RNA–Protein interactions for RNA: ENST00000552374.6

TMEM116-215, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM116, Length 1,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-215ENST00000552374 CHST15Q7LFX5 561 aaPredicted RBP10.84□□□□□ -0.67
TMEM116-215ENST00000552374 PEX26Q7Z412 305 aa10.84□□□□□ -0.67
TMEM116-215ENST00000552374 CCNJLQ8IV13 435 aa10.84□□□□□ -0.67
TMEM116-215ENST00000552374 TMEM139Q8IV31 216 aa10.84□□□□□ -0.67
TMEM116-215ENST00000552374 LSMEM2Q8N112 164 aa10.84□□□□□ -0.67
TMEM116-215ENST00000552374 LRRC57Q8N9N7 239 aa10.84□□□□□ -0.67
TMEM116-215ENST00000552374 IPMKQ8NFU5 416 aa10.84□□□□□ -0.67
TMEM116-215ENST00000552374 ACTL9Q8TC94 416 aa10.84□□□□□ -0.67
TMEM116-215ENST00000552374 PATE1Q8WXA2 126 aa10.84□□□□□ -0.67
TMEM116-215ENST00000552374 SCARF2Q96GP6 870 aaPredicted RBP10.84□□□□□ -0.67
TMEM116-215ENST00000552374 NAF1Q96HR8 494 aaKnown RBP10.84□□□□□ -0.67
TMEM116-215ENST00000552374 QKIQ96PU8 341 aaKnown RBP eCLIP10.84□□□□□ -0.679e-7■■■■■ 39
TMEM116-215ENST00000552374 OR2M4Q96R27 311 aa10.84□□□□□ -0.67
TMEM116-215ENST00000552374 FCRL5Q96RD9 977 aa10.84□□□□□ -0.67
TMEM116-215ENST00000552374 GFM1Q96RP9 751 aaKnown RBP10.84□□□□□ -0.67
TMEM116-215ENST00000552374 VAT1Q99536 393 aa10.84□□□□□ -0.67
TMEM116-215ENST00000552374 FERMT1Q9BQL6 677 aa10.84□□□□□ -0.67
TMEM116-215ENST00000552374 HERPUD2Q9BSE4 406 aa10.84□□□□□ -0.67
TMEM116-215ENST00000552374 FOXP3Q9BZS1 431 aa10.84□□□□□ -0.67
TMEM116-215ENST00000552374 CDH19Q9H159 772 aa10.84□□□□□ -0.67
TMEM116-215ENST00000552374 TRHDEQ9UKU6 1024 aa10.84□□□□□ -0.67
TMEM116-215ENST00000552374 ATXN7L1Q9ULK2 861 aaPredicted RBP10.84□□□□□ -0.67
TMEM116-215ENST00000552374 LHX6Q9UPM6 363 aa10.84□□□□□ -0.67
TMEM116-215ENST00000552374 ZNF711Q9Y462 761 aa10.84□□□□□ -0.67
TMEM116-215ENST00000552374 DSPP15924 2871 aaKnown RBP10.83□□□□□ -0.68
TMEM116-215ENST00000552374 PKD1L2Q7Z442 2459 aa10.83□□□□□ -0.68
TMEM116-215ENST00000552374 LOC285095A0A1B0GVY8 99 aa10.83□□□□□ -0.68
TMEM116-215ENST00000552374 A0A1W2PQM1 296 aa10.83□□□□□ -0.68
TMEM116-215ENST00000552374 NUDT21O43809 227 aaKnown RBP10.83□□□□□ -0.68
TMEM116-215ENST00000552374 TJP3O95049 919 aa10.83□□□□□ -0.68
TMEM116-215ENST00000552374 SLC25A14O95258 325 aaPredicted RBP10.83□□□□□ -0.68
TMEM116-215ENST00000552374 FTCDO95954 541 aa10.83□□□□□ -0.68
TMEM116-215ENST00000552374 ITPKBP27987 946 aa10.83□□□□□ -0.68
TMEM116-215ENST00000552374 RBMS1P29558 406 aaKnown RBP10.83□□□□□ -0.68
TMEM116-215ENST00000552374 EIF2S3P41091 472 aaKnown RBP10.83□□□□□ -0.68
TMEM116-215ENST00000552374 CHRNA4P43681 627 aa10.83□□□□□ -0.68
TMEM116-215ENST00000552374 OR1D5P58170 312 aa10.83□□□□□ -0.68
TMEM116-215ENST00000552374 EIF3EP60228 445 aaKnown RBP10.83□□□□□ -0.68
TMEM116-215ENST00000552374 PEX6Q13608 980 aa10.83□□□□□ -0.68
TMEM116-215ENST00000552374 SLC14A2Q15849 920 aa10.83□□□□□ -0.68
TMEM116-215ENST00000552374 TBC1D25Q3MII6 688 aa10.83□□□□□ -0.68
TMEM116-215ENST00000552374 SIRPB2Q5JXA9 342 aa10.83□□□□□ -0.68
TMEM116-215ENST00000552374 HENMT1Q5T8I9 393 aaKnown RBP10.83□□□□□ -0.68
TMEM116-215ENST00000552374 KDELC1Q6UW63 502 aa10.83□□□□□ -0.68
TMEM116-215ENST00000552374 USP53Q70EK8 1073 aa10.83□□□□□ -0.68
TMEM116-215ENST00000552374 SYCE1Q8N0S2 351 aa10.83□□□□□ -0.68
TMEM116-215ENST00000552374 TXLNBQ8N3L3 684 aa10.83□□□□□ -0.68
TMEM116-215ENST00000552374 ARL14Q8N4G2 192 aa10.83□□□□□ -0.68
TMEM116-215ENST00000552374 UBL4BQ8N7F7 174 aa10.83□□□□□ -0.68
TMEM116-215ENST00000552374 ALG3Q92685 438 aa10.83□□□□□ -0.68
TMEM116-215ENST00000552374 GRAMD1AQ96CP6 724 aa10.83□□□□□ -0.68
TMEM116-215ENST00000552374 OXNAD1Q96HP4 312 aaPredicted RBP10.83□□□□□ -0.68
TMEM116-215ENST00000552374 MRGPRX2Q96LB1 330 aa10.83□□□□□ -0.68
TMEM116-215ENST00000552374 SRPK1Q96SB4 655 aaKnown RBP10.83□□□□□ -0.68
TMEM116-215ENST00000552374 EPB41L5Q9HCM4 733 aa10.83□□□□□ -0.68
TMEM116-215ENST00000552374 RAD18Q9NS91 495 aa10.83□□□□□ -0.68
TMEM116-215ENST00000552374 RSPH14Q9UHP6 348 aa10.83□□□□□ -0.68
TMEM116-215ENST00000552374 APPL1Q9UKG1 709 aa10.83□□□□□ -0.68
TMEM116-215ENST00000552374 PACSIN2Q9UNF0 486 aaPredicted RBP10.83□□□□□ -0.68
TMEM116-215ENST00000552374 EFR3BQ9Y2G0 817 aa10.83□□□□□ -0.68
TMEM116-215ENST00000552374 SPO11Q9Y5K1 396 aa10.83□□□□□ -0.68
TMEM116-215ENST00000552374 A0A087WV48 116 aa10.82□□□□□ -0.68
TMEM116-215ENST00000552374 A0A1W2PNU3 283 aaPredicted RBP10.82□□□□□ -0.68
TMEM116-215ENST00000552374 PMS2P1A4D2B8 440 aa10.82□□□□□ -0.68
TMEM116-215ENST00000552374 KCNN4O15554 427 aa10.82□□□□□ -0.68
TMEM116-215ENST00000552374 B4GAT1O43505 415 aa10.82□□□□□ -0.68
TMEM116-215ENST00000552374 SNX2O60749 519 aa10.82□□□□□ -0.68
TMEM116-215ENST00000552374 DNAJC6O75061 913 aa10.82□□□□□ -0.68
TMEM116-215ENST00000552374 AGTP01019 485 aa10.82□□□□□ -0.68
TMEM116-215ENST00000552374 EPOP01588 193 aa10.82□□□□□ -0.68
TMEM116-215ENST00000552374 PNLIPP16233 465 aa10.82□□□□□ -0.68
TMEM116-215ENST00000552374 ZNF8P17098 575 aaPredicted RBP10.82□□□□□ -0.68
TMEM116-215ENST00000552374 BPIP17213 487 aa10.82□□□□□ -0.68
TMEM116-215ENST00000552374 PPM1FP49593 454 aaPredicted RBP10.82□□□□□ -0.68
TMEM116-215ENST00000552374 B4GALNT1Q00973 533 aa10.82□□□□□ -0.68
TMEM116-215ENST00000552374 CCDC173Q0VFZ6 552 aa10.82□□□□□ -0.68
TMEM116-215ENST00000552374 MPP3Q13368 585 aa10.82□□□□□ -0.68
TMEM116-215ENST00000552374 SLC1A5Q15758 541 aa10.82□□□□□ -0.68
TMEM116-215ENST00000552374 SPRED1Q7Z699 444 aa10.82□□□□□ -0.68
TMEM116-215ENST00000552374 B3GNT8Q7Z7M8 397 aa10.82□□□□□ -0.68
TMEM116-215ENST00000552374 NAGSQ8N159 534 aa10.82□□□□□ -0.68
TMEM116-215ENST00000552374 WDR36Q8NI36 951 aaKnown RBP10.82□□□□□ -0.68
TMEM116-215ENST00000552374 BLOC1S5Q8TDH9 187 aa10.82□□□□□ -0.68
TMEM116-215ENST00000552374 ZNF578Q96N58 590 aaPredicted RBP10.82□□□□□ -0.68
TMEM116-215ENST00000552374 ZSCAN5AQ9BUG6 496 aa10.82□□□□□ -0.68
TMEM116-215ENST00000552374 FSD1LQ9BXM9 530 aa10.82□□□□□ -0.68
TMEM116-215ENST00000552374 STRADBQ9C0K7 418 aa10.82□□□□□ -0.68
TMEM116-215ENST00000552374 OR2AG1Q9H205 316 aa10.82□□□□□ -0.68
TMEM116-215ENST00000552374 TRIM39Q9HCM9 518 aa10.82□□□□□ -0.68
TMEM116-215ENST00000552374 ATXN10Q9UBB4 475 aa10.82□□□□□ -0.68
TMEM116-215ENST00000552374 PCYT1BQ9Y5K3 369 aaPredicted RBP10.82□□□□□ -0.68
TMEM116-215ENST00000552374 LRRK1Q38SD2 2015 aa10.82□□□□□ -0.68
TMEM116-215ENST00000552374 RP1P56715 2156 aa10.81□□□□□ -0.68
TMEM116-215ENST00000552374 ANKRD36A6QL64 1941 aa10.81□□□□□ -0.68
TMEM116-215ENST00000552374 D6RAR5 112 aa10.81□□□□□ -0.68
TMEM116-215ENST00000552374 TMX2-CTNND1H3BSU7 103 aa10.81□□□□□ -0.68
TMEM116-215ENST00000552374 PPM1DO15297 605 aa10.81□□□□□ -0.68
TMEM116-215ENST00000552374 ZW10O43264 779 aa10.81□□□□□ -0.68
TMEM116-215ENST00000552374 GRID2O43424 1007 aa10.81□□□□□ -0.68
TMEM116-215ENST00000552374 BUD23O43709 281 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms