RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 INAVAQ3KP66 663 aa12.26□□□□□ -0.45
SYNE2-214ENST00000554928 ATP13A5Q4VNC0 1218 aa12.26□□□□□ -0.45
SYNE2-214ENST00000554928 FAM151BQ6UXP7 276 aa12.26□□□□□ -0.45
SYNE2-214ENST00000554928 SLC35F3Q8IY50 421 aa12.26□□□□□ -0.45
SYNE2-214ENST00000554928 CHCHD4Q8N4Q1 142 aa12.26□□□□□ -0.45
SYNE2-214ENST00000554928 OR52K1Q8NGK4 314 aa12.26□□□□□ -0.45
SYNE2-214ENST00000554928 NAT14Q8WUY8 206 aa12.26□□□□□ -0.45
SYNE2-214ENST00000554928 BTN2A2Q8WVV5 523 aa12.26□□□□□ -0.45
SYNE2-214ENST00000554928 CDC6Q99741 560 aa12.26□□□□□ -0.45
SYNE2-214ENST00000554928 TRABDQ9H4I3 376 aa12.26□□□□□ -0.45
SYNE2-214ENST00000554928 UGT1A7Q9HAW7 530 aa12.26□□□□□ -0.45
SYNE2-214ENST00000554928 UGT1A10Q9HAW8 530 aa12.26□□□□□ -0.45
SYNE2-214ENST00000554928 UGT1A8Q9HAW9 530 aa12.26□□□□□ -0.45
SYNE2-214ENST00000554928 ARNT2Q9HBZ2 717 aa12.26□□□□□ -0.45
SYNE2-214ENST00000554928 KCTD5Q9NXV2 234 aa12.26□□□□□ -0.45
SYNE2-214ENST00000554928 NLGN3Q9NZ94 848 aa12.26□□□□□ -0.45
SYNE2-214ENST00000554928 SIRPGQ9P1W8 387 aa12.26□□□□□ -0.45
SYNE2-214ENST00000554928 NFKBIL1Q9UBC1 381 aaPredicted RBP12.26□□□□□ -0.45
SYNE2-214ENST00000554928 FKBPLQ9UIM3 349 aa12.26□□□□□ -0.45
SYNE2-214ENST00000554928 CSNK1G3Q9Y6M4 447 aa12.26□□□□□ -0.45
SYNE2-214ENST00000554928 SCN8AQ9UQD0 1980 aa12.26□□□□□ -0.45
SYNE2-214ENST00000554928 LMO7DNF2Z398 122 aa12.25□□□□□ -0.45
SYNE2-214ENST00000554928 PGRMC1O00264 195 aaKnown RBP12.25□□□□□ -0.45
SYNE2-214ENST00000554928 PDE2AO00408 941 aaPredicted RBP12.25□□□□□ -0.45
SYNE2-214ENST00000554928 LDB2O43679 373 aa12.25□□□□□ -0.45
SYNE2-214ENST00000554928 DNAJC6O75061 913 aa12.25□□□□□ -0.45
SYNE2-214ENST00000554928 ASMTLO95671 621 aa12.25□□□□□ -0.45
SYNE2-214ENST00000554928 IVLP07476 585 aa12.25□□□□□ -0.45
SYNE2-214ENST00000554928 PRSS56P0CW18 603 aa12.25□□□□□ -0.45
SYNE2-214ENST00000554928 CTSEP14091 401 aa12.25□□□□□ -0.45
SYNE2-214ENST00000554928 KELP23276 732 aa12.25□□□□□ -0.45
SYNE2-214ENST00000554928 COILP38432 576 aaPredicted RBP12.25□□□□□ -0.45
SYNE2-214ENST00000554928 ADCY8P40145 1251 aa12.25□□□□□ -0.45
SYNE2-214ENST00000554928 TNNT3P45378 269 aaPredicted RBP12.25□□□□□ -0.45
SYNE2-214ENST00000554928 VPS41P49754 854 aa12.25□□□□□ -0.45
SYNE2-214ENST00000554928 ZNF140P52738 457 aaPredicted RBP12.25□□□□□ -0.45
SYNE2-214ENST00000554928 POU6F1Q14863 301 aa12.25□□□□□ -0.45
SYNE2-214ENST00000554928 CYP1B1Q16678 543 aa12.25□□□□□ -0.45
SYNE2-214ENST00000554928 CCDC38Q502W7 563 aa12.25□□□□□ -0.45
SYNE2-214ENST00000554928 CERCAMQ5T4B2 595 aa12.25□□□□□ -0.45
SYNE2-214ENST00000554928 PAPD7Q5XG87 772 aaKnown RBP12.25□□□□□ -0.45
SYNE2-214ENST00000554928 DHRS13Q6UX07 377 aa12.25□□□□□ -0.45
SYNE2-214ENST00000554928 RAVER1Q8IY67 606 aaKnown RBP12.25□□□□□ -0.45
SYNE2-214ENST00000554928 TRAM1L1Q8N609 369 aa12.25□□□□□ -0.45
SYNE2-214ENST00000554928 CCDC89Q8N998 374 aa12.25□□□□□ -0.45
SYNE2-214ENST00000554928 KYQ8NBH2 561 aa12.25□□□□□ -0.45
SYNE2-214ENST00000554928 OR4K2Q8NGD2 314 aa12.25□□□□□ -0.45
SYNE2-214ENST00000554928 ACTRT1Q8TDG2 376 aa12.25□□□□□ -0.45
SYNE2-214ENST00000554928 MAIP1Q8WWC4 291 aa12.25□□□□□ -0.45
SYNE2-214ENST00000554928 MAGOHBQ96A72 148 aaKnown RBP12.25□□□□□ -0.45
SYNE2-214ENST00000554928 SCARF2Q96GP6 870 aaPredicted RBP12.25□□□□□ -0.45
SYNE2-214ENST00000554928 DNAJC1Q96KC8 554 aaKnown RBP12.25□□□□□ -0.45
SYNE2-214ENST00000554928 CAPZA3Q96KX2 299 aa12.25□□□□□ -0.45
SYNE2-214ENST00000554928 TBATAQ96M53 351 aa12.25□□□□□ -0.45
SYNE2-214ENST00000554928 OR2AG1Q9H205 316 aa12.25□□□□□ -0.45
SYNE2-214ENST00000554928 LRRC40Q9H9A6 602 aa12.25□□□□□ -0.45
SYNE2-214ENST00000554928 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.25□□□□□ -0.45
SYNE2-214ENST00000554928 HACD3Q9P035 362 aa12.25□□□□□ -0.45
SYNE2-214ENST00000554928 PAK5Q9P286 719 aa12.25□□□□□ -0.45
SYNE2-214ENST00000554928 ATXN10Q9UBB4 475 aa12.25□□□□□ -0.45
SYNE2-214ENST00000554928 ZKSCAN5Q9Y2L8 839 aa12.25□□□□□ -0.45
SYNE2-214ENST00000554928 COL5A1P20908 1838 aaPredicted RBP12.25□□□□□ -0.45
SYNE2-214ENST00000554928 STX7O15400 261 aaKnown RBP12.24□□□□□ -0.45
SYNE2-214ENST00000554928 ZNF189O75820 626 aaPredicted RBP12.24□□□□□ -0.45
SYNE2-214ENST00000554928 SUN1O94901 812 aa12.24□□□□□ -0.45
SYNE2-214ENST00000554928 ANXA6P08133 673 aa12.24□□□□□ -0.45
SYNE2-214ENST00000554928 ZNF8P17098 575 aaPredicted RBP12.24□□□□□ -0.45
SYNE2-214ENST00000554928 CKMT2P17540 419 aa12.24□□□□□ -0.45
SYNE2-214ENST00000554928 FDFT1P37268 417 aa12.24□□□□□ -0.45
SYNE2-214ENST00000554928 SPAM1P38567 509 aa12.24□□□□□ -0.45
SYNE2-214ENST00000554928 BLKP51451 505 aa12.24□□□□□ -0.45
SYNE2-214ENST00000554928 XIAPP98170 497 aa12.24□□□□□ -0.45
SYNE2-214ENST00000554928 CTBSQ01459 385 aa12.24□□□□□ -0.45
SYNE2-214ENST00000554928 PEX6Q13608 980 aa12.24□□□□□ -0.45
SYNE2-214ENST00000554928 TAF1AQ15573 450 aaPredicted RBP12.24□□□□□ -0.45
SYNE2-214ENST00000554928 MYLKQ15746 1914 aa12.24□□□□□ -0.45
SYNE2-214ENST00000554928 PYCR3Q53H96 274 aa12.24□□□□□ -0.45
SYNE2-214ENST00000554928 C6orf132Q5T0Z8 1188 aa12.24□□□□□ -0.45
SYNE2-214ENST00000554928 ANKRD22Q5VYY1 191 aa12.24□□□□□ -0.45
SYNE2-214ENST00000554928 GUSBP11Q6P575 273 aa12.24□□□□□ -0.45
SYNE2-214ENST00000554928 GSTA5Q7RTV2 222 aa12.24□□□□□ -0.45
SYNE2-214ENST00000554928 RAB44Q7Z6P3 723 aaPredicted RBP12.24□□□□□ -0.45
SYNE2-214ENST00000554928 TAF8Q7Z7C8 310 aa12.24□□□□□ -0.45
SYNE2-214ENST00000554928 ADGRG6Q86SQ4 1221 aa12.24□□□□□ -0.45
SYNE2-214ENST00000554928 CREG2Q8IUH2 290 aa12.24□□□□□ -0.45
SYNE2-214ENST00000554928 FSTL5Q8N475 847 aaPredicted RBP12.24□□□□□ -0.45
SYNE2-214ENST00000554928 FAM181AQ8N9Y4 354 aa12.24□□□□□ -0.45
SYNE2-214ENST00000554928 ATL2Q8NHH9 583 aa12.24□□□□□ -0.45
SYNE2-214ENST00000554928 BRSK1Q8TDC3 778 aa12.24□□□□□ -0.45
SYNE2-214ENST00000554928 GLYATL1Q969I3 302 aa12.24□□□□□ -0.45
SYNE2-214ENST00000554928 PLEKHG4BQ96PX9 1271 aa12.24□□□□□ -0.45
SYNE2-214ENST00000554928 NAPGQ99747 312 aaPredicted RBP12.24□□□□□ -0.45
SYNE2-214ENST00000554928 BOCQ9BWV1 1114 aa12.24□□□□□ -0.45
SYNE2-214ENST00000554928 FAM96AQ9H5X1 160 aa12.24□□□□□ -0.45
SYNE2-214ENST00000554928 SPATS2LQ9NUQ6 558 aaKnown RBP12.24□□□□□ -0.45
SYNE2-214ENST00000554928 KLK13Q9UKR3 277 aa12.24□□□□□ -0.45
SYNE2-214ENST00000554928 NEU2Q9Y3R4 380 aa12.24□□□□□ -0.45
SYNE2-214ENST00000554928 GPSM3Q9Y4H4 160 aa12.24□□□□□ -0.45
SYNE2-214ENST00000554928 GLYATL1P3A0A0U1RQE8 302 aa12.23□□□□□ -0.45
SYNE2-214ENST00000554928 NEMP2A6NFY4 417 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms