RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 PANX3Q96QZ0 392 aa16.97■□□□□ 0.31
PTPRO-209ENST00000543886 ZFYVE1Q9HBF4 777 aa16.97■□□□□ 0.31
PTPRO-209ENST00000543886 ZBTB26Q9HCK0 441 aa16.97■□□□□ 0.31
PTPRO-209ENST00000543886 MRGBPQ9NV56 204 aa16.97■□□□□ 0.31
PTPRO-209ENST00000543886 CXXC1Q9P0U4 656 aaPredicted RBP16.97■□□□□ 0.31
PTPRO-209ENST00000543886 STOML1Q9UBI4 398 aa16.97■□□□□ 0.31
PTPRO-209ENST00000543886 LZTS1Q9Y250 596 aa16.97■□□□□ 0.31
PTPRO-209ENST00000543886 A0A0J9YYE9 177 aa16.96■□□□□ 0.31
PTPRO-209ENST00000543886 TRBC1P01850 177 aa16.96■□□□□ 0.31
PTPRO-209ENST00000543886 MTHFD2P13995 350 aa16.96■□□□□ 0.31
PTPRO-209ENST00000543886 CHRM3P20309 590 aa16.96■□□□□ 0.31
PTPRO-209ENST00000543886 CD9P21926 228 aa16.96■□□□□ 0.31
PTPRO-209ENST00000543886 DDX6P26196 483 aaKnown RBP eCLIP16.96■□□□□ 0.31
PTPRO-209ENST00000543886 SERPINA4P29622 427 aa16.96■□□□□ 0.31
PTPRO-209ENST00000543886 GKP32189 559 aa16.96■□□□□ 0.31
PTPRO-209ENST00000543886 NUDT2P50583 147 aa16.96■□□□□ 0.31
PTPRO-209ENST00000543886 ADARP55265 1226 aaKnown RBP16.96■□□□□ 0.31
PTPRO-209ENST00000543886 ACTR3P61158 418 aa16.96■□□□□ 0.31
PTPRO-209ENST00000543886 HERC3Q15034 1050 aa16.96■□□□□ 0.31
PTPRO-209ENST00000543886 TSNQ15631 228 aaKnown RBP16.96■□□□□ 0.31
PTPRO-209ENST00000543886 ARHGAP15Q53QZ3 475 aa16.96■□□□□ 0.31
PTPRO-209ENST00000543886 PITRM1Q5JRX3 1037 aa16.96■□□□□ 0.31
PTPRO-209ENST00000543886 CERS6Q6ZMG9 384 aa16.96■□□□□ 0.31
PTPRO-209ENST00000543886 FBXO39Q8N4B4 442 aa16.96■□□□□ 0.31
PTPRO-209ENST00000543886 KCNJ9Q92806 393 aa16.96■□□□□ 0.31
PTPRO-209ENST00000543886 RAD9AQ99638 391 aa16.96■□□□□ 0.31
PTPRO-209ENST00000543886 TMEM106CQ9BVX2 250 aa16.96■□□□□ 0.31
PTPRO-209ENST00000543886 INTS6Q9UL03 887 aaKnown RBP16.96■□□□□ 0.31
PTPRO-209ENST00000543886 CCL26Q9Y258 94 aa16.96■□□□□ 0.31
PTPRO-209ENST00000543886 COPG1Q9Y678 874 aaKnown RBP16.96■□□□□ 0.31
PTPRO-209ENST00000543886 NPEPPSL1A6NEC2 478 aa16.95■□□□□ 0.3
PTPRO-209ENST00000543886 GOLGA8CPA6NN73 597 aa16.95■□□□□ 0.3
PTPRO-209ENST00000543886 BTN3A1O00481 513 aa16.95■□□□□ 0.3
PTPRO-209ENST00000543886 AIM2O14862 343 aa16.95■□□□□ 0.3
PTPRO-209ENST00000543886 SIX3O95343 332 aaPredicted RBP16.95■□□□□ 0.3
PTPRO-209ENST00000543886 CCNG1P51959 295 aa16.95■□□□□ 0.3
PTPRO-209ENST00000543886 INHBCP55103 352 aa16.95■□□□□ 0.3
PTPRO-209ENST00000543886 CDH13P55290 713 aa16.95■□□□□ 0.3
PTPRO-209ENST00000543886 IL2P60568 153 aa16.95■□□□□ 0.3
PTPRO-209ENST00000543886 C1QTNF8P60827 252 aa16.95■□□□□ 0.3
PTPRO-209ENST00000543886 SNRPD1P62314 119 aaKnown RBP16.95■□□□□ 0.3
PTPRO-209ENST00000543886 TBL3Q12788 808 aaKnown RBP16.95■□□□□ 0.3
PTPRO-209ENST00000543886 CLEC6AQ6EIG7 209 aa16.95■□□□□ 0.3
PTPRO-209ENST00000543886 UGT3A1Q6NUS8 523 aa16.95■□□□□ 0.3
PTPRO-209ENST00000543886 FAM151BQ6UXP7 276 aa16.95■□□□□ 0.3
PTPRO-209ENST00000543886 OR2AP1Q8NGE2 309 aa16.95■□□□□ 0.3
PTPRO-209ENST00000543886 BADQ92934 168 aa16.95■□□□□ 0.3
PTPRO-209ENST00000543886 EID2BQ96D98 161 aa16.95■□□□□ 0.3
PTPRO-209ENST00000543886 RPL10LQ96L21 214 aaKnown RBP16.95■□□□□ 0.3
PTPRO-209ENST00000543886 GALPQ9UBC7 116 aa16.95■□□□□ 0.3
PTPRO-209ENST00000543886 CDH22Q9UJ99 828 aa16.95■□□□□ 0.3
PTPRO-209ENST00000543886 GPR39O43194 453 aa16.95■□□□□ 0.3
PTPRO-209ENST00000543886 TLL1O43897 1013 aa16.95■□□□□ 0.3
PTPRO-209ENST00000543886 CCNT2O60583 730 aaKnown RBP16.95■□□□□ 0.3
PTPRO-209ENST00000543886 ECI2O75521 394 aa16.95■□□□□ 0.3
PTPRO-209ENST00000543886 PRAMEF1O95521 474 aa16.95■□□□□ 0.3
PTPRO-209ENST00000543886 BMPR1AP36894 532 aa16.95■□□□□ 0.3
PTPRO-209ENST00000543886 PTDSS1P48651 473 aaKnown RBP16.95■□□□□ 0.3
PTPRO-209ENST00000543886 SESN3P58005 492 aa16.95■□□□□ 0.3
PTPRO-209ENST00000543886 TEAD2Q15562 447 aa16.95■□□□□ 0.3
PTPRO-209ENST00000543886 GEN1Q17RS7 908 aa16.95■□□□□ 0.3
PTPRO-209ENST00000543886 DGKKQ5KSL6 1271 aa16.95■□□□□ 0.3
PTPRO-209ENST00000543886 C16orf89Q6UX73 402 aa16.95■□□□□ 0.3
PTPRO-209ENST00000543886 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.95■□□□□ 0.3
PTPRO-209ENST00000543886 PELI3Q8N2H9 469 aa16.95■□□□□ 0.3
PTPRO-209ENST00000543886 CD200R1Q8TD46 325 aa16.95■□□□□ 0.3
PTPRO-209ENST00000543886 TCEAL4Q96EI5 215 aa16.95■□□□□ 0.3
PTPRO-209ENST00000543886 LINGO1Q96FE5 620 aa16.95■□□□□ 0.3
PTPRO-209ENST00000543886 TTC1Q99614 292 aa16.95■□□□□ 0.3
PTPRO-209ENST00000543886 SLC30A3Q99726 388 aa16.95■□□□□ 0.3
PTPRO-209ENST00000543886 SARS2Q9NP81 518 aaKnown RBP16.95■□□□□ 0.3
PTPRO-209ENST00000543886 PCDHB1Q9Y5F3 818 aa16.95■□□□□ 0.3
PTPRO-209ENST00000543886 KIAA0100Q14667 2235 aaKnown RBP16.94■□□□□ 0.3
PTPRO-209ENST00000543886 CXorf51AA0A1B0GTR3 108 aa16.94■□□□□ 0.3
PTPRO-209ENST00000543886 CCDC189A1A4V9 331 aa16.94■□□□□ 0.3
PTPRO-209ENST00000543886 CAPN8A6NHC0 703 aa16.94■□□□□ 0.3
PTPRO-209ENST00000543886 CDC7O00311 574 aa16.94■□□□□ 0.3
PTPRO-209ENST00000543886 ZNF821O75541 412 aaPredicted RBP16.94■□□□□ 0.3
PTPRO-209ENST00000543886 PDE5AO76074 875 aa16.94■□□□□ 0.3
PTPRO-209ENST00000543886 SRCP12931 536 aa16.94■□□□□ 0.3
PTPRO-209ENST00000543886 PTPN2P17706 415 aa16.94■□□□□ 0.3
PTPRO-209ENST00000543886 EEF1DP29692 281 aaKnown RBP16.94■□□□□ 0.3
PTPRO-209ENST00000543886 HNF1BP35680 557 aa16.94■□□□□ 0.3
PTPRO-209ENST00000543886 CTSOP43234 321 aaPredicted RBP16.94■□□□□ 0.3
PTPRO-209ENST00000543886 STK19P49842 368 aaPredicted RBP16.94■□□□□ 0.3
PTPRO-209ENST00000543886 CLYBLQ8N0X4 340 aa16.94■□□□□ 0.3
PTPRO-209ENST00000543886 SP7Q8TDD2 431 aaPredicted RBP16.94■□□□□ 0.3
PTPRO-209ENST00000543886 MICAL1Q8TDZ2 1067 aa16.94■□□□□ 0.3
PTPRO-209ENST00000543886 FUBP1Q96AE4 644 aaKnown RBP16.94■□□□□ 0.3
PTPRO-209ENST00000543886 P2RY12Q9H244 342 aa16.94■□□□□ 0.3
PTPRO-209ENST00000543886 MID1IP1Q9NPA3 183 aa16.94■□□□□ 0.3
PTPRO-209ENST00000543886 BATF3Q9NR55 127 aa16.94■□□□□ 0.3
PTPRO-209ENST00000543886 TLR9Q9NR96 1032 aa16.94■□□□□ 0.3
PTPRO-209ENST00000543886 STX18Q9P2W9 335 aaKnown RBP16.94■□□□□ 0.3
PTPRO-209ENST00000543886 SLC25A13Q9UJS0 675 aa16.94■□□□□ 0.3
PTPRO-209ENST00000543886 IKZF3Q9UKT9 509 aa16.94■□□□□ 0.3
PTPRO-209ENST00000543886 PRMT5O14744 637 aaPredicted RBP16.93■□□□□ 0.3
PTPRO-209ENST00000543886 UBDO15205 165 aa16.93■□□□□ 0.3
PTPRO-209ENST00000543886 GRM6O15303 877 aa16.93■□□□□ 0.3
PTPRO-209ENST00000543886 CLASP2O75122 1294 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms