RNA–Protein interactions for RNA: ENST00000551260.5

RACGAP1-223, Transcript of Rac GTPase activating protein 1, human

TSL 4

Gene RACGAP1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-223	ENST00000551260	PCDH1	Q08174	1060 aa		5.87	□□□□□ -1.47
RACGAP1-223	ENST00000551260	BST2	Q10589	180 aa	Known RBP	5.87	□□□□□ -1.47
RACGAP1-223	ENST00000551260	AUH	Q13825	339 aa	Known RBP	5.87	□□□□□ -1.47
RACGAP1-223	ENST00000551260	ALF	Q53S48	1182 aa		5.87	□□□□□ -1.47
RACGAP1-223	ENST00000551260	MCTP1	Q6DN14	999 aa		5.87	□□□□□ -1.47
RACGAP1-223	ENST00000551260	PMF1	Q6P1K2	205 aa		5.87	□□□□□ -1.47
RACGAP1-223	ENST00000551260	WDR74	Q6RFH5	385 aa	Predicted RBP	5.87	□□□□□ -1.47
RACGAP1-223	ENST00000551260	MEX3B	Q6ZN04	569 aa	Known RBP	5.87	□□□□□ -1.47
RACGAP1-223	ENST00000551260		Q6ZS92	163 aa		5.87	□□□□□ -1.47
RACGAP1-223	ENST00000551260	SV2B	Q7L1I2	683 aa		5.87	□□□□□ -1.47
RACGAP1-223	ENST00000551260	EPM2AIP1	Q7L775	607 aa	Predicted RBP	5.87	□□□□□ -1.47
RACGAP1-223	ENST00000551260	SCML4	Q8N228	414 aa		5.87	□□□□□ -1.47
RACGAP1-223	ENST00000551260	ARMC10	Q8N2F6	343 aa		5.87	□□□□□ -1.47
RACGAP1-223	ENST00000551260	NETO2	Q8NC67	525 aa		5.87	□□□□□ -1.47
RACGAP1-223	ENST00000551260	OR10G6	Q8NH81	332 aa		5.87	□□□□□ -1.47
RACGAP1-223	ENST00000551260	ATL2	Q8NHH9	583 aa		5.87	□□□□□ -1.47
RACGAP1-223	ENST00000551260	DNAJB8	Q8NHS0	232 aa		5.87	□□□□□ -1.47
RACGAP1-223	ENST00000551260	ZNF507	Q8TCN5	953 aa		5.87	□□□□□ -1.47
RACGAP1-223	ENST00000551260	TAS1R2	Q8TE23	839 aa		5.87	□□□□□ -1.47
RACGAP1-223	ENST00000551260	EPS8L3	Q8TE67	593 aa	Known RBP	5.87	□□□□□ -1.47
RACGAP1-223	ENST00000551260	FAR1	Q8WVX9	515 aa		5.87	□□□□□ -1.47
RACGAP1-223	ENST00000551260	FAM46A	Q96IP4	442 aa	Known RBP	5.87	□□□□□ -1.47
RACGAP1-223	ENST00000551260	SLC38A3	Q99624	504 aa		5.87	□□□□□ -1.47
RACGAP1-223	ENST00000551260	CLEC4M	Q9H2X3	399 aa	Predicted RBP	5.87	□□□□□ -1.47
RACGAP1-223	ENST00000551260	CARS2	Q9HA77	564 aa	Known RBP	5.87	□□□□□ -1.47
RACGAP1-223	ENST00000551260	CISH	Q9NSE2	258 aa		5.87	□□□□□ -1.47
RACGAP1-223	ENST00000551260	COX16	Q9P0S2	106 aa		5.87	□□□□□ -1.47
RACGAP1-223	ENST00000551260	C5AR2	Q9P296	337 aa		5.87	□□□□□ -1.47
RACGAP1-223	ENST00000551260	SUCO	Q9UBS9	1254 aa	Known RBP	5.87	□□□□□ -1.47
RACGAP1-223	ENST00000551260	FARSA	Q9Y285	508 aa	Known RBP	5.87	□□□□□ -1.47
RACGAP1-223	ENST00000551260	TBC1D30	Q9Y2I9	924 aa		5.87	□□□□□ -1.47
RACGAP1-223	ENST00000551260	CPAMD8	Q8IZJ3	1885 aa		5.87	□□□□□ -1.47
RACGAP1-223	ENST00000551260	SON	P18583	2426 aa	Known RBP	5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	RNF212B	A8MTL3	300 aa		5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	TEX33	O43247	280 aa		5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	ZMPSTE24	O75844	475 aa		5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	EML2	O95834	649 aa		5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	RHOC	P08134	193 aa		5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	MAPK1	P28482	360 aa		5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	ADSL	P30566	484 aa	Predicted RBP	5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	GNPDA1	P46926	289 aa		5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	MEOX1	P50221	254 aa		5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	SERPINH1	P50454	418 aa	Known RBP	5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	VAMP7	P51809	220 aa		5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	AP3M2	P53677	418 aa		5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	KIAA1024L	P59773	190 aa		5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	RPS15	P62841	145 aa	Known RBP	5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	IRX6	P78412	446 aa	Predicted RBP	5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	ARF5	P84085	180 aa		5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	NFATC2	Q13469	925 aa		5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	MTM1	Q13496	603 aa		5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	ATP1A4	Q13733	1029 aa		5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	ANKRD1	Q15327	319 aa		5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	TMEM52B	Q4KMG9	183 aa		5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	RILPL1	Q5EBL4	403 aa		5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	EFHC1	Q5JVL4	640 aa		5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	LCN10	Q6JVE6	187 aa		5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	LEKR1	Q6ZMV7	388 aa		5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	TMEM200A	Q86VY9	491 aa		5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	ZBTB2	Q8N680	514 aa		5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	ARFGAP1	Q8N6T3	406 aa		5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	PCDH20	Q8N6Y1	951 aa	Known RBP	5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	ATP6V0D2	Q8N8Y2	350 aa		5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	DCAF4L2	Q8NA75	395 aa		5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	SLC37A2	Q8TED4	501 aa		5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	IRGQ	Q8WZA9	623 aa		5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	FAM149B1	Q96BN6	582 aa		5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	EEF2KMT	Q96G04	330 aa		5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	PPP1R9B	Q96SB3	815 aa		5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	SLX1A	Q9BQ83	275 aa		5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	SPON2	Q9BUD6	331 aa		5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	GPR87	Q9BY21	358 aa		5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	GSDMC	Q9BYG8	508 aa		5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	CEP41	Q9BYV8	373 aa		5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	PANK2	Q9BZ23	570 aa		5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	ZNF552	Q9H707	407 aa	Predicted RBP	5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	MMRN2	Q9H8L6	949 aa		5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	TNFRSF10D	Q9UBN6	386 aa		5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260	HS3ST4	Q9Y661	456 aa		5.86	□□□□□ -1.47
RACGAP1-223	ENST00000551260		A0A0U1RQS6	177 aa		5.85	□□□□□ -1.47
RACGAP1-223	ENST00000551260	LOC100289279	A0A1B0GTE1	492 aa		5.85	□□□□□ -1.47
RACGAP1-223	ENST00000551260	CCDC78	A2IDD5	438 aa		5.85	□□□□□ -1.47
RACGAP1-223	ENST00000551260	MEGF11	A6BM72	1044 aa		5.85	□□□□□ -1.47
RACGAP1-223	ENST00000551260	GOLGA6L3	A6NEY3	463 aa		5.85	□□□□□ -1.47
RACGAP1-223	ENST00000551260	RASA4B	C9J798	803 aa		5.85	□□□□□ -1.47
RACGAP1-223	ENST00000551260	CACNB4	O00305	520 aa	Predicted RBP	5.85	□□□□□ -1.47
RACGAP1-223	ENST00000551260	TNFRSF10C	O14798	259 aa		5.85	□□□□□ -1.47
RACGAP1-223	ENST00000551260	FANCG	O15287	622 aa		5.85	□□□□□ -1.47
RACGAP1-223	ENST00000551260	RASA4	O43374	803 aa		5.85	□□□□□ -1.47
RACGAP1-223	ENST00000551260	BUB1B	O60566	1050 aa	Predicted RBP	5.85	□□□□□ -1.47
RACGAP1-223	ENST00000551260	CLDN11	O75508	207 aa		5.85	□□□□□ -1.47
RACGAP1-223	ENST00000551260	LY6G6D	O95868	133 aa		5.85	□□□□□ -1.47
RACGAP1-223	ENST00000551260	TRUB2	O95900	331 aa	Known RBP	5.85	□□□□□ -1.47
RACGAP1-223	ENST00000551260	IGLV3-25	P01717	112 aa		5.85	□□□□□ -1.47
RACGAP1-223	ENST00000551260	HEXA	P06865	529 aa		5.85	□□□□□ -1.47
RACGAP1-223	ENST00000551260	INHBB	P09529	407 aa		5.85	□□□□□ -1.47
RACGAP1-223	ENST00000551260	FGF5	P12034	268 aa		5.85	□□□□□ -1.47
RACGAP1-223	ENST00000551260	CD19	P15391	556 aa		5.85	□□□□□ -1.47

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms