RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 HCN1O60741 890 aa15.39■□□□□ 0.05
CHD4-210ENST00000544040 NUDT17P0C025 328 aa15.39■□□□□ 0.05
CHD4-210ENST00000544040 ZNF135P52742 658 aaPredicted RBP15.39■□□□□ 0.05
CHD4-210ENST00000544040 THOC7Q6I9Y2 204 aaKnown RBP15.39■□□□□ 0.05
CHD4-210ENST00000544040 CPSF7Q8N684 471 aaKnown RBP15.39■□□□□ 0.05
CHD4-210ENST00000544040 SNX33Q8WV41 574 aa15.39■□□□□ 0.05
CHD4-210ENST00000544040 DNASE1L2Q92874 299 aa15.39■□□□□ 0.05
CHD4-210ENST00000544040 COPS5Q92905 334 aa15.39■□□□□ 0.05
CHD4-210ENST00000544040 GTPBP3Q969Y2 492 aaKnown RBP15.39■□□□□ 0.05
CHD4-210ENST00000544040 RBM4BQ9BQ04 359 aaKnown RBP15.39■□□□□ 0.05
CHD4-210ENST00000544040 RBM4Q9BWF3 364 aaKnown RBP15.39■□□□□ 0.05
CHD4-210ENST00000544040 CHMP1AQ9HD42 196 aaPredicted RBP15.39■□□□□ 0.05
CHD4-210ENST00000544040 ALKQ9UM73 1620 aa15.39■□□□□ 0.05
CHD4-210ENST00000544040 IRGMA1A4Y4 181 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 CHST10O43529 356 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 PRH1P02810 166 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 CCNHP51946 323 aaPredicted RBP15.38■□□□□ 0.05
CHD4-210ENST00000544040 PTGES3Q15185 160 aaKnown RBP15.38■□□□□ 0.05
CHD4-210ENST00000544040 MSANTD1Q6ZTZ1 278 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 TRABD2AQ86V40 505 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 MREGQ8N565 214 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 OR2L3Q8NG85 312 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 PORCNQ9H237 461 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 KCNE2Q9Y6J6 123 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 OR14I1A6ND48 311 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 APOC1P02654 83 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 LGALS2P05162 132 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 SSR2P43308 183 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 SLC30A6Q6NXT4 461 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 BEND5Q7L4P6 421 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 PURBQ96QR8 312 aaKnown RBP15.38■□□□□ 0.05
CHD4-210ENST00000544040 MRPL9Q9BYD2 267 aaKnown RBP15.38■□□□□ 0.05
CHD4-210ENST00000544040 TBC1D17Q9HA65 648 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 TIMMDC1Q9NPL8 285 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 FGBP02675 491 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 CXCR3P49682 368 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 XIAPP98170 497 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 DLG1Q12959 904 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 TNFAIP8L3Q5GJ75 292 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 RAVER1Q8IY67 606 aaKnown RBP15.38■□□□□ 0.05
CHD4-210ENST00000544040 LPGAT1Q92604 370 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 TULP4Q9NRJ4 1543 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 CDC42BPBQ9Y5S2 1711 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 OR7A10O76100 309 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 ANGPTL1O95841 491 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 COL6A1P12109 1028 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 MAN2A2P49641 1150 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 ATP6V0D1P61421 351 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 SMU1Q2TAY7 513 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 PPM1JQ5JR12 505 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 ADARB2Q9NS39 739 aaKnown RBP15.38■□□□□ 0.05
CHD4-210ENST00000544040 NCOA3Q9Y6Q9 1424 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 TCRBV5S4A2TA0A5A2 114 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 BBIP1A8MTZ0 92 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 XKRYO14609 159 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 EPHX2P34913 555 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 GNALP38405 381 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 ATXN1P54253 815 aaKnown RBP15.38■□□□□ 0.05
CHD4-210ENST00000544040 CBX2Q14781 532 aaPredicted RBP15.38■□□□□ 0.05
CHD4-210ENST00000544040 CCNYL2Q5T2Q4 361 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 RNASEH2BQ5TBB1 312 aaKnown RBP15.38■□□□□ 0.05
CHD4-210ENST00000544040 C1orf186Q6ZWK4 172 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 SPATA19Q7Z5L4 167 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 ARMC10Q8N2F6 343 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 ZNF670Q9BS34 389 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 FEM1AQ9BSK4 669 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 C3orf14Q9HBI5 128 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 EIF3KQ9UBQ5 218 aaKnown RBP15.38■□□□□ 0.05
CHD4-210ENST00000544040 PCDHB9Q9Y5E1 797 aa15.38■□□□□ 0.05
CHD4-210ENST00000544040 CLTCL1P53675 1640 aa15.37■□□□□ 0.05
CHD4-210ENST00000544040 CCNE2O96020 404 aa15.37■□□□□ 0.05
CHD4-210ENST00000544040 DNTTP04053 509 aa15.37■□□□□ 0.05
CHD4-210ENST00000544040 RPLP2P05387 115 aaKnown RBP15.37■□□□□ 0.05
CHD4-210ENST00000544040 IGFALSP35858 605 aa15.37■□□□□ 0.05
CHD4-210ENST00000544040 SPERTQ8NA61 448 aa15.37■□□□□ 0.05
CHD4-210ENST00000544040 ADCY4Q8NFM4 1077 aa15.37■□□□□ 0.05
CHD4-210ENST00000544040 P2RX7Q99572 595 aaKnown RBP15.37■□□□□ 0.05
CHD4-210ENST00000544040 TUBA8Q9NY65 449 aaPredicted RBP15.37■□□□□ 0.05
CHD4-210ENST00000544040 MLXQ9UH92 298 aa15.37■□□□□ 0.05
CHD4-210ENST00000544040 hCG_2039718K7EN88 272 aa15.37■□□□□ 0.05
CHD4-210ENST00000544040 TSHRP16473 764 aa15.37■□□□□ 0.05
CHD4-210ENST00000544040 CHST15Q7LFX5 561 aaPredicted RBP15.37■□□□□ 0.05
CHD4-210ENST00000544040 OTOP3Q7RTS5 596 aa15.37■□□□□ 0.05
CHD4-210ENST00000544040 FAM71AQ8IYT1 594 aa15.37■□□□□ 0.05
CHD4-210ENST00000544040 TWIST2Q8WVJ9 160 aa15.37■□□□□ 0.05
CHD4-210ENST00000544040 AP2M1Q96CW1 435 aa15.37■□□□□ 0.05
CHD4-210ENST00000544040 DNAJC11Q9NVH1 559 aa15.37■□□□□ 0.05
CHD4-210ENST00000544040 ZSCAN5BA6NJL1 495 aa15.37■□□□□ 0.05
CHD4-210ENST00000544040 TXNL4AP83876 142 aaKnown RBP15.37■□□□□ 0.05
CHD4-210ENST00000544040 LIPEQ05469 1076 aa15.37■□□□□ 0.05
CHD4-210ENST00000544040 HECTD2Q5U5R9 776 aa15.37■□□□□ 0.05
CHD4-210ENST00000544040 RHBDF2Q6PJF5 856 aa15.37■□□□□ 0.05
CHD4-210ENST00000544040 LDB1Q86U70 411 aaPredicted RBP15.37■□□□□ 0.05
CHD4-210ENST00000544040 ADAMTS15Q8TE58 950 aa15.37■□□□□ 0.05
CHD4-210ENST00000544040 C18orf25Q96B23 403 aaPredicted RBP15.37■□□□□ 0.05
CHD4-210ENST00000544040 FAM84AQ96KN4 292 aa15.37■□□□□ 0.05
CHD4-210ENST00000544040 LRRC4CQ9HCJ2 640 aa15.37■□□□□ 0.05
CHD4-210ENST00000544040 PSMA1P25786 263 aaKnown RBP15.37■□□□□ 0.05
CHD4-210ENST00000544040 USP41Q3LFD5 358 aa15.37■□□□□ 0.05
CHD4-210ENST00000544040 MFSD1Q9H3U5 465 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms