RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 PYGLP06737 847 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 HOXC4P09017 264 aaPredicted RBP7.36□□□□□ -1.23
CPSF7-224ENST00000544990 ALPIP09923 528 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 GOLGA6DP0CG33 693 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 EPXP11678 715 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 TSHRP16473 764 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 CKMT2P17540 419 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 PTPN7P35236 360 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 HNF1BP35680 557 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 TRIM23P36406 574 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 TNNT3P45378 269 aaPredicted RBP7.36□□□□□ -1.23
CPSF7-224ENST00000544990 ATP5OP48047 213 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 MARCKSL1P49006 195 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 ARL4DP49703 201 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 HK3P52790 923 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 KIAA1024LP59773 190 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 NIPAL4Q0D2K0 466 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 ZBTB17Q13105 803 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 EIF2B5Q13144 721 aaKnown RBP7.36□□□□□ -1.23
CPSF7-224ENST00000544990 ILKQ13418 452 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 XRCC4Q13426 336 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 NFATC4Q14934 902 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 PRKD1Q15139 912 aaPredicted RBP7.36□□□□□ -1.23
CPSF7-224ENST00000544990 ELOCQ15369 112 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 SLC14A2Q15849 920 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 CNGA3Q16281 694 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 CCDC157Q569K6 752 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 ESRP1Q6NXG1 681 aaKnown RBP7.36□□□□□ -1.23
CPSF7-224ENST00000544990 PNCKQ6P2M8 343 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 BBS12Q6ZW61 710 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 PID1Q7Z2X4 250 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 ZC3H18Q86VM9 953 aaKnown RBP7.36□□□□□ -1.23
CPSF7-224ENST00000544990 HID1Q8IV36 788 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 RAVER1Q8IY67 606 aaKnown RBP7.36□□□□□ -1.23
CPSF7-224ENST00000544990 PHACTR4Q8IZ21 702 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 CBARPQ8N350 705 aaPredicted RBP7.36□□□□□ -1.23
CPSF7-224ENST00000544990 SDR16C5Q8N3Y7 309 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 FSTL5Q8N475 847 aaPredicted RBP7.36□□□□□ -1.23
CPSF7-224ENST00000544990 CNTD1Q8N815 330 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 GALNT6Q8NCL4 622 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 ZNF548Q8NEK5 533 aaPredicted RBP7.36□□□□□ -1.23
CPSF7-224ENST00000544990 LPCAT1Q8NF37 534 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 CCHCR1Q8TD31 782 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 LMX1AQ8TE12 382 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 EDARADDQ8WWZ3 215 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 HAUS1Q96CS2 278 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 DTD2Q96FN9 168 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 IMP4Q96G21 291 aaKnown RBP7.36□□□□□ -1.23
CPSF7-224ENST00000544990 TEKT5Q96M29 485 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 COQ10AQ96MF6 247 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 WDR92Q96MX6 357 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 SRPK1Q96SB4 655 aaKnown RBP7.36□□□□□ -1.23
CPSF7-224ENST00000544990 RBM15Q96T37 977 aaKnown RBP eCLIP7.36□□□□□ -1.23
CPSF7-224ENST00000544990 DESI2Q9BSY9 194 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 RSRP1Q9BUV0 290 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 HEMGNQ9BXL5 484 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 OSBPL8Q9BZF1 889 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 ADAM19Q9H013 955 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 SLC25A51Q9H1U9 297 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 WDR26Q9H7D7 661 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 USP29Q9HBJ7 922 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 GLOD4Q9HC38 313 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 PHPT1Q9NRX4 125 aaPredicted RBP7.36□□□□□ -1.23
CPSF7-224ENST00000544990 UCKL1Q9NWZ5 548 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 GOLGA6AQ9NYA3 693 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 NCKIPSDQ9NZQ3 722 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 SAE1Q9UBE0 346 aaPredicted RBP7.36□□□□□ -1.23
CPSF7-224ENST00000544990 KLQ9UEF7 1012 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 MSRB2Q9Y3D2 182 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 NEUROG3Q9Y4Z2 214 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 OR1A2Q9Y585 309 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 PTPRBP23467 1997 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 NCOR2Q9Y618 2525 aa7.35□□□□□ -1.23
CPSF7-224ENST00000544990 FAM221BA6H8Z2 402 aa7.35□□□□□ -1.23
CPSF7-224ENST00000544990 GOLGA6L9A6NEM1 432 aa7.35□□□□□ -1.23
CPSF7-224ENST00000544990 CAPN8A6NHC0 703 aa7.35□□□□□ -1.23
CPSF7-224ENST00000544990 K7ESM1 405 aa7.35□□□□□ -1.23
CPSF7-224ENST00000544990 TRIM38O00635 465 aa7.35□□□□□ -1.23
CPSF7-224ENST00000544990 TNFRSF10CO14798 259 aa7.35□□□□□ -1.23
CPSF7-224ENST00000544990 FBXO24O75426 580 aa7.35□□□□□ -1.23
CPSF7-224ENST00000544990 ZNF189O75820 626 aaPredicted RBP7.35□□□□□ -1.23
CPSF7-224ENST00000544990 TOP3BO95985 862 aaKnown RBP7.35□□□□□ -1.23
CPSF7-224ENST00000544990 PRLP01236 227 aa7.35□□□□□ -1.23
CPSF7-224ENST00000544990 ANXA6P08133 673 aa7.35□□□□□ -1.23
CPSF7-224ENST00000544990 MMP2P08253 660 aa7.35□□□□□ -1.23
CPSF7-224ENST00000544990 PECAM1P16284 738 aaPredicted RBP7.35□□□□□ -1.23
CPSF7-224ENST00000544990 GM2AP17900 193 aa7.35□□□□□ -1.23
CPSF7-224ENST00000544990 SPINK2P20155 84 aa7.35□□□□□ -1.23
CPSF7-224ENST00000544990 LHCGRP22888 699 aa7.35□□□□□ -1.23
CPSF7-224ENST00000544990 ACP1P24666 158 aa7.35□□□□□ -1.23
CPSF7-224ENST00000544990 PTPN3P26045 913 aa7.35□□□□□ -1.23
CPSF7-224ENST00000544990 TEAD1P28347 426 aa7.35□□□□□ -1.23
CPSF7-224ENST00000544990 ETV3P41162 512 aa7.35□□□□□ -1.23
CPSF7-224ENST00000544990 GPR1P46091 355 aa7.35□□□□□ -1.23
CPSF7-224ENST00000544990 SRP54P61011 504 aaKnown RBP7.35□□□□□ -1.23
CPSF7-224ENST00000544990 E2F1Q01094 437 aa7.35□□□□□ -1.23
CPSF7-224ENST00000544990 CDK18Q07002 472 aa7.35□□□□□ -1.23
CPSF7-224ENST00000544990 DPTQ07507 201 aa7.35□□□□□ -1.23
CPSF7-224ENST00000544990 PCDH1Q08174 1060 aa7.35□□□□□ -1.23
CPSF7-224ENST00000544990 ADCY2Q08462 1091 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms