RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 LAMP2P13473 410 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 ZFP36P26651 326 aaKnown RBP3.88□□□□□ -1.79
APAF1-208ENST00000549007 ADSSP30520 456 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 PRCPP42785 496 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 ACOT2P49753 483 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 RGS19P49795 217 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 WDR5P61964 334 aaKnown RBP3.88□□□□□ -1.79
APAF1-208ENST00000549007 PPIGQ13427 754 aaKnown RBP eCLIP3.88□□□□□ -1.79
APAF1-208ENST00000549007 FZD5Q13467 585 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 CCDC183Q5T5S1 534 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 LAIR1Q6GTX8 287 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 CYP20A1Q6UW02 462 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 KYAT3Q6YP21 454 aaKnown RBP3.88□□□□□ -1.79
APAF1-208ENST00000549007 C11orf57Q6ZUT1 292 aaPredicted RBP3.88□□□□□ -1.79
APAF1-208ENST00000549007 TMPRSS6Q8IU80 811 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 TAGAPQ8N103 731 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 ADSSL1Q8N142 457 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 GABPB2Q8TAK5 448 aaPredicted RBP3.88□□□□□ -1.79
APAF1-208ENST00000549007 CTHRC1Q96CG8 243 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 SEZ6LQ9BYH1 1024 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 NUF2Q9BZD4 464 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 CDT1Q9H211 546 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 NDST4Q9H3R1 872 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 FZD8Q9H461 694 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 AGPAT5Q9NUQ2 364 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 PRMT7Q9NVM4 692 aaPredicted RBP3.88□□□□□ -1.79
APAF1-208ENST00000549007 MTUS1Q9ULD2 1270 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 TTLL3Q9Y4R7 772 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 NOX1Q9Y5S8 564 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 PHLPP2Q6ZVD8 1323 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 CNTNAP2Q9UHC6 1331 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 PVALEFA0A1B0GWK0 134 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 APOA4P06727 396 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 ALDOCP09972 364 aaKnown RBP3.87□□□□□ -1.79
APAF1-208ENST00000549007 ATF7P17544 494 aaPredicted RBP3.87□□□□□ -1.79
APAF1-208ENST00000549007 GKP32189 559 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 TTKP33981 857 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 HNF1BP35680 557 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 EIF2DP41214 584 aaKnown RBP3.87□□□□□ -1.79
APAF1-208ENST00000549007 VAV2P52735 878 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 SLC37A1P57057 533 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 GTF2BQ00403 316 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 HHEXQ03014 270 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 TBL3Q12788 808 aaKnown RBP3.87□□□□□ -1.79
APAF1-208ENST00000549007 TP53BP2Q13625 1128 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 RUNX2Q13950 521 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 IRF3Q14653 427 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 KLHL40Q2TBA0 621 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 FAM133BQ5BKY9 247 aaKnown RBP3.87□□□□□ -1.79
APAF1-208ENST00000549007 DCAF17Q5H9S7 520 aaPredicted RBP3.87□□□□□ -1.79
APAF1-208ENST00000549007 GPR149Q86SP6 731 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 ADGRF3Q8IZF5 1079 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 GPR78Q96P69 363 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 PPP1R10Q96QC0 940 aaKnown RBP3.87□□□□□ -1.79
APAF1-208ENST00000549007 ACCSQ96QU6 501 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 TIPINQ9BVW5 301 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 TXLNGYQ9BZA5 131 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 TRIM6Q9C030 488 aaPredicted RBP3.87□□□□□ -1.79
APAF1-208ENST00000549007 C2orf40Q9H1Z8 148 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 SCPEP1Q9HB40 452 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 PDE7BQ9NP56 450 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 OLFML3Q9NRN5 406 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 MGAT4CQ9UBM8 478 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 HSPB7Q9UBY9 170 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 LIMA1Q9UHB6 759 aaKnown RBP3.87□□□□□ -1.79
APAF1-208ENST00000549007 CDH23Q9H251 3354 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 NPEPPSL1A6NEC2 478 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 DIAPH2O60879 1101 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 USP12O75317 370 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 TMIGD3P0DMS9 266 aaPredicted RBP3.87□□□□□ -1.79
APAF1-208ENST00000549007 CXCL8P10145 99 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 ZNF37AP17032 561 aaPredicted RBP3.87□□□□□ -1.79
APAF1-208ENST00000549007 CASP4P49662 377 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 DIO1P49895 249 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 ZNF766Q5HY98 468 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 HIST2H2BCQ6DN03 193 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 HIST2H2BDQ6DRA6 164 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 SFRP4Q6FHJ7 346 aaPredicted RBP3.87□□□□□ -1.79
APAF1-208ENST00000549007 DENND1BQ6P3S1 775 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 NOTUMQ6P988 496 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 KRT77Q7Z794 578 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 SNX32Q86XE0 403 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 CREBRFQ8IUR6 639 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 POMGNT1Q8WZA1 660 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 CNOT9Q92600 299 aaKnown RBP3.87□□□□□ -1.79
APAF1-208ENST00000549007 CCDC47Q96A33 483 aaKnown RBP3.87□□□□□ -1.79
APAF1-208ENST00000549007 CCDC34Q96HJ3 373 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 DCLRE1CQ96SD1 692 aaKnown RBP3.87□□□□□ -1.79
APAF1-208ENST00000549007 FAM213AQ9BRX8 229 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 NTPCRQ9BSD7 190 aaKnown RBP3.87□□□□□ -1.79
APAF1-208ENST00000549007 MSTO1Q9BUK6 570 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 STRA6Q9BX79 667 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 KLHL4Q9C0H6 718 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 CDCP1Q9H5V8 836 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 BEX4Q9NWD9 120 aaPredicted RBP3.87□□□□□ -1.79
APAF1-208ENST00000549007 TBC1D14Q9P2M4 693 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 SEL1LQ9UBV2 794 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 HOOK1Q9UJC3 728 aaKnown RBP3.87□□□□□ -1.79
APAF1-208ENST00000549007 SLC25A13Q9UJS0 675 aa3.87□□□□□ -1.79
APAF1-208ENST00000549007 A0A1B0GUA9 196 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms