RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 PRAMEF33A0A0G2JMD5 474 aa13.32□□□□□ -0.28
GCN1-206ENST00000549815 A6NCN8 305 aa13.32□□□□□ -0.28
GCN1-206ENST00000549815 AGRPO00253 132 aa13.32□□□□□ -0.28
GCN1-206ENST00000549815 PRAMEF10O60809 474 aa13.32□□□□□ -0.28
GCN1-206ENST00000549815 KRT1P04264 644 aa13.32□□□□□ -0.28
GCN1-206ENST00000549815 ATP1A1P05023 1023 aaKnown RBP13.32□□□□□ -0.28
GCN1-206ENST00000549815 LIPCP11150 499 aa13.32□□□□□ -0.28
GCN1-206ENST00000549815 CSF2RBP32927 897 aa13.32□□□□□ -0.28
GCN1-206ENST00000549815 SLC1A1P43005 524 aa13.32□□□□□ -0.28
GCN1-206ENST00000549815 ARSDP51689 593 aa13.32□□□□□ -0.28
GCN1-206ENST00000549815 AP1B1Q10567 949 aa13.32□□□□□ -0.28
GCN1-206ENST00000549815 SRSF6Q13247 344 aaKnown RBP13.32□□□□□ -0.28
GCN1-206ENST00000549815 GALNT3Q14435 633 aa13.32□□□□□ -0.28
GCN1-206ENST00000549815 SLC14A2Q15849 920 aa13.32□□□□□ -0.28
GCN1-206ENST00000549815 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.32□□□□□ -0.28
GCN1-206ENST00000549815 PHF19Q5T6S3 580 aa13.32□□□□□ -0.28
GCN1-206ENST00000549815 NKAIN2Q5VXU1 208 aa13.32□□□□□ -0.28
GCN1-206ENST00000549815 KIAA1614Q5VZ46 1190 aa13.32□□□□□ -0.28
GCN1-206ENST00000549815 MFSD7Q6UXD7 560 aa13.32□□□□□ -0.28
GCN1-206ENST00000549815 CCDC81Q6ZN84 652 aa13.32□□□□□ -0.28
GCN1-206ENST00000549815 LYSMD3Q7Z3D4 306 aa13.32□□□□□ -0.28
GCN1-206ENST00000549815 DTX1Q86Y01 620 aa13.32□□□□□ -0.28
GCN1-206ENST00000549815 JAMLQ86YT9 394 aa13.32□□□□□ -0.28
GCN1-206ENST00000549815 RHOT1Q8IXI2 618 aa13.32□□□□□ -0.28
GCN1-206ENST00000549815 SFRP1Q8N474 314 aa13.32□□□□□ -0.28
GCN1-206ENST00000549815 RCBTB1Q8NDN9 531 aa13.32□□□□□ -0.28
GCN1-206ENST00000549815 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.32□□□□□ -0.28
GCN1-206ENST00000549815 SLC37A2Q8TED4 501 aa13.32□□□□□ -0.28
GCN1-206ENST00000549815 USP7Q93009 1102 aa13.32□□□□□ -0.28
GCN1-206ENST00000549815 RNF25Q96BH1 459 aaPredicted RBP13.32□□□□□ -0.28
GCN1-206ENST00000549815 CCNL2Q96S94 520 aaPredicted RBP13.32□□□□□ -0.28
GCN1-206ENST00000549815 SEMA4CQ9C0C4 833 aa13.32□□□□□ -0.28
GCN1-206ENST00000549815 B3GNT4Q9C0J1 378 aa13.32□□□□□ -0.28
GCN1-206ENST00000549815 BRD8Q9H0E9 1235 aa13.32□□□□□ -0.28
GCN1-206ENST00000549815 SLC25A51Q9H1U9 297 aa13.32□□□□□ -0.28
GCN1-206ENST00000549815 TSPY26PQ9H489 355 aa13.32□□□□□ -0.28
GCN1-206ENST00000549815 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.32□□□□□ -0.28
GCN1-206ENST00000549815 PKD2L2Q9NZM6 624 aa13.32□□□□□ -0.28
GCN1-206ENST00000549815 INTUQ9ULD6 942 aa13.32□□□□□ -0.28
GCN1-206ENST00000549815 HYOU1Q9Y4L1 999 aa13.32□□□□□ -0.28
GCN1-206ENST00000549815 ADGRG1Q9Y653 693 aa13.32□□□□□ -0.28
GCN1-206ENST00000549815 HGSO14964 777 aaPredicted RBP13.31□□□□□ -0.28
GCN1-206ENST00000549815 PPP1R12AO14974 1030 aaPredicted RBP13.31□□□□□ -0.28
GCN1-206ENST00000549815 ZW10O43264 779 aa13.31□□□□□ -0.28
GCN1-206ENST00000549815 ASMTLO95671 621 aa13.31□□□□□ -0.28
GCN1-206ENST00000549815 TPM1P09493 284 aa13.31□□□□□ -0.28
GCN1-206ENST00000549815 THRAP10827 490 aa13.31□□□□□ -0.28
GCN1-206ENST00000549815 CCL4P13236 92 aa13.31□□□□□ -0.28
GCN1-206ENST00000549815 ZFXP17010 805 aaPredicted RBP13.31□□□□□ -0.28
GCN1-206ENST00000549815 COMTP21964 271 aa13.31□□□□□ -0.28
GCN1-206ENST00000549815 NOP2P46087 812 aaKnown RBP13.31□□□□□ -0.28
GCN1-206ENST00000549815 LIMK2P53671 638 aa13.31□□□□□ -0.28
GCN1-206ENST00000549815 MAPK10P53779 464 aa13.31□□□□□ -0.28
GCN1-206ENST00000549815 PDK1Q15118 436 aa13.31□□□□□ -0.28
GCN1-206ENST00000549815 B4GALNT4Q76KP1 1039 aa13.31□□□□□ -0.28
GCN1-206ENST00000549815 TMC3Q7Z5M5 1100 aa13.31□□□□□ -0.28
GCN1-206ENST00000549815 NT5DC3Q86UY8 548 aa13.31□□□□□ -0.28
GCN1-206ENST00000549815 RFX6Q8HWS3 928 aa13.31□□□□□ -0.28
GCN1-206ENST00000549815 RNF214Q8ND24 703 aa13.31□□□□□ -0.28
GCN1-206ENST00000549815 GPR26Q8NDV2 337 aa13.31□□□□□ -0.28
GCN1-206ENST00000549815 OR4D9Q8NGE8 314 aa13.31□□□□□ -0.28
GCN1-206ENST00000549815 CCHCR1Q8TD31 782 aa13.31□□□□□ -0.28
GCN1-206ENST00000549815 CCDC74BQ96LY2 380 aa13.31□□□□□ -0.28
GCN1-206ENST00000549815 AGAP3Q96P47 875 aa13.31□□□□□ -0.28
GCN1-206ENST00000549815 MAK16Q9BXY0 300 aaKnown RBP13.31□□□□□ -0.28
GCN1-206ENST00000549815 ADGRE3Q9BY15 652 aa13.31□□□□□ -0.28
GCN1-206ENST00000549815 RMI1Q9H9A7 625 aa13.31□□□□□ -0.28
GCN1-206ENST00000549815 ZFYVE1Q9HBF4 777 aa13.31□□□□□ -0.28
GCN1-206ENST00000549815 DDX56Q9NY93 547 aaKnown RBP13.31□□□□□ -0.28
GCN1-206ENST00000549815 TMEM9Q9P0T7 183 aa13.31□□□□□ -0.28
GCN1-206ENST00000549815 PDP2Q9P2J9 529 aa13.31□□□□□ -0.28
GCN1-206ENST00000549815 NFKBIL1Q9UBC1 381 aaPredicted RBP13.31□□□□□ -0.28
GCN1-206ENST00000549815 TBC1D29Q9UFV1 150 aa13.31□□□□□ -0.28
GCN1-206ENST00000549815 PRKAB1Q9Y478 270 aa13.31□□□□□ -0.28
GCN1-206ENST00000549815 SDK2Q58EX2 2172 aa13.31□□□□□ -0.28
GCN1-206ENST00000549815 ZNF462Q96JM2 2506 aa13.31□□□□□ -0.28
GCN1-206ENST00000549815 COL6A6A6NMZ7 2263 aa13.3□□□□□ -0.28
GCN1-206ENST00000549815 TRBV23OR9-2A0A075B6M9 112 aa13.3□□□□□ -0.28
GCN1-206ENST00000549815 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.3□□□□□ -0.28
GCN1-206ENST00000549815 AKR1B15C9JRZ8 316 aaPredicted RBP13.3□□□□□ -0.28
GCN1-206ENST00000549815 NUAK1O60285 661 aa13.3□□□□□ -0.28
GCN1-206ENST00000549815 MT-CYBP00156 380 aaPredicted RBP13.3□□□□□ -0.28
GCN1-206ENST00000549815 FGF3P11487 239 aaPredicted RBP13.3□□□□□ -0.28
GCN1-206ENST00000549815 PTPN3P26045 913 aa13.3□□□□□ -0.28
GCN1-206ENST00000549815 CDKN2BP42772 138 aa13.3□□□□□ -0.28
GCN1-206ENST00000549815 HADHBP55084 474 aaKnown RBP13.3□□□□□ -0.28
GCN1-206ENST00000549815 DCDC1P59894 354 aa13.3□□□□□ -0.28
GCN1-206ENST00000549815 DYNLT1P63172 113 aa13.3□□□□□ -0.28
GCN1-206ENST00000549815 CDK18Q07002 472 aa13.3□□□□□ -0.28
GCN1-206ENST00000549815 ADCY2Q08462 1091 aa13.3□□□□□ -0.28
GCN1-206ENST00000549815 TRA2AQ13595 282 aaKnown RBP eCLIP13.3□□□□□ -0.28
GCN1-206ENST00000549815 PRKD1Q15139 912 aaPredicted RBP13.3□□□□□ -0.28
GCN1-206ENST00000549815 TEX44Q53QW1 395 aa13.3□□□□□ -0.28
GCN1-206ENST00000549815 TAF1BQ53T94 588 aaPredicted RBP13.3□□□□□ -0.28
GCN1-206ENST00000549815 IYDQ6PHW0 289 aa13.3□□□□□ -0.28
GCN1-206ENST00000549815 CHST15Q7LFX5 561 aaPredicted RBP13.3□□□□□ -0.28
GCN1-206ENST00000549815 ZFAND4Q86XD8 727 aa13.3□□□□□ -0.28
GCN1-206ENST00000549815 CNGA4Q8IV77 575 aa13.3□□□□□ -0.28
GCN1-206ENST00000549815 SPATA22Q8NHS9 363 aa13.3□□□□□ -0.28
GCN1-206ENST00000549815 PMEPA1Q969W9 287 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms