RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 CDH17Q12864 832 aa11.63□□□□□ -0.55
TRAFD1-209ENST00000552896 TRIP6Q15654 476 aaKnown RBP11.63□□□□□ -0.55
TRAFD1-209ENST00000552896 KCTD16Q68DU8 428 aa11.63□□□□□ -0.55
TRAFD1-209ENST00000552896 PRUNE1Q86TP1 453 aa11.63□□□□□ -0.55
TRAFD1-209ENST00000552896 TRIM74Q86UV6 250 aa11.63□□□□□ -0.55
TRAFD1-209ENST00000552896 EID2Q8N6I1 236 aa11.63□□□□□ -0.55
TRAFD1-209ENST00000552896 LMX1AQ8TE12 382 aa11.63□□□□□ -0.55
TRAFD1-209ENST00000552896 SCARF2Q96GP6 870 aaPredicted RBP11.63□□□□□ -0.55
TRAFD1-209ENST00000552896 BPIFA1Q9NP55 256 aa11.63□□□□□ -0.55
TRAFD1-209ENST00000552896 CNOT6Q9ULM6 557 aaKnown RBP11.63□□□□□ -0.55
TRAFD1-209ENST00000552896 ASXL3Q9C0F0 2248 aa11.63□□□□□ -0.55
TRAFD1-209ENST00000552896 GLYATL1P3A0A0U1RQE8 302 aa11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 TRIM38O00635 465 aa11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 GAPDHSO14556 408 aaPredicted RBP11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 TPP1O14773 563 aa11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 INPP4BO15327 924 aa11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 LDB2O43679 373 aa11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 SIGLEC6O43699 453 aa11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 TNFP01375 233 aa11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 PYGBP11216 843 aa11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 CTSEP14091 401 aa11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 TPSB2P20231 275 aa11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 MAGEA6P43360 314 aa11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 SIM1P81133 766 aaPredicted RBP11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 CDK16Q00536 496 aa11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 ITGA9Q13797 1035 aa11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 TPSAB1Q15661 275 aa11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 PROX2Q3B8N5 592 aa11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 LCE2DQ5TA82 110 aaPredicted RBP11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 ZCCHC8Q6NZY4 707 aaKnown RBP11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 DOK6Q6PKX4 331 aa11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 LVRNQ6Q4G3 990 aa11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 PPP1R21Q6ZMI0 780 aa11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 NYAP1Q6ZVC0 841 aa11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 RD3Q7Z3Z2 195 aa11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 GKN2Q86XP6 184 aa11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 CREG2Q8IUH2 290 aa11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 FAM181AQ8N9Y4 354 aa11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 OR4K2Q8NGD2 314 aa11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 OR52K1Q8NGK4 314 aa11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 SLCO2A1Q92959 643 aa11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 GLYATL1Q969I3 302 aa11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 CNDP2Q96KP4 475 aaKnown RBP11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 CAPZA3Q96KX2 299 aa11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 OR2M4Q96R27 311 aa11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 CLPBQ9H078 707 aa11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 CAAP1Q9H8G2 361 aa11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 RMI1Q9H9A7 625 aa11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 CARS2Q9HA77 564 aaKnown RBP11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 CYP4F12Q9HCS2 524 aa11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 IL26Q9NPH9 171 aa11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 MRPL40Q9NQ50 206 aaKnown RBP11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 CASS4Q9NQ75 786 aa11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 SMOXQ9NWM0 555 aa11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 NCKIPSDQ9NZQ3 722 aa11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 RNF14Q9UBS8 474 aa11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 SUFUQ9UMX1 484 aa11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 OAS3Q9Y6K5 1087 aaKnown RBP11.62□□□□□ -0.55
TRAFD1-209ENST00000552896 CEP295Q9C0D2 2601 aa11.61□□□□□ -0.55
TRAFD1-209ENST00000552896 SPAARA0A1B0GVQ0 90 aa11.61□□□□□ -0.55
TRAFD1-209ENST00000552896 AP3B1O00203 1094 aa11.61□□□□□ -0.55
TRAFD1-209ENST00000552896 BUD23O43709 281 aaKnown RBP11.61□□□□□ -0.55
TRAFD1-209ENST00000552896 DKK1O94907 266 aa11.61□□□□□ -0.55
TRAFD1-209ENST00000552896 PRAMEF1O95521 474 aa11.61□□□□□ -0.55
TRAFD1-209ENST00000552896 ECEL1O95672 775 aa11.61□□□□□ -0.55
TRAFD1-209ENST00000552896 LDOC1O95751 146 aaPredicted RBP11.61□□□□□ -0.55
TRAFD1-209ENST00000552896 KRT14P02533 472 aa11.61□□□□□ -0.55
TRAFD1-209ENST00000552896 ANXA6P08133 673 aa11.61□□□□□ -0.55
TRAFD1-209ENST00000552896 CELA2BP08218 269 aaPredicted RBP11.61□□□□□ -0.55
TRAFD1-209ENST00000552896 HADHAP40939 763 aa11.61□□□□□ -0.55
TRAFD1-209ENST00000552896 GNPDA1P46926 289 aa11.61□□□□□ -0.55
TRAFD1-209ENST00000552896 LAMB3Q13751 1172 aa11.61□□□□□ -0.55
TRAFD1-209ENST00000552896 LRP8Q14114 963 aa11.61□□□□□ -0.55
TRAFD1-209ENST00000552896 SEPT6Q14141 434 aa11.61□□□□□ -0.55
TRAFD1-209ENST00000552896 KCNJ11Q14654 390 aa11.61□□□□□ -0.55
TRAFD1-209ENST00000552896 POU6F1Q14863 301 aa11.61□□□□□ -0.55
TRAFD1-209ENST00000552896 DEFB133Q30KQ1 61 aa11.61□□□□□ -0.55
TRAFD1-209ENST00000552896 ATP13A5Q4VNC0 1218 aa11.61□□□□□ -0.55
TRAFD1-209ENST00000552896 C6orf132Q5T0Z8 1188 aa11.61□□□□□ -0.55
TRAFD1-209ENST00000552896 FAM151BQ6UXP7 276 aa11.61□□□□□ -0.55
TRAFD1-209ENST00000552896 DNAAF3Q8N9W5 541 aa11.61□□□□□ -0.55
TRAFD1-209ENST00000552896 DDHD1Q8NEL9 900 aa11.61□□□□□ -0.55
TRAFD1-209ENST00000552896 GPBAR1Q8TDU6 330 aa11.61□□□□□ -0.55
TRAFD1-209ENST00000552896 RUNDC3BQ96NL0 473 aa11.61□□□□□ -0.55
TRAFD1-209ENST00000552896 RANBP9Q96S59 729 aa11.61□□□□□ -0.55
TRAFD1-209ENST00000552896 BOCQ9BWV1 1114 aa11.61□□□□□ -0.55
TRAFD1-209ENST00000552896 ZCCHC2Q9C0B9 1178 aaKnown RBP11.61□□□□□ -0.55
TRAFD1-209ENST00000552896 EVA1BQ9NVM1 165 aa11.61□□□□□ -0.55
TRAFD1-209ENST00000552896 TRNAU1APQ9NX07 287 aaKnown RBP11.61□□□□□ -0.55
TRAFD1-209ENST00000552896 TOR4AQ9NXH8 423 aa11.61□□□□□ -0.55
TRAFD1-209ENST00000552896 PCYOX1Q9UHG3 505 aa11.61□□□□□ -0.55
TRAFD1-209ENST00000552896 MOSPD1Q9UJG1 213 aa11.61□□□□□ -0.55
TRAFD1-209ENST00000552896 APPL1Q9UKG1 709 aa11.61□□□□□ -0.55
TRAFD1-209ENST00000552896 APOBEC2Q9Y235 224 aaKnown RBP11.61□□□□□ -0.55
TRAFD1-209ENST00000552896 NEU2Q9Y3R4 380 aa11.61□□□□□ -0.55
TRAFD1-209ENST00000552896 LY6G6EA0A0G2JKS1 128 aa11.6□□□□□ -0.55
TRAFD1-209ENST00000552896 HEATR9A2RTY3 570 aa11.6□□□□□ -0.55
TRAFD1-209ENST00000552896 MROH6A6NGR9 719 aa11.6□□□□□ -0.55
TRAFD1-209ENST00000552896 H7C0S8 307 aa11.6□□□□□ -0.55
TRAFD1-209ENST00000552896 CCDC188H7C350 402 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms