RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 INPPL1O15357 1258 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 KRT8P05787 483 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 HOXB2P14652 356 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 GJA1P17302 382 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 TACR2P21452 398 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 CSTF2P33240 577 aaKnown RBP eCLIP8.57□□□□□ -1.04
CLIP1-218ENST00000545889 CTSOP43234 321 aaPredicted RBP8.57□□□□□ -1.04
CLIP1-218ENST00000545889 ZNF143P52747 638 aaPredicted RBP8.57□□□□□ -1.04
CLIP1-218ENST00000545889 BMPR2Q13873 1038 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 ATP13A5Q4VNC0 1218 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 AFTPHQ6ULP2 937 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 ZNF621Q6ZSS3 439 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 PIGWQ7Z7B1 504 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 TTC29Q8NA56 475 aaPredicted RBP8.57□□□□□ -1.04
CLIP1-218ENST00000545889 FAM46DQ8NEK8 389 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 ASZ1Q8WWH4 475 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 CNDP1Q96KN2 507 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 LMLNQ96KR4 655 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 RPL10LQ96L21 214 aaKnown RBP8.57□□□□□ -1.04
CLIP1-218ENST00000545889 KLHL4Q9C0H6 718 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 SEMA4AQ9H3S1 761 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 MANSC1Q9H8J5 431 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 WDR27A2RRH5 827 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 B2RBV5 119 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 APOC4-APOC2K7ER74 178 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 PMM2O15305 246 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 HLA-DQA2P01906 255 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 APOC2P02655 101 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 ITGAVP06756 1048 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 TFE3P19532 575 aaPredicted RBP8.57□□□□□ -1.04
CLIP1-218ENST00000545889 VARSP26640 1264 aaKnown RBP8.57□□□□□ -1.04
CLIP1-218ENST00000545889 SSR2P43308 183 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 NEK3P51956 506 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 YBEYP58557 167 aaPredicted RBP8.57□□□□□ -1.04
CLIP1-218ENST00000545889 MMRN1Q13201 1228 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 CNGA3Q16281 694 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 ASTE1Q2TB18 679 aaPredicted RBP8.57□□□□□ -1.04
CLIP1-218ENST00000545889 DNAL1Q4LDG9 190 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 FNBP1LQ5T0N5 605 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 LHX8Q68G74 356 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 RNF19BQ6ZMZ0 732 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 CHST15Q7LFX5 561 aaPredicted RBP8.57□□□□□ -1.04
CLIP1-218ENST00000545889 PSTKQ8IV42 348 aaKnown RBP8.57□□□□□ -1.04
CLIP1-218ENST00000545889 CENPLQ8N0S6 344 aaPredicted RBP8.57□□□□□ -1.04
CLIP1-218ENST00000545889 RBFAQ8N0V3 343 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 CELF5Q8N6W0 485 aaKnown RBP8.57□□□□□ -1.04
CLIP1-218ENST00000545889 SCAMP5Q8TAC9 235 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 CAPSLQ8WWF8 208 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 STARD8Q92502 1023 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 CENPTQ96BT3 561 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 IL22Q9GZX6 179 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 TNKS2Q9H2K2 1166 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 ATAD3AQ9NVI7 634 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 SCN3BQ9NY72 215 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 RABGEF1Q9UJ41 708 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 CHKBQ9Y259 395 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 WFS1O76024 890 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 ITGB1P05556 798 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 LSAMPQ13449 338 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 PLA2G4EQ3MJ16 856 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 PCID2Q5JVF3 399 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 LINGO4Q6UY18 593 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 C15orf39Q6ZRI6 1047 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 ZSCAN1Q8NBB4 408 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 STAG3L4Q8TBR4 150 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 ZNF398Q8TD17 642 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 HGH1Q9BTY7 390 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 CDH19Q9H159 772 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 SUSD2Q9UGT4 822 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 MRTO4Q9UKD2 239 aaKnown RBP8.57□□□□□ -1.04
CLIP1-218ENST00000545889 PHTF1Q9UMS5 762 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 YIPF1Q9Y548 306 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 DICER1Q9UPY3 1922 aaKnown RBP8.57□□□□□ -1.04
CLIP1-218ENST00000545889 ASXL3Q9C0F0 2248 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 PSME4Q14997 1843 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 SLCO1B7G3V0H7 640 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 EIF3FO00303 357 aaPredicted RBP8.57□□□□□ -1.04
CLIP1-218ENST00000545889 CBFA2T3O75081 653 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 NTRK1P04629 796 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 FGF1P05230 155 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 KLK3P07288 261 aaPredicted RBP8.57□□□□□ -1.04
CLIP1-218ENST00000545889 CERCAMQ5T4B2 595 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 MON1BQ7L1V2 547 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 HEATR4Q86WZ0 1026 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 XYLT1Q86Y38 959 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 FAM126BQ8IXS8 530 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 IL22RA1Q8N6P7 574 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 NECTIN4Q96NY8 510 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 DPYSL5Q9BPU6 564 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 SLC39A8Q9C0K1 460 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 SIRPGQ9P1W8 387 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 SNX6Q9UNH7 406 aa8.57□□□□□ -1.04
CLIP1-218ENST00000545889 DOCK5Q9H7D0 1870 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 A0A096LPK6 155 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 MATN2O00339 956 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 CAPN1P07384 714 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 PGAM1P18669 254 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 AGXTP21549 392 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 S100A3P33764 101 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 FBXO25Q8TCJ0 367 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms