RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 GLRX5Q86SX6 157 aa14.36□□□□□ -0.11
DDX54-203ENST00000546869 GATAD2AQ86YP4 633 aa14.36□□□□□ -0.11
DDX54-203ENST00000546869 ZNF548Q8NEK5 533 aaPredicted RBP14.36□□□□□ -0.11
DDX54-203ENST00000546869 SPATA4Q8NEY3 305 aa14.36□□□□□ -0.11
DDX54-203ENST00000546869 RHBDD1Q8TEB9 315 aa14.36□□□□□ -0.11
DDX54-203ENST00000546869 OR1E3Q8WZA6 343 aa14.36□□□□□ -0.11
DDX54-203ENST00000546869 CPT1BQ92523 772 aa14.36□□□□□ -0.11
DDX54-203ENST00000546869 TSACCQ96A04 125 aaPredicted RBP14.36□□□□□ -0.11
DDX54-203ENST00000546869 TUBB2BQ9BVA1 445 aa14.36□□□□□ -0.11
DDX54-203ENST00000546869 DUSP23Q9BVJ7 150 aa14.36□□□□□ -0.11
DDX54-203ENST00000546869 IL22Q9GZX6 179 aa14.36□□□□□ -0.11
DDX54-203ENST00000546869 NLGN3Q9NZ94 848 aa14.36□□□□□ -0.11
DDX54-203ENST00000546869 BFARQ9NZS9 450 aa14.36□□□□□ -0.11
DDX54-203ENST00000546869 CDC23Q9UJX2 597 aa14.36□□□□□ -0.11
DDX54-203ENST00000546869 KCTD3Q9Y597 815 aa14.36□□□□□ -0.11
DDX54-203ENST00000546869 LMO7DNF2Z398 122 aa14.35□□□□□ -0.11
DDX54-203ENST00000546869 SMAPO00193 183 aa14.35□□□□□ -0.11
DDX54-203ENST00000546869 SLC25A14O95258 325 aaPredicted RBP14.35□□□□□ -0.11
DDX54-203ENST00000546869 KCNK5O95279 499 aa14.35□□□□□ -0.11
DDX54-203ENST00000546869 IVDP26440 423 aa14.35□□□□□ -0.11
DDX54-203ENST00000546869 IL9RQ01113 521 aa14.35□□□□□ -0.11
DDX54-203ENST00000546869 DR1Q01658 176 aa14.35□□□□□ -0.11
DDX54-203ENST00000546869 ACVR1Q04771 509 aa14.35□□□□□ -0.11
DDX54-203ENST00000546869 POU6F1Q14863 301 aa14.35□□□□□ -0.11
DDX54-203ENST00000546869 PPP1R7Q15435 360 aa14.35□□□□□ -0.11
DDX54-203ENST00000546869 GPR33Q49SQ1 333 aa14.35□□□□□ -0.11
DDX54-203ENST00000546869 ATP13A5Q4VNC0 1218 aa14.35□□□□□ -0.11
DDX54-203ENST00000546869 PCID2Q5JVF3 399 aa14.35□□□□□ -0.11
DDX54-203ENST00000546869 CERCAMQ5T4B2 595 aa14.35□□□□□ -0.11
DDX54-203ENST00000546869 ALS2CLQ60I27 953 aa14.35□□□□□ -0.11
DDX54-203ENST00000546869 ZNF534Q76KX8 674 aa14.35□□□□□ -0.11
DDX54-203ENST00000546869 PHYKPLQ8IUZ5 450 aa14.35□□□□□ -0.11
DDX54-203ENST00000546869 HID1Q8IV36 788 aa14.35□□□□□ -0.11
DDX54-203ENST00000546869 FAM181AQ8N9Y4 354 aa14.35□□□□□ -0.11
DDX54-203ENST00000546869 OR13C4Q8NGS5 318 aa14.35□□□□□ -0.11
DDX54-203ENST00000546869 OR4C6Q8NH72 309 aa14.35□□□□□ -0.11
DDX54-203ENST00000546869 ZNF398Q8TD17 642 aa14.35□□□□□ -0.11
DDX54-203ENST00000546869 SETD7Q8WTS6 366 aaKnown RBP14.35□□□□□ -0.11
DDX54-203ENST00000546869 PTCD2Q8WV60 388 aaKnown RBP14.35□□□□□ -0.11
DDX54-203ENST00000546869 SGSM3Q96HU1 749 aa14.35□□□□□ -0.11
DDX54-203ENST00000546869 LRRC61Q9BV99 259 aa14.35□□□□□ -0.11
DDX54-203ENST00000546869 TCEAL2Q9H3H9 227 aaPredicted RBP14.35□□□□□ -0.11
DDX54-203ENST00000546869 UCKL1Q9NWZ5 548 aa14.35□□□□□ -0.11
DDX54-203ENST00000546869 TMPRSS11EQ9UL52 423 aa14.35□□□□□ -0.11
DDX54-203ENST00000546869 TCRBV7S3A2A0A539 114 aa14.34□□□□□ -0.11
DDX54-203ENST00000546869 CHUKO15111 745 aa14.34□□□□□ -0.11
DDX54-203ENST00000546869 INPP4BO15327 924 aa14.34□□□□□ -0.11
DDX54-203ENST00000546869 BUD23O43709 281 aaKnown RBP14.34□□□□□ -0.11
DDX54-203ENST00000546869 VEGFDO43915 354 aa14.34□□□□□ -0.11
DDX54-203ENST00000546869 NUAK1O60285 661 aa14.34□□□□□ -0.11
DDX54-203ENST00000546869 SDC3O75056 442 aa14.34□□□□□ -0.11
DDX54-203ENST00000546869 DNAJC6O75061 913 aa14.34□□□□□ -0.11
DDX54-203ENST00000546869 SRP72O76094 671 aaKnown RBP14.34□□□□□ -0.11
DDX54-203ENST00000546869 SLC4A1P02730 911 aa14.34□□□□□ -0.11
DDX54-203ENST00000546869 ALPPL2P10696 532 aa14.34□□□□□ -0.11
DDX54-203ENST00000546869 CTSEP14091 401 aa14.34□□□□□ -0.11
DDX54-203ENST00000546869 PEX6Q13608 980 aa14.34□□□□□ -0.11
DDX54-203ENST00000546869 LRP8Q14114 963 aa14.34□□□□□ -0.11
DDX54-203ENST00000546869 PTPRCAPQ14761 206 aa14.34□□□□□ -0.11
DDX54-203ENST00000546869 TRIP6Q15654 476 aaKnown RBP14.34□□□□□ -0.11
DDX54-203ENST00000546869 CHRNA6Q15825 494 aa14.34□□□□□ -0.11
DDX54-203ENST00000546869 PYCR3Q53H96 274 aa14.34□□□□□ -0.11
DDX54-203ENST00000546869 PRRT3Q5FWE3 981 aa14.34□□□□□ -0.11
DDX54-203ENST00000546869 LDLRAP1Q5SW96 308 aa14.34□□□□□ -0.11
DDX54-203ENST00000546869 KCTD16Q68DU8 428 aa14.34□□□□□ -0.11
DDX54-203ENST00000546869 SNX20Q7Z614 316 aa14.34□□□□□ -0.11
DDX54-203ENST00000546869 HOOK3Q86VS8 718 aa14.34□□□□□ -0.11
DDX54-203ENST00000546869 GKN2Q86XP6 184 aa14.34□□□□□ -0.11
DDX54-203ENST00000546869 KLHL7Q8IXQ5 586 aa14.34□□□□□ -0.11
DDX54-203ENST00000546869 PPIL6Q8IXY8 311 aa14.34□□□□□ -0.11
DDX54-203ENST00000546869 RBFAQ8N0V3 343 aa14.34□□□□□ -0.11
DDX54-203ENST00000546869 NAT8LQ8N9F0 302 aa14.34□□□□□ -0.11
DDX54-203ENST00000546869 DDHD1Q8NEL9 900 aa14.34□□□□□ -0.11
DDX54-203ENST00000546869 GPBAR1Q8TDU6 330 aa14.34□□□□□ -0.11
DDX54-203ENST00000546869 LMX1AQ8TE12 382 aa14.34□□□□□ -0.11
DDX54-203ENST00000546869 PDXPQ96GD0 296 aa14.34□□□□□ -0.11
DDX54-203ENST00000546869 CDKN2AIPNLQ96HQ2 116 aa14.34□□□□□ -0.11
DDX54-203ENST00000546869 CLPBQ9H078 707 aa14.34□□□□□ -0.11
DDX54-203ENST00000546869 MRM3Q9HC36 420 aaKnown RBP14.34□□□□□ -0.11
DDX54-203ENST00000546869 CYP4F12Q9HCS2 524 aa14.34□□□□□ -0.11
DDX54-203ENST00000546869 XAB2Q9HCS7 855 aaKnown RBP14.34□□□□□ -0.11
DDX54-203ENST00000546869 MRPL40Q9NQ50 206 aaKnown RBP14.34□□□□□ -0.11
DDX54-203ENST00000546869 FKBPLQ9UIM3 349 aa14.34□□□□□ -0.11
DDX54-203ENST00000546869 SUFUQ9UMX1 484 aa14.34□□□□□ -0.11
DDX54-203ENST00000546869 BTBD3Q9Y2F9 522 aa14.34□□□□□ -0.11
DDX54-203ENST00000546869 TMEM98Q9Y2Y6 226 aa14.34□□□□□ -0.11
DDX54-203ENST00000546869 OAS3Q9Y6K5 1087 aaKnown RBP14.34□□□□□ -0.11
DDX54-203ENST00000546869 CABIN1Q9Y6J0 2220 aa14.34□□□□□ -0.11
DDX54-203ENST00000546869 TMEM131Q92545 1883 aa14.33□□□□□ -0.11
DDX54-203ENST00000546869 LAMA1P25391 3075 aa14.33□□□□□ -0.11
DDX54-203ENST00000546869 ASCC3Q8N3C0 2202 aaKnown RBP14.33□□□□□ -0.12
DDX54-203ENST00000546869 TRBV5-4A0A0C4DH59 114 aa14.33□□□□□ -0.12
DDX54-203ENST00000546869 MAGEB16A2A368 324 aa14.33□□□□□ -0.12
DDX54-203ENST00000546869 DCDC2BA2VCK2 349 aa14.33□□□□□ -0.12
DDX54-203ENST00000546869 DNALI1O14645 258 aaPredicted RBP14.33□□□□□ -0.12
DDX54-203ENST00000546869 YY2O15391 372 aa14.33□□□□□ -0.12
DDX54-203ENST00000546869 TNFSF14O43557 240 aa14.33□□□□□ -0.12
DDX54-203ENST00000546869 UGT1A9O60656 530 aa14.33□□□□□ -0.12
DDX54-203ENST00000546869 PRAMEF1O95521 474 aa14.33□□□□□ -0.12
DDX54-203ENST00000546869 UGT1A6P19224 532 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms