.4
HNRNPC-221ENST00000555883 RAB15P59190 212 aa12.58□□□□□ -0.4
HNRNPC-221ENST00000555883 KIR2DS5Q14953 304 aa12.58□□□□□ -0.4
HNRNPC-221ENST00000555883 TAZQ16635 292 aa12.58□□□□□ -0.4
HNRNPC-221ENST00000555883 IYDQ6PHW0 289 aa12.58□□□□□ -0.4
HNRNPC-221ENST00000555883 USP53Q70EK8 1073 aa12.58□□□□□ -0.4
HNRNPC-221ENST00000555883 LYSMD3Q7Z3D4 306 aa12.58□□□□□ -0.4
HNRNPC-221ENST00000555883 NT5DC3Q86UY8 548 aa12.58□□□□□ -0.4
HNRNPC-221ENST00000555883 CNGA4Q8IV77 575 aa12.58□□□□□ -0.4
HNRNPC-221ENST00000555883 RHOT1Q8IXI2 618 aa12.58□□□□□ -0.4
HNRNPC-221ENST00000555883 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.58□□□□□ -0.4
HNRNPC-221ENST00000555883 OR10G6Q8NH81 332 aa12.58□□□□□ -0.4
HNRNPC-221ENST00000555883 EID2BQ96D98 161 aa12.58□□□□□ -0.4
HNRNPC-221ENST00000555883 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.58□□□□□ -0.4
HNRNPC-221ENST00000555883 ASPSCR1Q9BZE9 553 aa12.58□□□□□ -0.4
HNRNPC-221ENST00000555883 ZNHIT2Q9UHR6 403 aa12.58□□□□□ -0.4
HNRNPC-221ENST00000555883 PLEKHM1Q9Y4G2 1056 aa12.58□□□□□ -0.4
HNRNPC-221ENST00000555883 ADGRG1Q9Y653 693 aa12.58□□□□□ -0.4
HNRNPC-221ENST00000555883 OAS3Q9Y6K5 1087 aaKnown RBP12.58□□□□□ -0.4
HNRNPC-221ENST00000555883 ARHGEF17Q96PE2 2063 aaPredicted RBP12.57□□□□□ -0.4
HNRNPC-221ENST00000555883 BOD1L1Q8NFC6 3051 aa12.57□□□□□ -0.4
HNRNPC-221ENST00000555883 CHUKO15111 745 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms