RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 RETREG3Q86VR2 466 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 ZNF444Q8N0Y2 327 aaPredicted RBP9.51□□□□□ -0.89
SIX4-202ENST00000554079 NIPA2Q8N8Q9 360 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 RAET1EQ8TD07 263 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 ISL2Q96A47 359 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 CIDECQ96AQ7 238 aaPredicted RBP9.51□□□□□ -0.89
SIX4-202ENST00000554079 LENG9Q96B70 501 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 MFSD3Q96ES6 412 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 SLC30A3Q99726 388 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 EIF2AK1Q9BQI3 630 aaKnown RBP9.51□□□□□ -0.89
SIX4-202ENST00000554079 BEX2Q9BXY8 128 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 IL22Q9GZX6 179 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 NUAK2Q9H093 628 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 DCSTAMPQ9H295 470 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 SLC35C2Q9NQQ7 365 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 RAB6BQ9NRW1 208 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 HSPBP1Q9NZL4 362 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 GTF2IRD1Q9UHL9 959 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 PNMA8BQ9ULN7 279 aaPredicted RBP9.51□□□□□ -0.89
SIX4-202ENST00000554079 MAGED2Q9UNF1 606 aaPredicted RBP9.51□□□□□ -0.89
SIX4-202ENST00000554079 HSPE1-MOB4S4R3N1 261 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 CIB4A0PJX0 185 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 OR6C70A6NIJ9 312 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 SLCO1B7G3V0H7 640 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 EEF2KO00418 725 aaKnown RBP9.51□□□□□ -0.89
SIX4-202ENST00000554079 TBX3O15119 743 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 ARPC2O15144 300 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 PLA2G6O60733 806 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 KRT7P08729 469 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 HSD17B1P14061 328 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 KELP23276 732 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 FSHRP23945 695 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 MASP1P48740 699 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 RGS7P49802 495 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 ALDH3A2P51648 485 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 BLVRAP53004 296 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 ARSFP54793 590 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 GCNT1Q02742 428 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 TRAF3Q13114 568 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 PRKAA1Q13131 559 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 IRF3Q14653 427 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 PYCR3Q53H96 274 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 ODR4Q5SWX8 454 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 PPP1R26Q5T8A7 1209 aaPredicted RBP9.51□□□□□ -0.89
SIX4-202ENST00000554079 CACHD1Q5VU97 1274 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 LAYNQ6UX15 382 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 EFL1Q7Z2Z2 1120 aaKnown RBP9.51□□□□□ -0.89
SIX4-202ENST00000554079 RBM23Q86U06 439 aaKnown RBP9.51□□□□□ -0.89
SIX4-202ENST00000554079 GPAT4Q86UL3 456 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 FAM35AQ86V20 835 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 ANKRD52Q8NB46 1076 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 XXYLT1Q8NBI6 393 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 CDC26Q8NHZ8 85 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 WDR48Q8TAF3 677 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 SETD6Q8TBK2 473 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 BLOC1S5Q8TDH9 187 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 CRYGNQ8WXF5 182 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 ST8SIA2Q92186 375 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 RORBQ92753 470 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 FOXJ1Q92949 421 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 MBOAT4Q96T53 435 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 KIFC3Q9BVG8 833 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 PRRG3Q9BZD7 231 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 SDCBP2Q9H190 292 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 OR51B5Q9H339 312 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 KAT8Q9H7Z6 458 aaKnown RBP9.51□□□□□ -0.89
SIX4-202ENST00000554079 TMEM8AQ9HCN3 771 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 ACSS2Q9NR19 701 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 INTS7Q9NVH2 962 aaKnown RBP9.51□□□□□ -0.89
SIX4-202ENST00000554079 EVA1BQ9NVM1 165 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 PAK5Q9P286 719 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 SRP68Q9UHB9 627 aaKnown RBP9.51□□□□□ -0.89
SIX4-202ENST00000554079 SLC23A1Q9UHI7 598 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 PSAT1Q9Y617 370 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 SHANK3Q9BYB0 1731 aa9.5□□□□□ -0.89
SIX4-202ENST00000554079 E2F8A0AVK6 867 aa9.5□□□□□ -0.89
SIX4-202ENST00000554079 SPDYE2BA6NHP3 402 aa9.5□□□□□ -0.89
SIX4-202ENST00000554079 UPK1AO00322 258 aa9.5□□□□□ -0.89
SIX4-202ENST00000554079 DSCR3O14972 297 aa9.5□□□□□ -0.89
SIX4-202ENST00000554079 NRP2O60462 931 aa9.5□□□□□ -0.89
SIX4-202ENST00000554079 LRCH4O75427 683 aa9.5□□□□□ -0.89
SIX4-202ENST00000554079 MAFO75444 373 aaPredicted RBP9.5□□□□□ -0.89
SIX4-202ENST00000554079 UGT2B17O75795 530 aa9.5□□□□□ -0.89
SIX4-202ENST00000554079 OR2B3O76000 313 aa9.5□□□□□ -0.89
SIX4-202ENST00000554079 SLC22A5O76082 557 aa9.5□□□□□ -0.89
SIX4-202ENST00000554079 LDLRP01130 860 aa9.5□□□□□ -0.89
SIX4-202ENST00000554079 C1QBP02746 253 aa9.5□□□□□ -0.89
SIX4-202ENST00000554079 FTH1P02794 183 aa9.5□□□□□ -0.89
SIX4-202ENST00000554079 ALPLP05186 524 aa9.5□□□□□ -0.89
SIX4-202ENST00000554079 SPDYE6P0CI01 402 aa9.5□□□□□ -0.89
SIX4-202ENST00000554079 IL1R1P14778 569 aa9.5□□□□□ -0.89
SIX4-202ENST00000554079 TNNI3P19429 210 aa9.5□□□□□ -0.89
SIX4-202ENST00000554079 KDELR1P24390 212 aa9.5□□□□□ -0.89
SIX4-202ENST00000554079 RPL9P32969 192 aaKnown RBP9.5□□□□□ -0.89
SIX4-202ENST00000554079 MAP2K4P45985 399 aa9.5□□□□□ -0.89
SIX4-202ENST00000554079 RAP1GAPP47736 663 aa9.5□□□□□ -0.89
SIX4-202ENST00000554079 NOVP48745 357 aa9.5□□□□□ -0.89
SIX4-202ENST00000554079 NR2C2P49116 596 aa9.5□□□□□ -0.89
SIX4-202ENST00000554079 UGT2B15P54855 530 aa9.5□□□□□ -0.89
SIX4-202ENST00000554079 SNRPD2P62316 118 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms