RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 KCNK4Q9NYG8 393 aa9.29□□□□□ -0.92
YBX3-218ENST00000546298 ADAMTS20P59510 1910 aa9.29□□□□□ -0.92
YBX3-218ENST00000546298 TDRD6O60522 2096 aaKnown RBP9.28□□□□□ -0.92
YBX3-218ENST00000546298 A0A0A6YYK5 440 aaPredicted RBP9.28□□□□□ -0.92
YBX3-218ENST00000546298 OR5K4A6NMS3 321 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 K7ENP7 123 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 PPM1DO15297 605 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 CST8O60676 142 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 DNAJC6O75061 913 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 ZRANB2O95218 330 aaKnown RBP eCLIP9.28□□□□□ -0.92
YBX3-218ENST00000546298 NDST3O95803 873 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 ATP1A1P05023 1023 aaKnown RBP9.28□□□□□ -0.92
YBX3-218ENST00000546298 LIPCP11150 499 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 HGFP14210 728 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 CD1CP29017 333 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 CSTF2P33240 577 aaKnown RBP eCLIP9.28□□□□□ -0.92
YBX3-218ENST00000546298 CYLC1P35663 651 aaPredicted RBP9.28□□□□□ -0.92
YBX3-218ENST00000546298 FASLGP48023 281 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 PPM1FP49593 454 aaPredicted RBP9.28□□□□□ -0.92
YBX3-218ENST00000546298 MAPK10P53779 464 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 DCDC1P59894 354 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 TBX2Q13207 712 aaPredicted RBP9.28□□□□□ -0.92
YBX3-218ENST00000546298 CLN3Q13286 438 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 TFDP3Q5H9I0 405 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 ZNF569Q5MCW4 686 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 PDPK2PQ6A1A2 396 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 INO80CQ6PI98 192 aaPredicted RBP9.28□□□□□ -0.92
YBX3-218ENST00000546298 SARM1Q6SZW1 724 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 MFSD7Q6UXD7 560 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 NPNTQ6UXI9 565 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 CHST15Q7LFX5 561 aaPredicted RBP9.28□□□□□ -0.92
YBX3-218ENST00000546298 LYSMD3Q7Z3D4 306 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 SLC9B2Q86UD5 537 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 CCDC170Q8IYT3 715 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 RCOR2Q8IZ40 523 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 SFRP1Q8N474 314 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 TRAM1L1Q8N609 369 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 AGBL5Q8NDL9 886 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 OR4D9Q8NGE8 314 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 TFB1MQ8WVM0 346 aaKnown RBP9.28□□□□□ -0.92
YBX3-218ENST00000546298 PATE1Q8WXA2 126 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 P3H4Q92791 437 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 USP7Q93009 1102 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 CALR3Q96L12 384 aaKnown RBP9.28□□□□□ -0.92
YBX3-218ENST00000546298 TEKT5Q96M29 485 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 TRIB3Q96RU7 358 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 VAT1Q99536 393 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 SLC38A3Q99624 504 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 FERMT1Q9BQL6 677 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 HERPUD2Q9BSE4 406 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 SPATA16Q9BXB7 569 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.28□□□□□ -0.92
YBX3-218ENST00000546298 ZMYND15Q9H091 742 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 CARD9Q9H257 536 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 SEMA6CQ9H3T2 930 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 TRIM39Q9HCM9 518 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 FAM153AQ9UHL3 310 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 CNOT6Q9ULM6 557 aaKnown RBP9.28□□□□□ -0.92
YBX3-218ENST00000546298 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.28□□□□□ -0.92
YBX3-218ENST00000546298 PLEKHM1Q9Y4G2 1056 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 ALG6Q9Y672 507 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 AKAP13Q12802 2813 aa9.28□□□□□ -0.92
YBX3-218ENST00000546298 ATRXP46100 2492 aa9.27□□□□□ -0.93
YBX3-218ENST00000546298 TRBV23OR9-2A0A075B6M9 112 aa9.27□□□□□ -0.93
YBX3-218ENST00000546298 IGHV1OR21-1A0A087WYE8 117 aa9.27□□□□□ -0.93
YBX3-218ENST00000546298 KIR2DS5A0A0G2JLQ3 304 aa9.27□□□□□ -0.93
YBX3-218ENST00000546298 A0A0G2JNG1 304 aa9.27□□□□□ -0.93
YBX3-218ENST00000546298 IGHV5-10-1A0A0J9YXX1 117 aa9.27□□□□□ -0.93
YBX3-218ENST00000546298 FADS2P1A8MWK0 482 aa9.27□□□□□ -0.93
YBX3-218ENST00000546298 KIR2DS3K7RE56 304 aa9.27□□□□□ -0.93
YBX3-218ENST00000546298 GRID2O43424 1007 aa9.27□□□□□ -0.93
YBX3-218ENST00000546298 DUX1O43812 170 aa9.27□□□□□ -0.93
YBX3-218ENST00000546298 NUAK1O60285 661 aa9.27□□□□□ -0.93
YBX3-218ENST00000546298 SLC25A14O95258 325 aaPredicted RBP9.27□□□□□ -0.93
YBX3-218ENST00000546298 IPO7O95373 1038 aaKnown RBP9.27□□□□□ -0.93
YBX3-218ENST00000546298 EPOP01588 193 aa9.27□□□□□ -0.93
YBX3-218ENST00000546298 ACP5P13686 325 aa9.27□□□□□ -0.93
YBX3-218ENST00000546298 PTPN3P26045 913 aa9.27□□□□□ -0.93
YBX3-218ENST00000546298 CDKN2BP42772 138 aa9.27□□□□□ -0.93
YBX3-218ENST00000546298 CLCNKAP51800 687 aa9.27□□□□□ -0.93
YBX3-218ENST00000546298 LIMK2P53671 638 aa9.27□□□□□ -0.93
YBX3-218ENST00000546298 HHEXQ03014 270 aa9.27□□□□□ -0.93
YBX3-218ENST00000546298 GALNT3Q14435 633 aa9.27□□□□□ -0.93
YBX3-218ENST00000546298 KIR2DS5Q14953 304 aa9.27□□□□□ -0.93
YBX3-218ENST00000546298 C16orf72Q14CZ0 275 aa9.27□□□□□ -0.93
YBX3-218ENST00000546298 PCSK7Q16549 785 aa9.27□□□□□ -0.93
YBX3-218ENST00000546298 ZDHHC20Q5W0Z9 365 aa9.27□□□□□ -0.93
YBX3-218ENST00000546298 KAZNQ674X7 775 aa9.27□□□□□ -0.93
YBX3-218ENST00000546298 TMEM71Q6P5X7 295 aa9.27□□□□□ -0.93
YBX3-218ENST00000546298 IYDQ6PHW0 289 aa9.27□□□□□ -0.93
YBX3-218ENST00000546298 SPOCD1Q6ZMY3 1216 aa9.27□□□□□ -0.93
YBX3-218ENST00000546298 KDELC2Q7Z4H8 507 aa9.27□□□□□ -0.93
YBX3-218ENST00000546298 TMC3Q7Z5M5 1100 aa9.27□□□□□ -0.93
YBX3-218ENST00000546298 PHYKPLQ8IUZ5 450 aa9.27□□□□□ -0.93
YBX3-218ENST00000546298 KATNAL2Q8IYT4 538 aa9.27□□□□□ -0.93
YBX3-218ENST00000546298 SLC37A2Q8TED4 501 aa9.27□□□□□ -0.93
YBX3-218ENST00000546298 TADA1Q96BN2 335 aa9.27□□□□□ -0.93
YBX3-218ENST00000546298 RBM41Q96IZ5 413 aaKnown RBP9.27□□□□□ -0.93
YBX3-218ENST00000546298 CCDC74BQ96LY2 380 aa9.27□□□□□ -0.93
YBX3-218ENST00000546298 TAAR9Q96RI9 348 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms