RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 ARPC2O15144 300 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 CHRNA1P02708 482 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 TPH1P17752 444 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 TYMPP19971 482 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 RPL10P27635 214 aaKnown RBP10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 EEF1DP29692 281 aaKnown RBP10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 SLC26A3P40879 764 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 ABCG1P45844 678 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 SLC12A2P55011 1212 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 GRIK2Q13002 908 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 TAF1CQ15572 869 aaPredicted RBP10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 SLC14A2Q15849 920 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 BTBD8Q5XKL5 378 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 PROSER1Q86XN7 944 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 SPPL2CQ8IUH8 684 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 FUNDC1Q8IVP5 155 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 ARHGAP12Q8IWW6 846 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 NUP205Q92621 2012 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 LPPQ93052 612 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 MOCOSQ96EN8 888 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 TSPAN17Q96FV3 270 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 CELF6Q96J87 481 aaKnown RBP10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 CTRCQ99895 268 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 APOL2Q9BQE5 337 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 SMOC2Q9H3U7 446 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 ARMC7Q9H6L4 198 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 RMND5AQ9H871 391 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 FANCEQ9HB96 536 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 SPC25Q9HBM1 224 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 AKIP1Q9NQ31 210 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 TMEM45AQ9NWC5 275 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 TMEM98Q9Y2Y6 226 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 TRAF6Q9Y4K3 522 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 TLL2Q9Y6L7 1015 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 TCRBV5S2A0A599 114 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 A8MT66 165 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 UBXN8O00124 270 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 VPS4BO75351 444 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 B3GAT3O94766 335 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 PABPC1P11940 636 aaKnown RBP10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 EEFSECP57772 596 aaKnown RBP10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 NFKB2Q00653 900 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 GNA12Q03113 381 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 TRIM32Q13049 653 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 TUSC3Q13454 348 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 ACAP2Q15057 778 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 CRY1Q16526 586 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 FXNQ16595 210 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 CLPPQ16740 277 aaPredicted RBP10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 GNASQ5JWF2 1037 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 MANEALQ5VSG8 457 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 XAF1Q6GPH4 301 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 THOC7Q6I9Y2 204 aaKnown RBP10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 C17orf99Q6UX52 265 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 OTOP3Q7RTS5 596 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 GALNT7Q86SF2 657 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 CPNE9Q8IYJ1 553 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 MIER2Q8N344 545 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 C2CD4AQ8NCU7 369 aaPredicted RBP10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 HEXDCQ8WVB3 486 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 FATE1Q969F0 183 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 MAP10Q9P2G4 905 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 ANKMY1Q9P2S6 941 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 CACNG4Q9UBN1 327 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 NEU3Q9UQ49 428 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 PCDHA9Q9Y5H5 950 aa10.65□□□□□ -0.7
MTHFD1-210ENST00000555252 WASH4PA8MWX3 477 aa10.64□□□□□ -0.71
MTHFD1-210ENST00000555252 FXYD1O00168 92 aa10.64□□□□□ -0.71
MTHFD1-210ENST00000555252 AREL1O15033 823 aa10.64□□□□□ -0.71
MTHFD1-210ENST00000555252 MAFKO60675 156 aa10.64□□□□□ -0.71
MTHFD1-210ENST00000555252 TULP3O75386 442 aa10.64□□□□□ -0.71
MTHFD1-210ENST00000555252 PAGE1O75459 146 aa10.64□□□□□ -0.71
MTHFD1-210ENST00000555252 NPPAP01160 153 aa10.64□□□□□ -0.71
MTHFD1-210ENST00000555252 FGF4P08620 206 aa10.64□□□□□ -0.71
MTHFD1-210ENST00000555252 LTA4HP09960 611 aaKnown RBP10.64□□□□□ -0.71
MTHFD1-210ENST00000555252 HNRNPLP14866 589 aaKnown RBP eCLIP10.64□□□□□ -0.71
MTHFD1-210ENST00000555252 IMPDH1P20839 514 aa10.64□□□□□ -0.71
MTHFD1-210ENST00000555252 SLC6A2P23975 617 aa10.64□□□□□ -0.71
MTHFD1-210ENST00000555252 ADRA1AP35348 466 aa10.64□□□□□ -0.71
MTHFD1-210ENST00000555252 AVPR1AP37288 418 aa10.64□□□□□ -0.71
MTHFD1-210ENST00000555252 AFF1P51825 1210 aaKnown RBP10.64□□□□□ -0.71
MTHFD1-210ENST00000555252 NKX3-2P78367 333 aa10.64□□□□□ -0.71
MTHFD1-210ENST00000555252 SMAD1Q15797 465 aaKnown RBP10.64□□□□□ -0.71
MTHFD1-210ENST00000555252 TTC23Q5W5X9 447 aa10.64□□□□□ -0.71
MTHFD1-210ENST00000555252 AFMIDQ63HM1 303 aa10.64□□□□□ -0.71
MTHFD1-210ENST00000555252 OVOS1Q6IE37 1185 aa10.64□□□□□ -0.71
MTHFD1-210ENST00000555252 GDF6Q6KF10 455 aaPredicted RBP10.64□□□□□ -0.71
MTHFD1-210ENST00000555252 PRR23BQ6ZRT6 265 aa10.64□□□□□ -0.71
MTHFD1-210ENST00000555252 RETREG3Q86VR2 466 aa10.64□□□□□ -0.71
MTHFD1-210ENST00000555252 ANKRD13BQ86YJ7 626 aa10.64□□□□□ -0.71
MTHFD1-210ENST00000555252 CEP97Q8IW35 865 aa10.64□□□□□ -0.71
MTHFD1-210ENST00000555252 USP33Q8TEY7 942 aa10.64□□□□□ -0.71
MTHFD1-210ENST00000555252 LRRC58Q96CX6 371 aa10.64□□□□□ -0.71
MTHFD1-210ENST00000555252 C19orf60Q96EN9 201 aa10.64□□□□□ -0.71
MTHFD1-210ENST00000555252 AURKBQ96GD4 344 aaPredicted RBP10.64□□□□□ -0.71
MTHFD1-210ENST00000555252 FBXO8Q9NRD0 319 aa10.64□□□□□ -0.71
MTHFD1-210ENST00000555252 IGSF5Q9NSI5 407 aa10.64□□□□□ -0.71
MTHFD1-210ENST00000555252 UBP1Q9NZI7 540 aa10.64□□□□□ -0.71
MTHFD1-210ENST00000555252 ENPP5Q9UJA9 477 aa10.64□□□□□ -0.71
MTHFD1-210ENST00000555252 ERVK-11Q9UQG0 969 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms