RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 SLC6A2P23975 617 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 RPL3P39023 403 aaKnown RBP12.75□□□□□ -0.37
CHD4-211ENST00000544484 ATXN7L2Q5T6C5 722 aaPredicted RBP12.75□□□□□ -0.37
CHD4-211ENST00000544484 HIPK1Q86Z02 1210 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 IZUMO1Q8IYV9 350 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 DSELQ8IZU8 1212 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 OR14C36Q8NHC7 312 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 TRMOQ9BU70 441 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 SLC39A8Q9C0K1 460 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 RNF39Q9H2S5 420 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 DTLQ9NZJ0 730 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 FBXW11Q9UKB1 542 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 A8MUI8 341 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 GCATO75600 419 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 CFHP08603 1231 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 CDH4P55283 916 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 TRIM40Q6P9F5 258 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 BRI3BPQ8WY22 251 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 IPPKQ9H8X2 491 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.75□□□□□ -0.373e-9■□□□□ 9.2
CHD4-211ENST00000544484 RAB23Q9ULC3 237 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 AFDNP55196 1824 aaKnown RBP12.75□□□□□ -0.37
CHD4-211ENST00000544484 SYN3O14994 580 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 INSIG1O15503 277 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 APODP05090 189 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 PCCBP05166 539 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 PTGIRP43119 386 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 LIMK2P53671 638 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 RAB14P61106 215 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 PTP4A2Q12974 167 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 CRHR2Q13324 411 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 PEX6Q13608 980 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 SYPL2Q5VXT5 272 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 MFSD5Q6N075 450 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 R3HCC1LQ7Z5L2 792 aaKnown RBP12.75□□□□□ -0.37
CHD4-211ENST00000544484 RTL3Q8N8U3 475 aaKnown RBP12.75□□□□□ -0.37
CHD4-211ENST00000544484 SLAIN1Q8ND83 568 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 TWIST2Q8WVJ9 160 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 CYP2S1Q96SQ9 504 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 MINDY3Q9H8M7 445 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 POLR1BQ9H9Y6 1135 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 GULP1Q9UBP9 304 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 PCDHB1Q9Y5F3 818 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 DHX15O43143 795 aaKnown RBP12.75□□□□□ -0.37
CHD4-211ENST00000544484 ATG13O75143 517 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 CREB1P16220 341 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 CHRNA4P43681 627 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 C21orf59P57076 290 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 JAG1P78504 1218 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 CYP4F8P98187 520 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 TAF13Q15543 124 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 TRMT10BQ6PF06 316 aaKnown RBP12.75□□□□□ -0.37
CHD4-211ENST00000544484 AADATQ8N5Z0 425 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.75□□□□□ -0.37
CHD4-211ENST00000544484 OR2T12Q8NG77 320 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 TCF25Q9BQ70 676 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 GEMIN8Q9NWZ8 242 aaKnown RBP12.75□□□□□ -0.37
CHD4-211ENST00000544484 ZNF624Q9P2J8 865 aaPredicted RBP12.75□□□□□ -0.37
CHD4-211ENST00000544484 FKBPLQ9UIM3 349 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 ZNF780BQ9Y6R6 833 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 TP73O15350 636 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 NBNO60934 754 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 STK16O75716 305 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 UQCRBP14927 111 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 GNPDA1P46926 289 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 EPS8Q12929 822 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 VPS26BQ4G0F5 336 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 LPCAT4Q643R3 524 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 ECHDC2Q86YB7 292 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 CFAP206Q8IYR0 622 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 TIFAQ96CG3 184 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 C12orf42Q96LP6 360 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 SH3GL2Q99962 352 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 FNDC11Q9BVV2 318 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 EPB41L1Q9H4G0 881 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 ADGRE2Q9UHX3 823 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 CNOT6Q9ULM6 557 aaKnown RBP12.74□□□□□ -0.37
CHD4-211ENST00000544484 CENPXA8MT69 81 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 ZBTB11O95625 1053 aaPredicted RBP12.74□□□□□ -0.37
CHD4-211ENST00000544484 CACNG1Q06432 222 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 CPTPQ5TA50 214 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 ABRAXAS1Q6UWZ7 409 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 AGMOQ6ZNB7 445 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 CHSY3Q70JA7 882 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 UBASH3BQ8TF42 649 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 SPATA5L1Q9BVQ7 753 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 FAM83DQ9H4H8 585 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 LRTM1Q9HBL6 345 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 DNAJC11Q9NVH1 559 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 SPATA2Q9UM82 520 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 SLC38A8A6NNN8 435 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 TRAFD1O14545 582 aaPredicted RBP12.74□□□□□ -0.37
CHD4-211ENST00000544484 LGR5O75473 907 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 RPIAP49247 311 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.74□□□□□ -0.37
CHD4-211ENST00000544484 OLFM1Q99784 485 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 SLITRK2Q9H156 845 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 PHPT1Q9NRX4 125 aaPredicted RBP12.74□□□□□ -0.37
CHD4-211ENST00000544484 PSMD13Q9UNM6 376 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 AP3D1O14617 1153 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms