RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-222	ENST00000555506		M0QZ24	198 aa		4.38	□□□□□ -1.71
KTN1-222	ENST00000555506	TIMM23	O14925	209 aa		4.38	□□□□□ -1.71
KTN1-222	ENST00000555506	SOX30	O94993	753 aa		4.38	□□□□□ -1.71
KTN1-222	ENST00000555506	HSPA4L	O95757	839 aa		4.38	□□□□□ -1.71
KTN1-222	ENST00000555506	AFP	P02771	609 aa	Known RBP	4.38	□□□□□ -1.71
KTN1-222	ENST00000555506	PRF1	P14222	555 aa		4.38	□□□□□ -1.71
KTN1-222	ENST00000555506	HNRNPH1	P31943	449 aa	Known RBP	4.38	□□□□□ -1.71
KTN1-222	ENST00000555506	MSH2	P43246	934 aa		4.38	□□□□□ -1.71
KTN1-222	ENST00000555506	MMP13	P45452	471 aa		4.38	□□□□□ -1.71
KTN1-222	ENST00000555506	ENTPD1	P49961	510 aa		4.38	□□□□□ -1.71
KTN1-222	ENST00000555506	TMF1	P82094	1093 aa		4.38	□□□□□ -1.71
KTN1-222	ENST00000555506	PLCB4	Q15147	1175 aa		4.38	□□□□□ -1.71
KTN1-222	ENST00000555506	ETFDH	Q16134	617 aa		4.38	□□□□□ -1.71
KTN1-222	ENST00000555506	TAOK1	Q7L7X3	1001 aa		4.38	□□□□□ -1.71
KTN1-222	ENST00000555506	NANOGP1	Q8N7R0	232 aa		4.38	□□□□□ -1.71
KTN1-222	ENST00000555506	MIGA1	Q8NAN2	632 aa		4.38	□□□□□ -1.71
KTN1-222	ENST00000555506	SCARB1	Q8WTV0	552 aa		4.38	□□□□□ -1.71
KTN1-222	ENST00000555506	ZNF653	Q96CK0	615 aa		4.38	□□□□□ -1.71
KTN1-222	ENST00000555506	LRFN5	Q96NI6	719 aa		4.38	□□□□□ -1.71
KTN1-222	ENST00000555506	CCDC106	Q9BWC9	280 aa		4.38	□□□□□ -1.71
KTN1-222	ENST00000555506	RTN4R	Q9BZR6	473 aa		4.38	□□□□□ -1.71
KTN1-222	ENST00000555506	MMP25	Q9NPA2	562 aa		4.38	□□□□□ -1.71
KTN1-222	ENST00000555506	IL36RN	Q9UBH0	155 aa		4.38	□□□□□ -1.71
KTN1-222	ENST00000555506	DNAJB4	Q9UDY4	337 aa		4.38	□□□□□ -1.71
KTN1-222	ENST00000555506	NOL7	Q9UMY1	257 aa	Known RBP	4.38	□□□□□ -1.71
KTN1-222	ENST00000555506	CDC14A	Q9UNH5	594 aa		4.38	□□□□□ -1.71
KTN1-222	ENST00000555506	ZNF148	Q9UQR1	794 aa		4.38	□□□□□ -1.71
KTN1-222	ENST00000555506	PAM16	Q9Y3D7	125 aa		4.38	□□□□□ -1.71
KTN1-222	ENST00000555506	CCL27	Q9Y4X3	112 aa		4.38	□□□□□ -1.71
KTN1-222	ENST00000555506	GPR75-ASB3	A0A0A6YYF3	556 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	CPED1	A4D0V7	1026 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506		H0YGN5	161 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	VWA5A	O00534	786 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	ZIC3	O60481	467 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	PSMD10	O75832	226 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	GGPS1	O95749	300 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	RPN1	P04843	607 aa	Known RBP	4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	CYP1A2	P05177	515 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	NAGA	P17050	411 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	TNFRSF1B	P20333	461 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	ALCAM	Q13740	583 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	CTTN	Q14247	550 aa	Known RBP	4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	EFNB3	Q15768	340 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	ODF3L2	Q3SX64	289 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	ZNF628	Q5EBL2	1059 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	KRT80	Q6KB66	452 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	C11orf87	Q6NUJ2	197 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506		Q6ZTK2	550 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	SLFN11	Q7Z7L1	901 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	DSEL	Q8IZU8	1212 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	GUF1	Q8N442	669 aa	Known RBP	4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	ZNF548	Q8NEK5	533 aa	Predicted RBP	4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	OR1J2	Q8NGS2	313 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	GSDMB	Q8TAX9	411 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	APBB2	Q92870	758 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	SLC25A28	Q96A46	364 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	VPS33A	Q96AX1	596 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	NLRP4	Q96MN2	994 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	DACH2	Q96NX9	599 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	MMTAG2	Q9BU76	263 aa	Known RBP	4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	EDEM3	Q9BZQ6	932 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	MMP27	Q9H306	513 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	DNAJC18	Q9H819	358 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	PLAC1	Q9HBJ0	212 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	CNGB3	Q9NQW8	809 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	ZBTB40	Q9NUA8	1239 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	WDR35	Q9P2L0	1181 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	STK39	Q9UEW8	545 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	WBP11	Q9Y2W2	641 aa	Known RBP	4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	TCRBV21S2A2	A0A5A6	115 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	TRBC2	A0A5B9	178 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	BECN2	A8MW95	431 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	HSPA12A	O43301	675 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	PLRG1	O43660	514 aa	Known RBP	4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	TBCA	O75347	108 aa	Known RBP	4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	RSL1D1	O76021	490 aa	Known RBP	4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	SYF2	O95926	243 aa	Known RBP	4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	EGF	P01133	1207 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	GH2	P01242	217 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	LCAT	P04180	440 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	PRLR	P16471	622 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	CPT2	P23786	658 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	RFX5	P48382	616 aa	Predicted RBP	4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	ARSE	P51690	589 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	ZNF41	P51814	821 aa	Predicted RBP	4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	CSNK2A1	P68400	391 aa	Predicted RBP	4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	SPOCK1	Q08629	439 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	TRAF1	Q13077	416 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	HNF4G	Q14541	408 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	CRY2	Q49AN0	593 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	CCDC184	Q52MB2	194 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	OTUD1	Q5VV17	481 aa	Predicted RBP	4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	MRPL10	Q7Z7H8	261 aa	Known RBP	4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	CSNK2A3	Q8NEV1	391 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	HM13	Q8TCT9	377 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	LPGAT1	Q92604	370 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	RPL36AL	Q969Q0	106 aa	Known RBP	4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	PTER	Q96BW5	349 aa		4.37	□□□□□ -1.71

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