RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 ZBED6P86452 979 aa5□□□□□ -1.61
SCFD1-211ENST00000554437 PDE1BQ01064 536 aa5□□□□□ -1.61
SCFD1-211ENST00000554437 PRKG2Q13237 762 aa5□□□□□ -1.61
SCFD1-211ENST00000554437 ADIPOQQ15848 244 aa5□□□□□ -1.61
SCFD1-211ENST00000554437 ZSCAN23Q3MJ62 389 aa5□□□□□ -1.61
SCFD1-211ENST00000554437 DCST1Q5T197 706 aa5□□□□□ -1.61
SCFD1-211ENST00000554437 GPATCH4Q5T3I0 446 aaKnown RBP5□□□□□ -1.61
SCFD1-211ENST00000554437 FRG2Q64ET8 278 aa5□□□□□ -1.61
SCFD1-211ENST00000554437 KLHL35Q6PF15 583 aa5□□□□□ -1.61
SCFD1-211ENST00000554437 UNQ6126/PRO20091Q6UXV3 157 aa5□□□□□ -1.61
SCFD1-211ENST00000554437 GLDNQ6ZMI3 551 aaPredicted RBP5□□□□□ -1.61
SCFD1-211ENST00000554437 C4orf50Q6ZRC1 276 aa5□□□□□ -1.61
SCFD1-211ENST00000554437 SEPT14Q6ZU15 432 aa5□□□□□ -1.61
SCFD1-211ENST00000554437 SFR1Q86XK3 245 aa5□□□□□ -1.61
SCFD1-211ENST00000554437 ZNF34Q8IZ26 560 aa5□□□□□ -1.61
SCFD1-211ENST00000554437 DCP1BQ8IZD4 617 aaKnown RBP5□□□□□ -1.61
SCFD1-211ENST00000554437 SPATA22Q8NHS9 363 aa5□□□□□ -1.61
SCFD1-211ENST00000554437 HMGCLL1Q8TB92 370 aa5□□□□□ -1.61
SCFD1-211ENST00000554437 FIG4Q92562 907 aa5□□□□□ -1.61
SCFD1-211ENST00000554437 APBB2Q92870 758 aa5□□□□□ -1.61
SCFD1-211ENST00000554437 CMTM3Q96MX0 182 aa5□□□□□ -1.61
SCFD1-211ENST00000554437 NCAPGQ9BPX3 1015 aa5□□□□□ -1.61
SCFD1-211ENST00000554437 FTOQ9C0B1 505 aaKnown RBP eCLIP5□□□□□ -1.61
SCFD1-211ENST00000554437 ALDH8A1Q9H2A2 487 aaPredicted RBP5□□□□□ -1.61
SCFD1-211ENST00000554437 RETREG1Q9H6L5 497 aa5□□□□□ -1.61
SCFD1-211ENST00000554437 SH2D4AQ9H788 454 aa5□□□□□ -1.61
SCFD1-211ENST00000554437 KAT14Q9H8E8 782 aa5□□□□□ -1.61
SCFD1-211ENST00000554437 LTB4R2Q9NPC1 389 aa5□□□□□ -1.61
SCFD1-211ENST00000554437 BLOC1S4Q9NUP1 217 aa5□□□□□ -1.61
SCFD1-211ENST00000554437 LRP12Q9Y561 859 aa5□□□□□ -1.61
SCFD1-211ENST00000554437 PDS5AQ29RF7 1337 aaKnown RBP4.99□□□□□ -1.61
SCFD1-211ENST00000554437 BICDL2A1A5D9 508 aa4.99□□□□□ -1.61
SCFD1-211ENST00000554437 MYO1GB0I1T2 1018 aa4.99□□□□□ -1.61
SCFD1-211ENST00000554437 H3BQ06 376 aaPredicted RBP4.99□□□□□ -1.61
SCFD1-211ENST00000554437 M0QZ24 198 aa4.99□□□□□ -1.61
SCFD1-211ENST00000554437 SNRNP70P08621 437 aaKnown RBP4.99□□□□□ -1.61
SCFD1-211ENST00000554437 PRAMEP78395 509 aa4.99□□□□□ -1.61
SCFD1-211ENST00000554437 SLC20A2Q08357 652 aa4.99□□□□□ -1.61
SCFD1-211ENST00000554437 MAD2L1Q13257 205 aaPredicted RBP4.99□□□□□ -1.61
SCFD1-211ENST00000554437 PNLIPRP3Q17RR3 467 aa4.99□□□□□ -1.61
SCFD1-211ENST00000554437 GKAP1Q5VSY0 366 aaPredicted RBP4.99□□□□□ -1.61
SCFD1-211ENST00000554437 SARM1Q6SZW1 724 aa4.99□□□□□ -1.61
SCFD1-211ENST00000554437 GET4Q7L5D6 327 aaPredicted RBP4.99□□□□□ -1.61
SCFD1-211ENST00000554437 BHLHA9Q7RTU4 235 aa4.99□□□□□ -1.61
SCFD1-211ENST00000554437 SATL1Q86VE3 508 aa4.99□□□□□ -1.61
SCFD1-211ENST00000554437 ODF3L1Q8IXM7 274 aa4.99□□□□□ -1.61
SCFD1-211ENST00000554437 SRBD1Q8N5C6 995 aaKnown RBP4.99□□□□□ -1.61
SCFD1-211ENST00000554437 ZNF441Q8N8Z8 693 aa4.99□□□□□ -1.61
SCFD1-211ENST00000554437 KCNH5Q8NCM2 988 aa4.99□□□□□ -1.61
SCFD1-211ENST00000554437 DUSP19Q8WTR2 217 aa4.99□□□□□ -1.61
SCFD1-211ENST00000554437 RHBDF1Q96CC6 855 aa4.99□□□□□ -1.61
SCFD1-211ENST00000554437 IL17FQ96PD4 163 aa4.99□□□□□ -1.61
SCFD1-211ENST00000554437 CHCHD6Q9BRQ6 235 aa4.99□□□□□ -1.61
SCFD1-211ENST00000554437 TBC1D22BQ9NU19 505 aa4.99□□□□□ -1.61
SCFD1-211ENST00000554437 SEPT11Q9NVA2 429 aaKnown RBP4.99□□□□□ -1.61
SCFD1-211ENST00000554437 CWC15Q9P013 229 aaKnown RBP4.99□□□□□ -1.61
SCFD1-211ENST00000554437 OR14J1Q9UGF5 321 aa4.99□□□□□ -1.61
SCFD1-211ENST00000554437 ACSL5Q9ULC5 683 aa4.99□□□□□ -1.61
SCFD1-211ENST00000554437 AMDHD2Q9Y303 409 aa4.99□□□□□ -1.61
SCFD1-211ENST00000554437 TTLL3Q9Y4R7 772 aa4.99□□□□□ -1.61
SCFD1-211ENST00000554437 CLIC4Q9Y696 253 aa4.99□□□□□ -1.61
SCFD1-211ENST00000554437 IGHV4OR15-8A0A075B7B6 117 aa4.98□□□□□ -1.61
SCFD1-211ENST00000554437 ZNF587BE7ETH6 402 aa4.98□□□□□ -1.61
SCFD1-211ENST00000554437 HS3ST1O14792 307 aa4.98□□□□□ -1.61
SCFD1-211ENST00000554437 ATP2A1O14983 1001 aa4.98□□□□□ -1.61
SCFD1-211ENST00000554437 SCAMP1O15126 338 aa4.98□□□□□ -1.61
SCFD1-211ENST00000554437 ZBED4O75132 1171 aa4.98□□□□□ -1.61
SCFD1-211ENST00000554437 TMEM11P17152 192 aa4.98□□□□□ -1.61
SCFD1-211ENST00000554437 S1PR1P21453 382 aa4.98□□□□□ -1.61
SCFD1-211ENST00000554437 GNL1P36915 607 aaPredicted RBP4.98□□□□□ -1.61
SCFD1-211ENST00000554437 GAS1P54826 345 aa4.98□□□□□ -1.61
SCFD1-211ENST00000554437 TAS2R38P59533 333 aa4.98□□□□□ -1.61
SCFD1-211ENST00000554437 TFAP4Q01664 338 aa4.98□□□□□ -1.61
SCFD1-211ENST00000554437 CDC16Q13042 620 aa4.98□□□□□ -1.61
SCFD1-211ENST00000554437 ZBTB17Q13105 803 aa4.98□□□□□ -1.61
SCFD1-211ENST00000554437 CRYMQ14894 314 aa4.98□□□□□ -1.61
SCFD1-211ENST00000554437 KLHL22Q53GT1 634 aa4.98□□□□□ -1.61
SCFD1-211ENST00000554437 SPECC1Q5M775 1068 aa4.98□□□□□ -1.61
SCFD1-211ENST00000554437 LRIF1Q5T3J3 769 aa4.98□□□□□ -1.61
SCFD1-211ENST00000554437 ARMC3Q5W041 872 aa4.98□□□□□ -1.61
SCFD1-211ENST00000554437 TMEM154Q6P9G4 183 aa4.98□□□□□ -1.61
SCFD1-211ENST00000554437 RNF168Q8IYW5 571 aaPredicted RBP4.98□□□□□ -1.61
SCFD1-211ENST00000554437 RNF113BQ8IZP6 322 aaKnown RBP4.98□□□□□ -1.61
SCFD1-211ENST00000554437 WDTC1Q8N5D0 677 aa4.98□□□□□ -1.61
SCFD1-211ENST00000554437 SCFD2Q8WU76 684 aa4.98□□□□□ -1.61
SCFD1-211ENST00000554437 SLC20A1Q8WUM9 679 aa4.98□□□□□ -1.61
SCFD1-211ENST00000554437 LMLNQ96KR4 655 aa4.98□□□□□ -1.61
SCFD1-211ENST00000554437 SEPT5Q99719 369 aaPredicted RBP4.98□□□□□ -1.61
SCFD1-211ENST00000554437 UBTD1Q9HAC8 227 aa4.98□□□□□ -1.61
SCFD1-211ENST00000554437 COPG2Q9UBF2 871 aa4.98□□□□□ -1.61
SCFD1-211ENST00000554437 PADI1Q9ULC6 663 aa4.98□□□□□ -1.61
SCFD1-211ENST00000554437 A0A1B0GUV1 79 aa4.97□□□□□ -1.61
SCFD1-211ENST00000554437 EME2A4GXA9 379 aaPredicted RBP4.97□□□□□ -1.61
SCFD1-211ENST00000554437 PRSS44E7EML9 344 aa4.97□□□□□ -1.61
SCFD1-211ENST00000554437 AP3D1O14617 1153 aa4.97□□□□□ -1.61
SCFD1-211ENST00000554437 TMCC2O75069 709 aa4.97□□□□□ -1.61
SCFD1-211ENST00000554437 PTP4A3O75365 173 aa4.97□□□□□ -1.61
SCFD1-211ENST00000554437 DDNO94850 711 aaPredicted RBP4.97□□□□□ -1.61
SCFD1-211ENST00000554437 CORO1AP31146 461 aaKnown RBP4.97□□□□□ -1.61
SCFD1-211ENST00000554437 FASLGP48023 281 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms