RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 PLAURQ03405 335 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 CLINT1Q14677 625 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 ADGRF2Q8IZF7 708 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 RIOK2Q9BVS4 552 aaKnown RBP3.29□□□□□ -1.88
SYNE2-212ENST00000554584 ZYG11BQ9C0D3 744 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 STK39Q9UEW8 545 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 ING4Q9UNL4 249 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 H7C4K7 107 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 KLHL2O95198 593 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 AOC1P19801 751 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 CHRNB3Q05901 458 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 UGCGQ16739 394 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 IL27RAQ6UWB1 636 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 EEF1AKMT1Q8WVE0 214 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 PTERQ96BW5 349 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 REPS1Q96D71 796 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 RNF26Q9BY78 433 aaPredicted RBP3.29□□□□□ -1.88
SYNE2-212ENST00000554584 PLEKHA1Q9HB21 404 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 GLOD4Q9HC38 313 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 TBC1D22BQ9NU19 505 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 AGPAT5Q9NUQ2 364 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 NWD2Q9ULI1 1742 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 CIB4A0PJX0 185 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 NXPH3O95157 252 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 POU2F1P14859 743 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 ZNF844Q08AG5 666 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 UBAP2Q5T6F2 1119 aaKnown RBP3.29□□□□□ -1.88
SYNE2-212ENST00000554584 LAS2Q8IYD9 372 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 MRIQ9BWK5 157 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 TAF1DQ9H5J8 278 aaPredicted RBP3.29□□□□□ -1.88
SYNE2-212ENST00000554584 CLUHO75153 1309 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 AOX1Q06278 1338 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 H3BM21 787 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 SLC37A4O43826 429 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 CCNYL3P0C7X3 344 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 PKMP14618 531 aaKnown RBP3.29□□□□□ -1.88
SYNE2-212ENST00000554584 KIAA0319LQ8IZA0 1049 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 DEFB106AQ8N104 65 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 APBA2Q99767 749 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 C2orf40Q9H1Z8 148 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 LY9Q9HBG7 655 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 AP4S1Q9Y587 144 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 KIAA1210Q9ULL0 1709 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 A8MV72 311 aaPredicted RBP3.29□□□□□ -1.88
SYNE2-212ENST00000554584 CLDN4O14493 209 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 EIF3HO15372 352 aaKnown RBP eCLIP3.29□□□□□ -1.883e-6■■■■□ 24.3
SYNE2-212ENST00000554584 HSPA12AO43301 675 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 AK4P27144 223 aaPredicted RBP3.29□□□□□ -1.88
SYNE2-212ENST00000554584 OLIG2Q13516 323 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 KPNB1Q14974 876 aaKnown RBP3.29□□□□□ -1.88
SYNE2-212ENST00000554584 IQCCQ4KMZ1 466 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 C3orf62Q6ZUJ4 267 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 PIAS4Q8N2W9 510 aaPredicted RBP3.29□□□□□ -1.88
SYNE2-212ENST00000554584 OR10T2Q8NGX3 314 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 IL31RAQ8NI17 732 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 REEP2Q9BRK0 252 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 TRMT61BQ9BVS5 477 aaKnown RBP3.29□□□□□ -1.88
SYNE2-212ENST00000554584 NDST4Q9H3R1 872 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 TNCP24821 2201 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 ARHGAP31Q2M1Z3 1444 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 PTPRJQ12913 1337 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 MUSKO15146 869 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 B4GAT1O43505 415 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 ASGR2P07307 311 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 S100A3P33764 101 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 RGS1Q08116 209 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 DHX34Q14147 1143 aaKnown RBP3.29□□□□□ -1.88
SYNE2-212ENST00000554584 NDUFA5Q16718 116 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 METTL16Q86W50 562 aaKnown RBP3.29□□□□□ -1.88
SYNE2-212ENST00000554584 ARL14EPQ8N8R7 260 aaPredicted RBP3.29□□□□□ -1.88
SYNE2-212ENST00000554584 TRIM9Q9C026 710 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 CCDC134Q9H6E4 229 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 DCLRE1BQ9H816 532 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 RALGAPA1Q6GYQ0 2036 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 M0R036 132 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 AHCYL1O43865 530 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 SEC24CP53992 1094 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 SMAD3P84022 425 aaKnown RBP3.29□□□□□ -1.88
SYNE2-212ENST00000554584 TBCELQ5QJ74 424 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 PRICKLE2Q7Z3G6 844 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 TCAIMQ8N3R3 496 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 CASTOR1Q8WTX7 329 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 S100ZQ8WXG8 99 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 OSBPL5Q9H0X9 879 aaPredicted RBP3.29□□□□□ -1.88
SYNE2-212ENST00000554584 WNT8AQ9H1J5 351 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 ASAH2Q9NR71 780 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 DDX18Q9NVP1 670 aaKnown RBP3.29□□□□□ -1.88
SYNE2-212ENST00000554584 RRN3Q9NYV6 651 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 KLHL42Q9P2K6 505 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 VPS9D1Q9Y2B5 631 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 MAP4K5Q9Y4K4 846 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 SLC26A4O43511 780 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 UGT2B4P06133 528 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 CHRNGP07510 517 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 GTF2A2P52657 109 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 PUM1Q14671 1186 aaKnown RBP eCLIP3.29□□□□□ -1.88
SYNE2-212ENST00000554584 Q4G0T1 1027 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 ANKRD13AQ8IZ07 590 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 FBXO22Q8NEZ5 403 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 ENGASEQ8NFI3 743 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms