RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 TUBB4AP04350 444 aa16.69■□□□□ 0.26
LTBR-215ENST00000546296 CEACAM1P13688 526 aa16.69■□□□□ 0.26
LTBR-215ENST00000546296 TPSB2P20231 275 aa16.69■□□□□ 0.26
LTBR-215ENST00000546296 HADHAP40939 763 aa16.69■□□□□ 0.26
LTBR-215ENST00000546296 GNPDA1P46926 289 aa16.69■□□□□ 0.26
LTBR-215ENST00000546296 SESN2P58004 480 aaPredicted RBP16.69■□□□□ 0.26
LTBR-215ENST00000546296 DR1Q01658 176 aa16.69■□□□□ 0.26
LTBR-215ENST00000546296 ELOCQ15369 112 aa16.69■□□□□ 0.26
LTBR-215ENST00000546296 TPSAB1Q15661 275 aa16.69■□□□□ 0.26
LTBR-215ENST00000546296 ATP13A5Q4VNC0 1218 aa16.69■□□□□ 0.26
LTBR-215ENST00000546296 CCDC38Q502W7 563 aa16.69■□□□□ 0.26
LTBR-215ENST00000546296 KCTD16Q68DU8 428 aa16.69■□□□□ 0.26
LTBR-215ENST00000546296 PSAPL1Q6NUJ1 521 aa16.69■□□□□ 0.26
LTBR-215ENST00000546296 KANSL1Q7Z3B3 1105 aa16.69■□□□□ 0.26
LTBR-215ENST00000546296 DGLUCYQ7Z3D6 616 aa16.69■□□□□ 0.26
LTBR-215ENST00000546296 PHYKPLQ8IUZ5 450 aa16.69■□□□□ 0.26
LTBR-215ENST00000546296 FSTL5Q8N475 847 aaPredicted RBP16.69■□□□□ 0.26
LTBR-215ENST00000546296 OR13C4Q8NGS5 318 aa16.69■□□□□ 0.26
LTBR-215ENST00000546296 GLYATL1Q969I3 302 aa16.69■□□□□ 0.26
LTBR-215ENST00000546296 TBATAQ96M53 351 aa16.69■□□□□ 0.26
LTBR-215ENST00000546296 LRRC61Q9BV99 259 aa16.69■□□□□ 0.26
LTBR-215ENST00000546296 ARFGAP3Q9NP61 516 aa16.69■□□□□ 0.26
LTBR-215ENST00000546296 FTSJ1Q9UET6 329 aa16.69■□□□□ 0.26
LTBR-215ENST00000546296 ASIC3Q9UHC3 531 aa16.69■□□□□ 0.26
LTBR-215ENST00000546296 FKBPLQ9UIM3 349 aa16.69■□□□□ 0.26
LTBR-215ENST00000546296 APPL1Q9UKG1 709 aa16.69■□□□□ 0.26
LTBR-215ENST00000546296 SUFUQ9UMX1 484 aa16.69■□□□□ 0.26
LTBR-215ENST00000546296 SLC17A4Q9Y2C5 497 aa16.69■□□□□ 0.26
LTBR-215ENST00000546296 NEU2Q9Y3R4 380 aa16.69■□□□□ 0.26
LTBR-215ENST00000546296 GPSM3Q9Y4H4 160 aa16.69■□□□□ 0.26
LTBR-215ENST00000546296 CSNK1G3Q9Y6M4 447 aa16.69■□□□□ 0.26
LTBR-215ENST00000546296 CCDC78A2IDD5 438 aa16.68■□□□□ 0.26
LTBR-215ENST00000546296 HEATR9A2RTY3 570 aa16.68■□□□□ 0.26
LTBR-215ENST00000546296 KIF2AO00139 706 aaPredicted RBP16.68■□□□□ 0.26
LTBR-215ENST00000546296 UGT1A9O60656 530 aa16.68■□□□□ 0.26
LTBR-215ENST00000546296 URI1O94763 535 aaPredicted RBP16.68■□□□□ 0.26
LTBR-215ENST00000546296 KCNK5O95279 499 aa16.68■□□□□ 0.26
LTBR-215ENST00000546296 LDOC1O95751 146 aaPredicted RBP16.68■□□□□ 0.26
LTBR-215ENST00000546296 IVLP07476 585 aa16.68■□□□□ 0.26
LTBR-215ENST00000546296 ANXA6P08133 673 aa16.68■□□□□ 0.26
LTBR-215ENST00000546296 UGT1A6P19224 532 aa16.68■□□□□ 0.26
LTBR-215ENST00000546296 UGT1A1P22309 533 aa16.68■□□□□ 0.26
LTBR-215ENST00000546296 UGT1A4P22310 534 aa16.68■□□□□ 0.26
LTBR-215ENST00000546296 ADRA1DP25100 572 aa16.68■□□□□ 0.26
LTBR-215ENST00000546296 UGT1A3P35503 534 aa16.68■□□□□ 0.26
LTBR-215ENST00000546296 UGT1A5P35504 534 aa16.68■□□□□ 0.26
LTBR-215ENST00000546296 NPY2RP49146 381 aa16.68■□□□□ 0.26
LTBR-215ENST00000546296 ZNF140P52738 457 aaPredicted RBP16.68■□□□□ 0.26
LTBR-215ENST00000546296 ITGA9Q13797 1035 aa16.68■□□□□ 0.26
LTBR-215ENST00000546296 TRIP6Q15654 476 aaKnown RBP16.68■□□□□ 0.26
LTBR-215ENST00000546296 SKIDA1Q1XH10 827 aa16.68■□□□□ 0.26
LTBR-215ENST00000546296 SYDE1Q6ZW31 735 aaPredicted RBP16.68■□□□□ 0.26
LTBR-215ENST00000546296 ZNF398Q8TD17 642 aa16.68■□□□□ 0.26
LTBR-215ENST00000546296 DTX3LQ8TDB6 740 aa16.68■□□□□ 0.26
LTBR-215ENST00000546296 STYXQ8WUJ0 223 aa16.68■□□□□ 0.26
LTBR-215ENST00000546296 SCG3Q8WXD2 468 aaKnown RBP16.68■□□□□ 0.26
LTBR-215ENST00000546296 DNAJC1Q96KC8 554 aaKnown RBP16.68■□□□□ 0.26
LTBR-215ENST00000546296 KRT12Q99456 494 aa16.68■□□□□ 0.26
LTBR-215ENST00000546296 TMEM168Q9H0V1 697 aa16.68■□□□□ 0.26
LTBR-215ENST00000546296 OR2AG1Q9H205 316 aa16.68■□□□□ 0.26
LTBR-215ENST00000546296 UGT1A7Q9HAW7 530 aa16.68■□□□□ 0.26
LTBR-215ENST00000546296 UGT1A10Q9HAW8 530 aa16.68■□□□□ 0.26
LTBR-215ENST00000546296 UGT1A8Q9HAW9 530 aa16.68■□□□□ 0.26
LTBR-215ENST00000546296 TRIM39Q9HCM9 518 aa16.68■□□□□ 0.26
LTBR-215ENST00000546296 BFARQ9NZS9 450 aa16.68■□□□□ 0.26
LTBR-215ENST00000546296 ZNHIT2Q9UHR6 403 aa16.68■□□□□ 0.26
LTBR-215ENST00000546296 OAS3Q9Y6K5 1087 aaKnown RBP16.68■□□□□ 0.26
LTBR-215ENST00000546296 TCRBV7S3A2A0A539 114 aa16.67■□□□□ 0.26
LTBR-215ENST00000546296 LMO7DNF2Z398 122 aa16.67■□□□□ 0.26
LTBR-215ENST00000546296 CCL22O00626 93 aa16.67■□□□□ 0.26
LTBR-215ENST00000546296 TRIM38O00635 465 aa16.67■□□□□ 0.26
LTBR-215ENST00000546296 GIPC1O14908 333 aa16.67■□□□□ 0.26
LTBR-215ENST00000546296 CBFA2T3O75081 653 aa16.67■□□□□ 0.26
LTBR-215ENST00000546296 SRP72O76094 671 aaKnown RBP16.67■□□□□ 0.26
LTBR-215ENST00000546296 PRAMEF1O95521 474 aa16.67■□□□□ 0.26
LTBR-215ENST00000546296 PTGIRP43119 386 aa16.67■□□□□ 0.26
LTBR-215ENST00000546296 PTK6Q13882 451 aa16.67■□□□□ 0.26
LTBR-215ENST00000546296 KCNJ11Q14654 390 aa16.67■□□□□ 0.26
LTBR-215ENST00000546296 DEFB133Q30KQ1 61 aa16.67■□□□□ 0.26
LTBR-215ENST00000546296 PPM1JQ5JR12 505 aa16.67■□□□□ 0.26
LTBR-215ENST00000546296 ZNF648Q5T619 568 aaPredicted RBP16.67■□□□□ 0.26
LTBR-215ENST00000546296 LRRC8BQ6P9F7 803 aa16.67■□□□□ 0.26
LTBR-215ENST00000546296 NLRP9Q7RTR0 991 aa16.67■□□□□ 0.26
LTBR-215ENST00000546296 TAF8Q7Z7C8 310 aa16.67■□□□□ 0.26
LTBR-215ENST00000546296 GKN2Q86XP6 184 aa16.67■□□□□ 0.26
LTBR-215ENST00000546296 GALNT13Q8IUC8 556 aa16.67■□□□□ 0.26
LTBR-215ENST00000546296 SPATA4Q8NEY3 305 aa16.67■□□□□ 0.26
LTBR-215ENST00000546296 PPHLN1Q8NEY8 458 aaKnown RBP16.67■□□□□ 0.26
LTBR-215ENST00000546296 OR4C6Q8NH72 309 aa16.67■□□□□ 0.26
LTBR-215ENST00000546296 PTCD2Q8WV60 388 aaKnown RBP16.67■□□□□ 0.26
LTBR-215ENST00000546296 CPT1BQ92523 772 aa16.67■□□□□ 0.26
LTBR-215ENST00000546296 SLCO2A1Q92959 643 aa16.67■□□□□ 0.26
LTBR-215ENST00000546296 CNDP2Q96KP4 475 aaKnown RBP16.67■□□□□ 0.26
LTBR-215ENST00000546296 TTC25Q96NG3 672 aa16.67■□□□□ 0.26
LTBR-215ENST00000546296 VPS35Q96QK1 796 aa16.67■□□□□ 0.26
LTBR-215ENST00000546296 DUSP23Q9BVJ7 150 aa16.67■□□□□ 0.26
LTBR-215ENST00000546296 CLPBQ9H078 707 aa16.67■□□□□ 0.26
LTBR-215ENST00000546296 ASB8Q9H765 288 aa16.67■□□□□ 0.26
LTBR-215ENST00000546296 NLE1Q9NVX2 485 aaPredicted RBP16.67■□□□□ 0.26
LTBR-215ENST00000546296 NLGN3Q9NZ94 848 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms