RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 TRBC1P01850 177 aa21.44■■□□□ 1.02
SMARCD1-212ENST00000551966 MAPK9P45984 424 aa21.44■■□□□ 1.02
SMARCD1-212ENST00000551966 STC1P52823 247 aa21.44■■□□□ 1.02
SMARCD1-212ENST00000551966 EPHA4P54764 986 aa21.44■■□□□ 1.02
SMARCD1-212ENST00000551966 SEPT6Q14141 434 aa21.44■■□□□ 1.02
SMARCD1-212ENST00000551966 MAP7Q14244 749 aa21.44■■□□□ 1.02
SMARCD1-212ENST00000551966 DPYSL2Q16555 572 aa21.44■■□□□ 1.02
SMARCD1-212ENST00000551966 TMCO3Q6UWJ1 677 aa21.44■■□□□ 1.02
SMARCD1-212ENST00000551966 APTXQ7Z2E3 356 aaKnown RBP21.44■■□□□ 1.02
SMARCD1-212ENST00000551966 BBS5Q8N3I7 341 aa21.44■■□□□ 1.02
SMARCD1-212ENST00000551966 ESX1Q8N693 406 aa21.44■■□□□ 1.02
SMARCD1-212ENST00000551966 TEX26Q8N6G2 289 aa21.44■■□□□ 1.02
SMARCD1-212ENST00000551966 SH3KBP1Q96B97 665 aa21.44■■□□□ 1.02
SMARCD1-212ENST00000551966 NT5MQ9NPB1 228 aa21.44■■□□□ 1.02
SMARCD1-212ENST00000551966 KCNK6Q9Y257 313 aa21.44■■□□□ 1.02
SMARCD1-212ENST00000551966 KCTD3Q9Y597 815 aa21.44■■□□□ 1.02
SMARCD1-212ENST00000551966 NBPF19A0A087WUL8 3843 aa21.43■■□□□ 1.02
SMARCD1-212ENST00000551966 H3BRJ5 948 aa21.43■■□□□ 1.02
SMARCD1-212ENST00000551966 CLDN7O95471 211 aa21.43■■□□□ 1.02
SMARCD1-212ENST00000551966 ATP1A3P13637 1013 aa21.43■■□□□ 1.02
SMARCD1-212ENST00000551966 ZNF30P17039 623 aa21.43■■□□□ 1.02
SMARCD1-212ENST00000551966 SMTNL2Q2TAL5 461 aa21.43■■□□□ 1.02
SMARCD1-212ENST00000551966 TCTN3Q6NUS6 607 aa21.43■■□□□ 1.02
SMARCD1-212ENST00000551966 SLC9B2Q86UD5 537 aa21.43■■□□□ 1.02
SMARCD1-212ENST00000551966 CSPG4P5Q96PW8 444 aa21.43■■□□□ 1.02
SMARCD1-212ENST00000551966 OGFRQ9NZT2 677 aa21.43■■□□□ 1.02
SMARCD1-212ENST00000551966 VPS18Q9P253 973 aa21.43■■□□□ 1.02
SMARCD1-212ENST00000551966 USP9YO00507 2555 aaPredicted RBP21.43■■□□□ 1.02
SMARCD1-212ENST00000551966 UTP20O75691 2785 aaKnown RBP21.42■■□□□ 1.02
SMARCD1-212ENST00000551966 SPENQ96T58 3664 aaKnown RBP21.42■■□□□ 1.02
SMARCD1-212ENST00000551966 PRLP01236 227 aa21.42■■□□□ 1.02
SMARCD1-212ENST00000551966 FTLP02792 175 aaPredicted RBP21.42■■□□□ 1.02
SMARCD1-212ENST00000551966 PYGLP06737 847 aa21.42■■□□□ 1.02
SMARCD1-212ENST00000551966 KRT7P08729 469 aa21.42■■□□□ 1.02
SMARCD1-212ENST00000551966 DLSTP36957 453 aa21.42■■□□□ 1.02
SMARCD1-212ENST00000551966 CDH6P55285 790 aa21.42■■□□□ 1.02
SMARCD1-212ENST00000551966 GFERP55789 205 aa21.42■■□□□ 1.02
SMARCD1-212ENST00000551966 ERV3-1Q14264 604 aa21.42■■□□□ 1.02
SMARCD1-212ENST00000551966 TXNRD3NBQ6F5E7 133 aa21.42■■□□□ 1.02
SMARCD1-212ENST00000551966 LYSMD3Q7Z3D4 306 aa21.42■■□□□ 1.02
SMARCD1-212ENST00000551966 TMEM135Q86UB9 458 aa21.42■■□□□ 1.02
SMARCD1-212ENST00000551966 NDUFAF2Q8N183 169 aa21.42■■□□□ 1.02
SMARCD1-212ENST00000551966 ATPAF2Q8N5M1 289 aa21.42■■□□□ 1.02
SMARCD1-212ENST00000551966 LRRC4CQ9HCJ2 640 aa21.42■■□□□ 1.02
SMARCD1-212ENST00000551966 CNOT8Q9UFF9 292 aaKnown RBP21.42■■□□□ 1.02
SMARCD1-212ENST00000551966 TEX15Q9BXT5 2789 aa21.41■■□□□ 1.02
SMARCD1-212ENST00000551966 FADS2P1A8MWK0 482 aa21.41■■□□□ 1.02
SMARCD1-212ENST00000551966 SNX2O60749 519 aa21.41■■□□□ 1.02
SMARCD1-212ENST00000551966 C9P02748 559 aa21.41■■□□□ 1.02
SMARCD1-212ENST00000551966 ANKRD34CP0C6C1 535 aa21.41■■□□□ 1.02
SMARCD1-212ENST00000551966 CCDC172P0C7W6 258 aa21.41■■□□□ 1.02
SMARCD1-212ENST00000551966 ACP5P13686 325 aa21.41■■□□□ 1.02
SMARCD1-212ENST00000551966 F3P13726 295 aa21.41■■□□□ 1.02
SMARCD1-212ENST00000551966 PCK1P35558 622 aa21.41■■□□□ 1.02
SMARCD1-212ENST00000551966 ARL4AP40617 200 aa21.41■■□□□ 1.02
SMARCD1-212ENST00000551966 PPP1R2P3Q6NXS1 205 aa21.41■■□□□ 1.02
SMARCD1-212ENST00000551966 TEX19Q8NA77 164 aa21.41■■□□□ 1.02
SMARCD1-212ENST00000551966 NSMCE1Q8WV22 266 aa21.41■■□□□ 1.02
SMARCD1-212ENST00000551966 HSPH1Q92598 858 aa21.41■■□□□ 1.02
SMARCD1-212ENST00000551966 LDHAL6BQ9BYZ2 381 aaPredicted RBP21.41■■□□□ 1.02
SMARCD1-212ENST00000551966 ULBP3Q9BZM4 244 aa21.41■■□□□ 1.02
SMARCD1-212ENST00000551966 PRDM8Q9NQV8 689 aa21.41■■□□□ 1.02
SMARCD1-212ENST00000551966 CPNE7Q9UBL6 633 aa21.41■■□□□ 1.02
SMARCD1-212ENST00000551966 CROTQ9UKG9 612 aa21.41■■□□□ 1.02
SMARCD1-212ENST00000551966 CHKBQ9Y259 395 aa21.41■■□□□ 1.02
SMARCD1-212ENST00000551966 MN1Q10571 1320 aaPredicted RBP21.4■■□□□ 1.02
SMARCD1-212ENST00000551966 RARAP10276 462 aa21.4■■□□□ 1.02
SMARCD1-212ENST00000551966 SH3BP2P78314 561 aa21.4■■□□□ 1.02
SMARCD1-212ENST00000551966 FOXM1Q08050 763 aa21.4■■□□□ 1.02
SMARCD1-212ENST00000551966 ITKQ08881 620 aa21.4■■□□□ 1.02
SMARCD1-212ENST00000551966 BOLA3Q53S33 107 aa21.4■■□□□ 1.02
SMARCD1-212ENST00000551966 C6orf15Q6UXA7 325 aaPredicted RBP21.4■■□□□ 1.02
SMARCD1-212ENST00000551966 ATCAYQ86WG3 371 aa21.4■■□□□ 1.02
SMARCD1-212ENST00000551966 PLXDC1Q8IUK5 500 aa21.4■■□□□ 1.02
SMARCD1-212ENST00000551966 CCDC13Q8IYE1 715 aa21.4■■□□□ 1.02
SMARCD1-212ENST00000551966 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.4■■□□□ 1.02
SMARCD1-212ENST00000551966 GALNT6Q8NCL4 622 aa21.4■■□□□ 1.02
SMARCD1-212ENST00000551966 C9orf72Q96LT7 481 aa21.4■■□□□ 1.02
SMARCD1-212ENST00000551966 PLEKHG4BQ96PX9 1271 aa21.4■■□□□ 1.02
SMARCD1-212ENST00000551966 HERPUD2Q9BSE4 406 aa21.4■■□□□ 1.02
SMARCD1-212ENST00000551966 HSD3B7Q9H2F3 369 aa21.4■■□□□ 1.02
SMARCD1-212ENST00000551966 STN1Q9H668 368 aaKnown RBP21.4■■□□□ 1.02
SMARCD1-212ENST00000551966 SCHIP1Q9P0W5 487 aaPredicted RBP21.4■■□□□ 1.02
SMARCD1-212ENST00000551966 TLK1Q9UKI8 766 aa21.4■■□□□ 1.02
SMARCD1-212ENST00000551966 PCDHB3Q9Y5E6 796 aa21.4■■□□□ 1.02
SMARCD1-212ENST00000551966 KIR2DS5A0A0G2JLQ3 304 aa21.39■■□□□ 1.01
SMARCD1-212ENST00000551966 A0A0G2JNG1 304 aa21.39■■□□□ 1.01
SMARCD1-212ENST00000551966 MKRN2OSH3BPM6 223 aa21.39■■□□□ 1.01
SMARCD1-212ENST00000551966 KIR2DS3K7RE56 304 aa21.39■■□□□ 1.01
SMARCD1-212ENST00000551966 PDGFAP04085 211 aa21.39■■□□□ 1.01
SMARCD1-212ENST00000551966 IL4RP24394 825 aa21.39■■□□□ 1.01
SMARCD1-212ENST00000551966 UQCRFS1P47985 274 aa21.39■■□□□ 1.01
SMARCD1-212ENST00000551966 UBE2IP63279 158 aaKnown RBP21.39■■□□□ 1.01
SMARCD1-212ENST00000551966 DSC2Q02487 901 aa21.39■■□□□ 1.01
SMARCD1-212ENST00000551966 KIR2DS5Q14953 304 aa21.39■■□□□ 1.01
SMARCD1-212ENST00000551966 ASB18Q6ZVZ8 466 aa21.39■■□□□ 1.01
SMARCD1-212ENST00000551966 ZNF571Q7Z3V5 609 aaPredicted RBP21.39■■□□□ 1.01
SMARCD1-212ENST00000551966 EPB41L1Q9H4G0 881 aa21.39■■□□□ 1.01
SMARCD1-212ENST00000551966 RMI1Q9H9A7 625 aa21.39■■□□□ 1.01
SMARCD1-212ENST00000551966 PCDH18Q9HCL0 1135 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms