RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 CLTBP09497 229 aa4.15□□□□□ -1.75
PTCH1-216ENST00000548379 SELLP14151 372 aa4.15□□□□□ -1.75
PTCH1-216ENST00000548379 AKR1B1P15121 316 aa4.15□□□□□ -1.75
PTCH1-216ENST00000548379 DDX5P17844 614 aaKnown RBP4.15□□□□□ -1.75
PTCH1-216ENST00000548379 HNRNPH1P31943 449 aaKnown RBP4.15□□□□□ -1.75
PTCH1-216ENST00000548379 PIGAP37287 484 aa4.15□□□□□ -1.75
PTCH1-216ENST00000548379 NR4A2P43354 598 aa4.15□□□□□ -1.75
PTCH1-216ENST00000548379 CAMPP49913 170 aa4.15□□□□□ -1.75
PTCH1-216ENST00000548379 METAP2P50579 478 aaKnown RBP eCLIP4.15□□□□□ -1.75
PTCH1-216ENST00000548379 PMS2P54278 862 aa4.15□□□□□ -1.75
PTCH1-216ENST00000548379 IFI35P80217 286 aaPredicted RBP4.15□□□□□ -1.75
PTCH1-216ENST00000548379 TFAP4Q01664 338 aa4.15□□□□□ -1.75
PTCH1-216ENST00000548379 NUCB1Q02818 461 aa4.15□□□□□ -1.75
PTCH1-216ENST00000548379 STK4Q13043 487 aa4.15□□□□□ -1.75
PTCH1-216ENST00000548379 GPS2Q13227 327 aa4.15□□□□□ -1.75
PTCH1-216ENST00000548379 PCLAFQ15004 111 aa4.15□□□□□ -1.75
PTCH1-216ENST00000548379 PRTGQ2VWP7 1150 aa4.15□□□□□ -1.75
PTCH1-216ENST00000548379 MMEL1Q495T6 779 aa4.15□□□□□ -1.75
PTCH1-216ENST00000548379 PPP6R3Q5H9R7 873 aaPredicted RBP4.15□□□□□ -1.75
PTCH1-216ENST00000548379 CCDC13Q8IYE1 715 aa4.15□□□□□ -1.75
PTCH1-216ENST00000548379 SPATA6LQ8N4H0 392 aa4.15□□□□□ -1.75
PTCH1-216ENST00000548379 OR14L1PQ8NHC6 308 aa4.15□□□□□ -1.75
PTCH1-216ENST00000548379 TRPC4APQ8TEL6 797 aa4.15□□□□□ -1.75
PTCH1-216ENST00000548379 ELMOD3Q96FG2 381 aa4.15□□□□□ -1.75
PTCH1-216ENST00000548379 HAUS8Q9BT25 410 aa4.15□□□□□ -1.75
PTCH1-216ENST00000548379 CENPOQ9BU64 300 aa4.15□□□□□ -1.75
PTCH1-216ENST00000548379 MXD3Q9BW11 206 aa4.15□□□□□ -1.75
PTCH1-216ENST00000548379 SPRY4Q9C004 299 aa4.15□□□□□ -1.75
PTCH1-216ENST00000548379 FOXP1Q9H334 677 aaPredicted RBP4.15□□□□□ -1.75
PTCH1-216ENST00000548379 MMP25Q9NPA2 562 aa4.15□□□□□ -1.75
PTCH1-216ENST00000548379 HINT3Q9NQE9 182 aaKnown RBP4.15□□□□□ -1.75
PTCH1-216ENST00000548379 POT1Q9NUX5 634 aa4.15□□□□□ -1.75
PTCH1-216ENST00000548379 ELOVL5Q9NYP7 299 aa4.15□□□□□ -1.75
PTCH1-216ENST00000548379 OR6C3Q9NZP0 311 aa4.15□□□□□ -1.75
PTCH1-216ENST00000548379 OGFRQ9NZT2 677 aa4.15□□□□□ -1.75
PTCH1-216ENST00000548379 TMEM5Q9Y2B1 443 aa4.15□□□□□ -1.75
PTCH1-216ENST00000548379 SHPRHQ149N8 1683 aa4.15□□□□□ -1.75
PTCH1-216ENST00000548379 SETD1AO15047 1707 aaKnown RBP4.15□□□□□ -1.75
PTCH1-216ENST00000548379 TMEM131LA2VDJ0 1609 aa4.14□□□□□ -1.75
PTCH1-216ENST00000548379 BCL9LQ86UU0 1499 aa4.14□□□□□ -1.75
PTCH1-216ENST00000548379 A0A1B0GVM2 712 aa4.14□□□□□ -1.75
PTCH1-216ENST00000548379 A0A1W2PR77 199 aa4.14□□□□□ -1.75
PTCH1-216ENST00000548379 KDM4EB2RXH2 506 aaPredicted RBP4.14□□□□□ -1.75
PTCH1-216ENST00000548379 VWA5AO00534 786 aa4.14□□□□□ -1.75
PTCH1-216ENST00000548379 TIMM23O14925 209 aa4.14□□□□□ -1.75
PTCH1-216ENST00000548379 PAPSS1O43252 624 aaPredicted RBP4.14□□□□□ -1.75
PTCH1-216ENST00000548379 HSPA12AO43301 675 aa4.14□□□□□ -1.75
PTCH1-216ENST00000548379 HS6ST1O60243 411 aa4.14□□□□□ -1.75
PTCH1-216ENST00000548379 PLOD3O60568 738 aa4.14□□□□□ -1.75
PTCH1-216ENST00000548379 ENTPD3O75355 529 aa4.14□□□□□ -1.75
PTCH1-216ENST00000548379 BEST1O76090 585 aa4.14□□□□□ -1.75
PTCH1-216ENST00000548379 VNN2O95498 520 aa4.14□□□□□ -1.75
PTCH1-216ENST00000548379 STARD3NLO95772 234 aa4.14□□□□□ -1.75
PTCH1-216ENST00000548379 CYP1A2P05177 515 aa4.14□□□□□ -1.75
PTCH1-216ENST00000548379 TUBBP07437 444 aa4.14□□□□□ -1.75
PTCH1-216ENST00000548379 PSG1P11464 419 aa4.14□□□□□ -1.75
PTCH1-216ENST00000548379 NAGAP17050 411 aa4.14□□□□□ -1.75
PTCH1-216ENST00000548379 TMEM11P17152 192 aa4.14□□□□□ -1.75
PTCH1-216ENST00000548379 PON1P27169 355 aa4.14□□□□□ -1.75
PTCH1-216ENST00000548379 GCH1P30793 250 aa4.14□□□□□ -1.75
PTCH1-216ENST00000548379 HOXC9P31274 260 aa4.14□□□□□ -1.75
PTCH1-216ENST00000548379 TAS2R40P59535 323 aa4.14□□□□□ -1.75
PTCH1-216ENST00000548379 PSMC6P62333 389 aa4.14□□□□□ -1.75
PTCH1-216ENST00000548379 MRPS34P82930 218 aaKnown RBP4.14□□□□□ -1.75
PTCH1-216ENST00000548379 ROR2Q01974 943 aaKnown RBP4.14□□□□□ -1.75
PTCH1-216ENST00000548379 ACSM2AQ08AH3 577 aa4.14□□□□□ -1.75
PTCH1-216ENST00000548379 NEDD9Q14511 834 aa4.14□□□□□ -1.75
PTCH1-216ENST00000548379 EFNB3Q15768 340 aa4.14□□□□□ -1.75
PTCH1-216ENST00000548379 DNTTIP2Q5QJE6 756 aaKnown RBP4.14□□□□□ -1.75
PTCH1-216ENST00000548379 LRIF1Q5T3J3 769 aa4.14□□□□□ -1.75
PTCH1-216ENST00000548379 ACSM2BQ68CK6 577 aa4.14□□□□□ -1.75
PTCH1-216ENST00000548379 ZNF425Q6IV72 752 aa4.14□□□□□ -1.75
PTCH1-216ENST00000548379 METTL2BQ6P1Q9 378 aaKnown RBP4.14□□□□□ -1.75
PTCH1-216ENST00000548379 COLCA1Q6ZS62 124 aa4.14□□□□□ -1.75
PTCH1-216ENST00000548379 Q6ZTK2 550 aa4.14□□□□□ -1.75
PTCH1-216ENST00000548379 SHFQ7M4L6 423 aa4.14□□□□□ -1.75
PTCH1-216ENST00000548379 ZNF575Q86XF7 245 aa4.14□□□□□ -1.75
PTCH1-216ENST00000548379 PALB2Q86YC2 1186 aa4.14□□□□□ -1.75
PTCH1-216ENST00000548379 ZKSCAN4Q969J2 545 aaPredicted RBP4.14□□□□□ -1.75
PTCH1-216ENST00000548379 METTL2AQ96IZ6 378 aaKnown RBP4.14□□□□□ -1.75
PTCH1-216ENST00000548379 EGLN2Q96KS0 407 aa4.14□□□□□ -1.75
PTCH1-216ENST00000548379 SH3GL2Q99962 352 aa4.14□□□□□ -1.75
PTCH1-216ENST00000548379 NCAPGQ9BPX3 1015 aa4.14□□□□□ -1.75
PTCH1-216ENST00000548379 SRSF8Q9BRL6 282 aaKnown RBP4.14□□□□□ -1.75
PTCH1-216ENST00000548379 MAK16Q9BXY0 300 aaKnown RBP4.14□□□□□ -1.75
PTCH1-216ENST00000548379 PDE7BQ9NP56 450 aa4.14□□□□□ -1.75
PTCH1-216ENST00000548379 MTMR10Q9NXD2 777 aa4.14□□□□□ -1.75
PTCH1-216ENST00000548379 CWC15Q9P013 229 aaKnown RBP4.14□□□□□ -1.75
PTCH1-216ENST00000548379 SEC63Q9UGP8 760 aaKnown RBP4.14□□□□□ -1.75
PTCH1-216ENST00000548379 NENFQ9UMX5 172 aa4.14□□□□□ -1.75
PTCH1-216ENST00000548379 SETBP1Q9Y6X0 1596 aa4.14□□□□□ -1.75
PTCH1-216ENST00000548379 ARHGEF10O15013 1369 aa4.14□□□□□ -1.75
PTCH1-216ENST00000548379 CCDC144AA2RUR9 1427 aa4.13□□□□□ -1.75
PTCH1-216ENST00000548379 MYOM2P54296 1465 aa4.13□□□□□ -1.75
PTCH1-216ENST00000548379 RALGAPBQ86X10 1494 aa4.13□□□□□ -1.75
PTCH1-216ENST00000548379 RPS10-NUDT3A0A1W2PQS6 291 aa4.13□□□□□ -1.75
PTCH1-216ENST00000548379 OR2A25A4D2G3 310 aa4.13□□□□□ -1.75
PTCH1-216ENST00000548379 CLEC18AA5D8T8 446 aa4.13□□□□□ -1.75
PTCH1-216ENST00000548379 B4DLN1 442 aa4.13□□□□□ -1.75
PTCH1-216ENST00000548379 INAFM1C9JVW0 142 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms