RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 IL10RBQ08334 325 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 RARS2Q5T160 578 aaKnown RBP12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 RAET1GQ6H3X3 334 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 MSANTD2Q6P1R3 559 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 FKBP9P1Q75LS8 142 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 MRPL10Q7Z7H8 261 aaKnown RBP12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 ZBTB46Q86UZ6 589 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 SERPINA9Q86WD7 417 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 C8orf48Q96LL4 319 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 CASD1Q96PB1 797 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 MRPL57Q9BQC6 102 aaKnown RBP12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 CDH19Q9H159 772 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 WDR41Q9HAD4 459 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 VPS45Q9NRW7 570 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 SH3BP4Q9P0V3 963 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 H3BMM5 538 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 M0QZQ0 153 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 CLASP2O75122 1294 aaKnown RBP12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 IPO13O94829 963 aaKnown RBP12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 OAZ2O95190 189 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 CLCN5P51795 746 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 PPP1R8Q12972 351 aaKnown RBP12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 GTF2H3Q13889 308 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 MAP7Q14244 749 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 PCLAFQ15004 111 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 CNPY1Q3B7I2 92 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 SETMARQ53H47 684 aaPredicted RBP12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 PAOXQ6QHF9 649 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 CCDC149Q6ZUS6 474 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 CHST9Q7L1S5 443 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 ULK2Q8IYT8 1036 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 BEND7Q8N7W2 519 aaPredicted RBP12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 BCL7CQ8WUZ0 217 aaPredicted RBP12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 WDR60Q8WVS4 1066 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 WBP2Q969T9 261 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 VPS33AQ96AX1 596 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 VPS50Q96JG6 964 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 TSSK3Q96PN8 268 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 CDK5RAP1Q96SZ6 601 aaKnown RBP12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 CLSTN3Q9BQT9 956 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 MAGEA13PA6NCF6 341 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 KRT87PA6NCN2 255 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 E7ESA3 106 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 XYLBO75191 536 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 EPB42P16452 691 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 FUT4P22083 530 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 PIK3R1P27986 724 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 RPL38P63173 70 aaKnown RBP12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 KLF10Q13118 480 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 ZNF534Q76KX8 674 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 ARHGAP12Q8IWW6 846 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 LMNTD1Q8N9Z9 388 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 BHLHE22Q8NFJ8 381 aaPredicted RBP12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 TMEM174Q8WUU8 243 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 TMEM159Q96B96 161 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 DCLRE1BQ9H816 532 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 SLC28A3Q9HAS3 691 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 CDH22Q9UJ99 828 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 PCDHGA4Q9Y5G9 962 aa12.17□□□□□ -0.46
ARHGEF40-206ENST00000555232 OR4F21O95013 312 aa12.16□□□□□ -0.46
ARHGEF40-206ENST00000555232 ALDH9A1P49189 494 aa12.16□□□□□ -0.46
ARHGEF40-206ENST00000555232 SERINC3Q13530 473 aa12.16□□□□□ -0.46
ARHGEF40-206ENST00000555232 TTLL9Q3SXZ7 439 aa12.16□□□□□ -0.46
ARHGEF40-206ENST00000555232 ATP6AP1LQ52LC2 224 aa12.16□□□□□ -0.46
ARHGEF40-206ENST00000555232 OTUD1Q5VV17 481 aaPredicted RBP12.16□□□□□ -0.46
ARHGEF40-206ENST00000555232 ASRGL1Q7L266 308 aa12.16□□□□□ -0.46
ARHGEF40-206ENST00000555232 RALGPS2Q86X27 583 aaPredicted RBP12.16□□□□□ -0.46
ARHGEF40-206ENST00000555232 TMEM25Q86YD3 366 aa12.16□□□□□ -0.46
ARHGEF40-206ENST00000555232 FAM126BQ8IXS8 530 aa12.16□□□□□ -0.46
ARHGEF40-206ENST00000555232 PNPT1Q8TCS8 783 aaKnown RBP12.16□□□□□ -0.46
ARHGEF40-206ENST00000555232 SDCCAG3Q96C92 435 aa12.16□□□□□ -0.46
ARHGEF40-206ENST00000555232 OLFM1Q99784 485 aa12.16□□□□□ -0.46
ARHGEF40-206ENST00000555232 RUBCNLQ9H714 662 aa12.16□□□□□ -0.46
ARHGEF40-206ENST00000555232 DDX18Q9NVP1 670 aaKnown RBP12.16□□□□□ -0.46
ARHGEF40-206ENST00000555232 RAP2CQ9Y3L5 183 aa12.16□□□□□ -0.46
ARHGEF40-206ENST00000555232 MUSKO15146 869 aa12.16□□□□□ -0.46
ARHGEF40-206ENST00000555232 TGM5O43548 720 aa12.16□□□□□ -0.46
ARHGEF40-206ENST00000555232 KLKB1P03952 638 aa12.16□□□□□ -0.46
ARHGEF40-206ENST00000555232 EPHX1P07099 455 aa12.16□□□□□ -0.46
ARHGEF40-206ENST00000555232 SOAT1P35610 550 aa12.16□□□□□ -0.46
ARHGEF40-206ENST00000555232 AARS2Q5JTZ9 985 aaKnown RBP12.16□□□□□ -0.46
ARHGEF40-206ENST00000555232 CGB2Q6NT52 195 aa12.16□□□□□ -0.46
ARHGEF40-206ENST00000555232 ANKRD46Q86W74 232 aa12.16□□□□□ -0.46
ARHGEF40-206ENST00000555232 TRIML2Q8N7C3 387 aa12.16□□□□□ -0.46
ARHGEF40-206ENST00000555232 EEF1AKMT1Q8WVE0 214 aa12.16□□□□□ -0.46
ARHGEF40-206ENST00000555232 PPM1MQ96MI6 270 aa12.16□□□□□ -0.46
ARHGEF40-206ENST00000555232 FOPNLQ96NB1 174 aa12.16□□□□□ -0.46
ARHGEF40-206ENST00000555232 OLFM3Q96PB7 478 aa12.16□□□□□ -0.46
ARHGEF40-206ENST00000555232 PCDHAC1Q9H158 963 aa12.16□□□□□ -0.46
ARHGEF40-206ENST00000555232 MAGEH1Q9H213 219 aa12.16□□□□□ -0.46
ARHGEF40-206ENST00000555232 NOL11Q9H8H0 719 aaKnown RBP12.16□□□□□ -0.46
ARHGEF40-206ENST00000555232 CLIC5Q9NZA1 410 aa12.16□□□□□ -0.46
ARHGEF40-206ENST00000555232 COQ6Q9Y2Z9 468 aa12.16□□□□□ -0.46
ARHGEF40-206ENST00000555232 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.16□□□□□ -0.46
ARHGEF40-206ENST00000555232 FAM149AA5PLN7 773 aa12.16□□□□□ -0.46
ARHGEF40-206ENST00000555232 ZNF839A8K0R7 811 aa12.16□□□□□ -0.46
ARHGEF40-206ENST00000555232 ANKRD66B4E2M5 251 aa12.16□□□□□ -0.46
ARHGEF40-206ENST00000555232 PRMT5O14744 637 aaPredicted RBP12.16□□□□□ -0.46
ARHGEF40-206ENST00000555232 CDK7P50613 346 aa12.16□□□□□ -0.46
ARHGEF40-206ENST00000555232 NDST2P52849 883 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms