RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 KLHL7Q8IXQ5 586 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 KLHDC8BQ8IXV7 354 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 TAB3Q8N5C8 712 aaPredicted RBP6.35□□□□□ -1.39
PRKDC-211ENST00000546304 SPATA4Q8NEY3 305 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 LPCAT1Q8NF37 534 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 OR14C36Q8NHC7 312 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 SLCO2A1Q92959 643 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 RAB7BQ96AH8 199 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 FEM1CQ96JP0 617 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 RUNDC3BQ96NL0 473 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 MCCC1Q96RQ3 725 aaPredicted RBP6.35□□□□□ -1.39
PRKDC-211ENST00000546304 TRIB3Q96RU7 358 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 MLPHQ9BV36 600 aaPredicted RBP6.35□□□□□ -1.39
PRKDC-211ENST00000546304 FICDQ9BVA6 458 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 BTBD1Q9H0C5 482 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 NEUROG2Q9H2A3 272 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 SGK2Q9HBY8 427 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 PREBQ9HCU5 417 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 PCDH12Q9NPG4 1184 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 ITM2CQ9NQX7 267 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 GOLGA6AQ9NYA3 693 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 UBP1Q9NZI7 540 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 PCYOX1Q9UHG3 505 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 MBD1Q9UIS9 605 aaPredicted RBP6.35□□□□□ -1.39
PRKDC-211ENST00000546304 GGT7Q9UJ14 662 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 RPL26L1Q9UNX3 145 aaKnown RBP6.35□□□□□ -1.39
PRKDC-211ENST00000546304 CHKBQ9Y259 395 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 INVSQ9Y283 1065 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 DRG1Q9Y295 367 aaKnown RBP6.35□□□□□ -1.39
PRKDC-211ENST00000546304 NCKAP1Q9Y2A7 1128 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 AAR2Q9Y312 384 aaKnown RBP6.35□□□□□ -1.39
PRKDC-211ENST00000546304 SNX11Q9Y5W9 270 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 R4GN57 208 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 CFAP54Q96N23 3096 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 CEP250Q9BV73 2442 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 CABIN1Q9Y6J0 2220 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 A0A0J9YYE9 177 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 PRR23AA6NEV1 266 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 NPIPB15A6NHN6 443 aaPredicted RBP6.34□□□□□ -1.39
PRKDC-211ENST00000546304 FAM47DPA6NHR8 397 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 ERI2A8K979 691 aaKnown RBP6.34□□□□□ -1.39
PRKDC-211ENST00000546304 MEI4A8MW99 385 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 E7EVH7 732 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 NEMP1O14524 444 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 AP1G1O43747 822 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 NDUFS2O75306 463 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 METTL18O95568 372 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 AP2A1O95782 977 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 NDST3O95803 873 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 PRLP01236 227 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 TRBC1P01850 177 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 SLC4A1P02730 911 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 PRKCGP05129 697 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 FGF1P05230 155 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 APRTP07741 180 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 PDHA1P08559 390 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 ALPIP09923 528 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 ATXN1LP0C7T5 689 aaKnown RBP6.34□□□□□ -1.39
PRKDC-211ENST00000546304 ETS1P14921 441 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 HLA-DPA1P20036 260 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 LHCGRP22888 699 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 CNR2P34972 360 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 RPL22P35268 128 aaKnown RBP6.34□□□□□ -1.39
PRKDC-211ENST00000546304 FDFT1P37268 417 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 POLR2LP62875 67 aaKnown RBP6.34□□□□□ -1.39
PRKDC-211ENST00000546304 BASP1P80723 227 aaKnown RBP6.34□□□□□ -1.39
PRKDC-211ENST00000546304 DR1Q01658 176 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 CDK18Q07002 472 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 RALGDSQ12967 914 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 GPS1Q13098 491 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 SEMA5AQ13591 1074 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 PTK6Q13882 451 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 TUBB2AQ13885 445 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 DHX34Q14147 1143 aaKnown RBP6.34□□□□□ -1.39
PRKDC-211ENST00000546304 PPP1R7Q15435 360 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 TRIP13Q15645 432 aaPredicted RBP6.34□□□□□ -1.39
PRKDC-211ENST00000546304 ELF2Q15723 593 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 KCTD19Q17RG1 926 aaPredicted RBP6.34□□□□□ -1.39
PRKDC-211ENST00000546304 PARP6Q2NL67 630 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 PMS2CLQ68D20 193 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 KIAA1161Q6NSJ0 714 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 C4orf22Q6V702 233 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.34□□□□□ -1.39
PRKDC-211ENST00000546304 SLC36A4Q6YBV0 504 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 CEP68Q76N32 757 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 DPPA4Q7L190 304 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 TRIM69Q86WT6 500 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 JAMLQ86YT9 394 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 FRMD1Q8N878 549 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 MFSD2AQ8NA29 543 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 OR2T34Q8NGX1 318 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 ATL2Q8NHH9 583 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 CCHCR1Q8TD31 782 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 HCAR2Q8TDS4 363 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 PIH1D2Q8WWB5 315 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 SNX19Q92543 992 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 LRRC45Q96CN5 670 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 HSPA12BQ96MM6 686 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 KRT12Q99456 494 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 TBL1YQ9BQ87 522 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms