RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 FAM90A14PP0C7W9 464 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 NR2F6P10588 404 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 CKMT1AP12532 417 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 CD59P13987 128 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 GCFC2P16383 781 aaKnown RBP2.49□□□□□ -2.01
CPSF6-207ENST00000551516 ZFXP17010 805 aaPredicted RBP2.49□□□□□ -2.01
CPSF6-207ENST00000551516 ZNF37AP17032 561 aaPredicted RBP2.49□□□□□ -2.01
CPSF6-207ENST00000551516 NDUFB7P17568 137 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 PTPN2P17706 415 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 CSRP1P21291 193 aaKnown RBP2.49□□□□□ -2.01
CPSF6-207ENST00000551516 ADRA1DP25100 572 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 CNTFP26441 200 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 ADSSP30520 456 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 GKP32189 559 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 HTR7P34969 479 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 PBX1P40424 430 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 FOLR3P41439 243 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 NAMPTP43490 491 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 AVPR1BP47901 424 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 MCM2P49736 904 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 PGFP49763 221 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 CCR3P51677 355 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 CLCN2P51788 898 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 PRKAA2P54646 552 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 TPTEP56180 551 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 IRX4P78413 519 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 CYP4A11Q02928 519 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 SF3A3Q12874 501 aaKnown RBP eCLIP2.49□□□□□ -2.016e-6■■■□□ 15.2
CPSF6-207ENST00000551516 TRPC3Q13507 836 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 SLC12A1Q13621 1099 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 TUBA3CQ13748 450 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 ENPP2Q13822 863 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 CBFBQ13951 182 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 KCNJ12Q14500 433 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 PTPAQ15257 358 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 ANKRD1Q15327 319 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 TEAD2Q15562 447 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 LPAL2Q16609 132 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 ME3Q16798 604 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 CCDC142Q17RM4 750 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 GLRA4Q5JXX5 417 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 KAZNQ674X7 775 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 TPGS2Q68CL5 300 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 PMS2CLQ68D20 193 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 CCDC144NLQ6NUI1 221 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 MSANTD2Q6P1R3 559 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 PDXDC1Q6P996 788 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 TUBA3EQ6PEY2 450 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 CASC1Q6TDU7 716 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 SYNE3Q6ZMZ3 975 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 PARS2Q7L3T8 475 aaKnown RBP2.49□□□□□ -2.01
CPSF6-207ENST00000551516 MAVSQ7Z434 540 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 DNAJB7Q7Z6W7 309 aaPredicted RBP2.49□□□□□ -2.01
CPSF6-207ENST00000551516 NEK8Q86SG6 692 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 RALGPS2Q86X27 583 aaPredicted RBP2.49□□□□□ -2.01
CPSF6-207ENST00000551516 ATAD1Q8NBU5 361 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 CSGALNACT1Q8TDX6 532 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 PIGOQ8TEQ8 1089 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 DEPDC1BQ8WUY9 529 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 PSMG2Q969U7 264 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 R3HDM4Q96D70 268 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 MAELQ96JY0 434 aaKnown RBP2.49□□□□□ -2.01
CPSF6-207ENST00000551516 FAR2Q96K12 515 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 ZFYVE19Q96K21 471 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 Q96MF0 132 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 COG8Q96MW5 612 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 AIFM2Q9BRQ8 373 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 TRMT61BQ9BVS5 477 aaKnown RBP2.49□□□□□ -2.01
CPSF6-207ENST00000551516 C1QTNF3Q9BXJ4 246 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 POLR3FQ9H1D9 316 aaPredicted RBP2.49□□□□□ -2.01
CPSF6-207ENST00000551516 IKZF4Q9H2S9 585 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 LINC00597Q9H2U6 94 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 MFSD1Q9H3U5 465 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 CHODLQ9H9P2 273 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 ZFP14Q9HCL3 533 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 FSCN3Q9NQT6 498 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 PRMT7Q9NVM4 692 aaPredicted RBP2.49□□□□□ -2.01
CPSF6-207ENST00000551516 IL37Q9NZH6 218 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 MGAT4CQ9UBM8 478 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 DKK3Q9UBP4 350 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 DDX25Q9UHL0 483 aaKnown RBP2.49□□□□□ -2.01
CPSF6-207ENST00000551516 DAPP1Q9UN19 280 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 CRYL1Q9Y2S2 319 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 DERAQ9Y315 318 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 UBE2J1Q9Y385 318 aaPredicted RBP2.49□□□□□ -2.01
CPSF6-207ENST00000551516 REXO2Q9Y3B8 237 aaKnown RBP2.49□□□□□ -2.01
CPSF6-207ENST00000551516 SLCO1B1Q9Y6L6 691 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 PIAS3Q9Y6X2 628 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 TLN1Q9Y490 2541 aaKnown RBP2.49□□□□□ -2.01
CPSF6-207ENST00000551516 URB1O60287 2271 aaKnown RBP2.49□□□□□ -2.01
CPSF6-207ENST00000551516 USP9YO00507 2555 aaPredicted RBP2.49□□□□□ -2.01
CPSF6-207ENST00000551516 LRRK2Q5S007 2527 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 WDR81Q562E7 1941 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 MTCL1Q9Y4B5 1905 aaKnown RBP2.48□□□□□ -2.01
CPSF6-207ENST00000551516 TBC1D3DA0A087WVF3 549 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 TBC1D3IA0A087WXS9 549 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 TBC1D3EA0A087X179 549 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 TBC1D3KA0A087X1G2 549 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 CCDC196A0A1B0GTZ2 297 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 A0A1W2PQF6 199 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms