RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 PLEKHH3Q7Z736 793 aa13.68□□□□□ -0.22
HDAC7-228ENST00000548938 PTRH1Q86Y79 214 aaKnown RBP13.68□□□□□ -0.22
HDAC7-228ENST00000548938 CILP2Q8IUL8 1156 aa13.68□□□□□ -0.22
HDAC7-228ENST00000548938 PAPD5Q8NDF8 572 aaKnown RBP13.68□□□□□ -0.22
HDAC7-228ENST00000548938 OR13J1Q8NGT2 312 aa13.68□□□□□ -0.22
HDAC7-228ENST00000548938 SLC39A8Q9C0K1 460 aa13.68□□□□□ -0.22
HDAC7-228ENST00000548938 MARCH4Q9P2E8 410 aaPredicted RBP13.68□□□□□ -0.22
HDAC7-228ENST00000548938 ZNF639Q9UID6 485 aa13.68□□□□□ -0.22
HDAC7-228ENST00000548938 PIN4Q9Y237 131 aaKnown RBP13.68□□□□□ -0.22
HDAC7-228ENST00000548938 PDCD11Q14690 1871 aaKnown RBP13.67□□□□□ -0.22
HDAC7-228ENST00000548938 MYBPHLA2RUH7 354 aa13.67□□□□□ -0.22
HDAC7-228ENST00000548938 OR51F1A6NGY5 319 aa13.67□□□□□ -0.22
HDAC7-228ENST00000548938 UBXN8O00124 270 aa13.67□□□□□ -0.22
HDAC7-228ENST00000548938 MATN3O15232 486 aa13.67□□□□□ -0.22
HDAC7-228ENST00000548938 RSL1D1O76021 490 aaKnown RBP13.67□□□□□ -0.22
HDAC7-228ENST00000548938 F9P00740 461 aa13.67□□□□□ -0.22
HDAC7-228ENST00000548938 LBPP18428 481 aa13.67□□□□□ -0.22
HDAC7-228ENST00000548938 IDUAP35475 653 aa13.67□□□□□ -0.22
HDAC7-228ENST00000548938 CASP2P42575 452 aa13.67□□□□□ -0.22
HDAC7-228ENST00000548938 NFKB2Q00653 900 aa13.67□□□□□ -0.22
HDAC7-228ENST00000548938 FOXM1Q08050 763 aa13.67□□□□□ -0.22
HDAC7-228ENST00000548938 PAGE3Q5JUK9 113 aa13.67□□□□□ -0.22
HDAC7-228ENST00000548938 BROXQ5VW32 411 aa13.67□□□□□ -0.22
HDAC7-228ENST00000548938 KANK2Q63ZY3 851 aa13.67□□□□□ -0.22
HDAC7-228ENST00000548938 SFRP1Q8N474 314 aa13.67□□□□□ -0.22
HDAC7-228ENST00000548938 PDPRQ8NCN5 879 aa13.67□□□□□ -0.22
HDAC7-228ENST00000548938 CALML6Q8TD86 181 aa13.67□□□□□ -0.22
HDAC7-228ENST00000548938 RAB2BQ8WUD1 216 aa13.67□□□□□ -0.22
HDAC7-228ENST00000548938 CHID1Q9BWS9 393 aa13.67□□□□□ -0.22
HDAC7-228ENST00000548938 TDRD1Q9BXT4 1180 aaKnown RBP13.67□□□□□ -0.22
HDAC7-228ENST00000548938 SLAMF8Q9P0V8 285 aa13.67□□□□□ -0.22
HDAC7-228ENST00000548938 CPA4Q9UI42 421 aa13.67□□□□□ -0.22
HDAC7-228ENST00000548938 PSME2Q9UL46 239 aa13.67□□□□□ -0.22
HDAC7-228ENST00000548938 CRYL1Q9Y2S2 319 aa13.67□□□□□ -0.22
HDAC7-228ENST00000548938 TRIM17Q9Y577 477 aa13.67□□□□□ -0.22
HDAC7-228ENST00000548938 GPR32O75388 356 aa13.67□□□□□ -0.22
HDAC7-228ENST00000548938 JUNBP17275 347 aaPredicted RBP13.67□□□□□ -0.22
HDAC7-228ENST00000548938 NR4A1P22736 598 aa13.67□□□□□ -0.22
HDAC7-228ENST00000548938 HRH2P25021 359 aa13.67□□□□□ -0.22
HDAC7-228ENST00000548938 OPRL1P41146 370 aa13.67□□□□□ -0.22
HDAC7-228ENST00000548938 ARSDP51689 593 aa13.67□□□□□ -0.22
HDAC7-228ENST00000548938 ZNF135P52742 658 aaPredicted RBP13.67□□□□□ -0.22
HDAC7-228ENST00000548938 ECT2LQ008S8 904 aa13.67□□□□□ -0.22
HDAC7-228ENST00000548938 PFKFB4Q16877 469 aa13.67□□□□□ -0.22
HDAC7-228ENST00000548938 KIAA2013Q8IYS2 634 aa13.67□□□□□ -0.22
HDAC7-228ENST00000548938 ARRDC4Q8NCT1 418 aa13.67□□□□□ -0.22
HDAC7-228ENST00000548938 OR6P1Q8NGX9 317 aa13.67□□□□□ -0.22
HDAC7-228ENST00000548938 NPLOC4Q8TAT6 608 aa13.67□□□□□ -0.22
HDAC7-228ENST00000548938 OSCP1Q8WVF1 389 aa13.67□□□□□ -0.22
HDAC7-228ENST00000548938 BIRC7Q96CA5 298 aa13.67□□□□□ -0.22
HDAC7-228ENST00000548938 PCED1BQ96HM7 432 aa13.67□□□□□ -0.22
HDAC7-228ENST00000548938 RNF145Q96MT1 663 aa13.67□□□□□ -0.22
HDAC7-228ENST00000548938 BEGAINQ9BUH8 593 aa13.67□□□□□ -0.22
HDAC7-228ENST00000548938 ING2Q9H160 280 aa13.67□□□□□ -0.22
HDAC7-228ENST00000548938 TIMM13Q9Y5L4 95 aaPredicted RBP13.67□□□□□ -0.22
HDAC7-228ENST00000548938 MAGED1Q9Y5V3 778 aaPredicted RBP13.67□□□□□ -0.22
HDAC7-228ENST00000548938 DGKBQ9Y6T7 804 aa13.67□□□□□ -0.22
HDAC7-228ENST00000548938 H0YAE9 185 aa13.66□□□□□ -0.22
HDAC7-228ENST00000548938 KCNE1P15382 129 aa13.66□□□□□ -0.22
HDAC7-228ENST00000548938 IL7RP16871 459 aa13.66□□□□□ -0.22
HDAC7-228ENST00000548938 POLD3Q15054 466 aaPredicted RBP13.66□□□□□ -0.22
HDAC7-228ENST00000548938 TRIM16LQ309B1 348 aa13.66□□□□□ -0.22
HDAC7-228ENST00000548938 RAB41Q5JT25 222 aa13.66□□□□□ -0.22
HDAC7-228ENST00000548938 EMID1Q96A84 441 aaPredicted RBP13.66□□□□□ -0.22
HDAC7-228ENST00000548938 TAMM41Q96BW9 452 aa13.66□□□□□ -0.22
HDAC7-228ENST00000548938 TINF2Q9BSI4 451 aa13.66□□□□□ -0.22
HDAC7-228ENST00000548938 RAD21L1Q9H4I0 556 aa13.66□□□□□ -0.22
HDAC7-228ENST00000548938 GPN2Q9H9Y4 310 aaPredicted RBP13.66□□□□□ -0.22
HDAC7-228ENST00000548938 B3GNT3Q9Y2A9 372 aa13.66□□□□□ -0.22
HDAC7-228ENST00000548938 PCDHGA11Q9Y5H2 935 aa13.66□□□□□ -0.22
HDAC7-228ENST00000548938 A0A1W2PP18 115 aa13.66□□□□□ -0.22
HDAC7-228ENST00000548938 GABRDO14764 452 aa13.66□□□□□ -0.22
HDAC7-228ENST00000548938 FGF4P08620 206 aa13.66□□□□□ -0.22
HDAC7-228ENST00000548938 TCF3P15923 654 aa13.66□□□□□ -0.22
HDAC7-228ENST00000548938 JAK1P23458 1154 aa13.66□□□□□ -0.22
HDAC7-228ENST00000548938 EIF2B2P49770 351 aaKnown RBP13.66□□□□□ -0.22
HDAC7-228ENST00000548938 PLA2G16P53816 162 aa13.66□□□□□ -0.22
HDAC7-228ENST00000548938 AQP6Q13520 282 aa13.66□□□□□ -0.22
HDAC7-228ENST00000548938 SPCS2Q15005 226 aa13.66□□□□□ -0.22
HDAC7-228ENST00000548938 OR4D1Q15615 310 aa13.66□□□□□ -0.22
HDAC7-228ENST00000548938 FBXO48Q5FWF7 155 aa13.66□□□□□ -0.22
HDAC7-228ENST00000548938 COQ5Q5HYK3 327 aa13.66□□□□□ -0.22
HDAC7-228ENST00000548938 GTF2IRD2BQ6EKJ0 949 aa13.66□□□□□ -0.22
HDAC7-228ENST00000548938 GTF2IRD2Q86UP8 949 aa13.66□□□□□ -0.22
HDAC7-228ENST00000548938 TMCO5AQ8N6Q1 288 aa13.66□□□□□ -0.22
HDAC7-228ENST00000548938 NAT16Q8N8M0 369 aa13.66□□□□□ -0.22
HDAC7-228ENST00000548938 ADNPQ9H2P0 1102 aa13.66□□□□□ -0.22
HDAC7-228ENST00000548938 MUC13Q9H3R2 512 aa13.66□□□□□ -0.22
HDAC7-228ENST00000548938 NTN4Q9HB63 628 aa13.66□□□□□ -0.22
HDAC7-228ENST00000548938 LTB4R2Q9NPC1 389 aa13.66□□□□□ -0.22
HDAC7-228ENST00000548938 RGS18Q9NS28 235 aa13.66□□□□□ -0.22
HDAC7-228ENST00000548938 INTS7Q9NVH2 962 aaKnown RBP13.66□□□□□ -0.22
HDAC7-228ENST00000548938 SLC27A5Q9Y2P5 690 aa13.66□□□□□ -0.22
HDAC7-228ENST00000548938 GPR45Q9Y5Y3 372 aa13.66□□□□□ -0.22
HDAC7-228ENST00000548938 KRBA1A5PL33 1030 aa13.65□□□□□ -0.22
HDAC7-228ENST00000548938 HHLA1C9JL84 531 aa13.65□□□□□ -0.22
HDAC7-228ENST00000548938 ABCB7O75027 752 aa13.65□□□□□ -0.22
HDAC7-228ENST00000548938 CAPN15O75808 1086 aa13.65□□□□□ -0.22
HDAC7-228ENST00000548938 S1PR4O95977 384 aa13.65□□□□□ -0.22
HDAC7-228ENST00000548938 CD1DP15813 335 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms