RNA–Protein interactions for RNA: ENST00000552783.5

LIMA1-214, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-214ENST00000552783 SLC22A16Q86VW1 577 aa4.84□□□□□ -1.64
LIMA1-214ENST00000552783 AQP12AQ8IXF9 295 aa4.84□□□□□ -1.64
LIMA1-214ENST00000552783 GPRC5AQ8NFJ5 357 aa4.84□□□□□ -1.64
LIMA1-214ENST00000552783 OR10Q1Q8NGQ4 319 aa4.84□□□□□ -1.64
LIMA1-214ENST00000552783 CCDC97Q96F63 343 aaPredicted RBP4.84□□□□□ -1.64
LIMA1-214ENST00000552783 NSMCE3Q96MG7 304 aa4.84□□□□□ -1.64
LIMA1-214ENST00000552783 ZFP42Q96MM3 310 aa4.84□□□□□ -1.64
LIMA1-214ENST00000552783 CLSTN3Q9BQT9 956 aa4.84□□□□□ -1.64
LIMA1-214ENST00000552783 HGH1Q9BTY7 390 aa4.84□□□□□ -1.64
LIMA1-214ENST00000552783 BEGAINQ9BUH8 593 aa4.84□□□□□ -1.64
LIMA1-214ENST00000552783 TOR3AQ9H497 397 aa4.84□□□□□ -1.64
LIMA1-214ENST00000552783 ALG2Q9H553 416 aa4.84□□□□□ -1.64
LIMA1-214ENST00000552783 NDFIP2Q9NV92 336 aa4.84□□□□□ -1.64
LIMA1-214ENST00000552783 POLR3BQ9NW08 1133 aaPredicted RBP4.84□□□□□ -1.64
LIMA1-214ENST00000552783 NOD1Q9Y239 953 aa4.84□□□□□ -1.64
LIMA1-214ENST00000552783 TIMM22Q9Y584 194 aa4.84□□□□□ -1.64
LIMA1-214ENST00000552783 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.83□□□□□ -1.64
LIMA1-214ENST00000552783 M0QZ92 97 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 PMPCBO75439 489 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 ALPLP05186 524 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 HSD17B1P14061 328 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 IL12AP29459 219 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 LEPRP48357 1165 aaKnown RBP4.83□□□□□ -1.64
LIMA1-214ENST00000552783 HK2P52789 917 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 FRG1Q14331 258 aaKnown RBP4.83□□□□□ -1.64
LIMA1-214ENST00000552783 PTPRCAPQ14761 206 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 INAQ16352 499 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 THOC7Q6I9Y2 204 aaKnown RBP4.83□□□□□ -1.64
LIMA1-214ENST00000552783 PKN3Q6P5Z2 889 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 NOTUMQ6P988 496 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 CCDC80Q76M96 950 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 STRADAQ7RTN6 431 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 SLCO6A1Q86UG4 719 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 STK32CQ86UX6 486 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 ANKRD13BQ86YJ7 626 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 SCN4BQ8IWT1 228 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 CHDHQ8NE62 594 aaPredicted RBP4.83□□□□□ -1.64
LIMA1-214ENST00000552783 CNIH3Q8TBE1 160 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 RAB2BQ8WUD1 216 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 TMBIM1Q969X1 311 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 ZBED3Q96IU2 234 aaPredicted RBP4.83□□□□□ -1.64
LIMA1-214ENST00000552783 TNIP3Q96KP6 325 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 TEKT5Q96M29 485 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 MBOAT4Q96T53 435 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 NPY6RQ99463 290 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 WDR6Q9NNW5 1121 aaKnown RBP4.83□□□□□ -1.64
LIMA1-214ENST00000552783 PALMDQ9NP74 551 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 CD320Q9NPF0 282 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.83□□□□□ -1.64
LIMA1-214ENST00000552783 PKD2L2Q9NZM6 624 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 TMEM9Q9P0T7 183 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 RBPJLQ9UBG7 517 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 ZNF639Q9UID6 485 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 PNMA8BQ9ULN7 279 aaPredicted RBP4.83□□□□□ -1.64
LIMA1-214ENST00000552783 B3GNT3Q9Y2A9 372 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 BRCA1P38398 1863 aaKnown RBP4.83□□□□□ -1.64
LIMA1-214ENST00000552783 CCL15-CCL14A0A0B4J2E2 113 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 YJEFN3A6XGL0 299 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 AGRPO00253 132 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 SSX4O60224 188 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 UGT2B11O75310 529 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 LRIG2O94898 1065 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 KCNK2O95069 426 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 C22orf31O95567 290 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 UGT2B4P06133 528 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 HGFP14210 728 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 JUNBP17275 347 aaPredicted RBP4.83□□□□□ -1.64
LIMA1-214ENST00000552783 PCMT1P22061 227 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 EEF1DP29692 281 aaKnown RBP4.83□□□□□ -1.64
LIMA1-214ENST00000552783 CD6P30203 668 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 TTKP33981 857 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 ADRA1BP35368 520 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 SLC26A2P50443 739 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 TKTL1P51854 596 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 NEK2P51955 445 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 ARSFP54793 590 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 DNAJB13P59910 316 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 UFM1P61960 85 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 NCS1P62166 190 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 BEX3Q00994 111 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 CD47Q08722 323 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 BST2Q10589 180 aaKnown RBP4.83□□□□□ -1.64
LIMA1-214ENST00000552783 CDH17Q12864 832 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 SEMA3BQ13214 749 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 INPP5AQ14642 412 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 CBX2Q14781 532 aaPredicted RBP4.83□□□□□ -1.64
LIMA1-214ENST00000552783 LAPTM4AQ15012 233 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 CCL15Q16663 113 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 ZNF484Q5JVG2 852 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 HABP4Q5JVS0 413 aaKnown RBP4.83□□□□□ -1.64
LIMA1-214ENST00000552783 ZNF678Q5SXM1 525 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 AGAP7PQ5VUJ5 663 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 KIAA0319Q5VV43 1072 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 HACD2Q6Y1H2 254 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 RNF19BQ6ZMZ0 732 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 PAQR9Q6ZVX9 377 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 PDZD4Q76G19 769 aaPredicted RBP4.83□□□□□ -1.64
LIMA1-214ENST00000552783 PLPPR4Q7Z2D5 763 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 BNIPLQ7Z465 357 aa4.83□□□□□ -1.64
LIMA1-214ENST00000552783 TMEM179BQ7Z7N9 219 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms