RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 PRRX1P54821 245 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 EIF3BP55884 814 aaKnown RBP8.86□□□□□ -0.99
VPS13D-212ENST00000543766 PSMC6P62333 389 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 ATP2C1P98194 919 aaPredicted RBP8.86□□□□□ -0.99
VPS13D-212ENST00000543766 BNC1Q01954 994 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 CYP27A1Q02318 531 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 ELP6Q0PNE2 266 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 PRKAA1Q13131 559 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 DYRK1AQ13627 763 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 KRT81Q14533 505 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 POU6F1Q14863 301 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 OCLNQ16625 522 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 ERFEQ4G0M1 354 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 WASHC2DQ5SRD0 308 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 STEAP3Q658P3 488 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 CENPPQ6IPU0 288 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 AMIGO1Q86WK6 493 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 CPSF7Q8N684 471 aaKnown RBP8.86□□□□□ -0.99
VPS13D-212ENST00000543766 RAB24Q969Q5 203 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 C11orf24Q96F05 449 aaPredicted RBP8.86□□□□□ -0.99
VPS13D-212ENST00000543766 KLC2Q9H0B6 622 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 WDR55Q9H6Y2 383 aaPredicted RBP8.86□□□□□ -0.99
VPS13D-212ENST00000543766 CERS4Q9HA82 394 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 POLLQ9UGP5 575 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 CNOT11Q9UKZ1 510 aaKnown RBP8.86□□□□□ -0.99
VPS13D-212ENST00000543766 PCDHGA5Q9Y5G8 931 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 XDHP47989 1333 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 SPATA31A3Q5VYP0 1347 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 KLF18A0A0U1RQI7 1052 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 PI4KAP2A4QPH2 592 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 H0YIV9 168 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 UGT1A9O60656 530 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 CDH16O75309 829 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 TOM1L1O75674 476 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 DGAT1O75907 488 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 IGHEP01854 428 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 ENO3P13929 434 aaPredicted RBP8.86□□□□□ -0.99
VPS13D-212ENST00000543766 HOXA11P31270 313 aaPredicted RBP8.86□□□□□ -0.99
VPS13D-212ENST00000543766 NT5C2P49902 561 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 NME5P56597 212 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 UBE2IP63279 158 aaKnown RBP8.86□□□□□ -0.99
VPS13D-212ENST00000543766 TNNC1P63316 161 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 TEFQ10587 303 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 NR1H3Q13133 447 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 LDLRAP1Q5SW96 308 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 KCTD11Q693B1 232 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 LMBR1LQ6UX01 489 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 COL23A1Q86Y22 540 aaPredicted RBP8.86□□□□□ -0.99
VPS13D-212ENST00000543766 PI4KAP1Q8N8J0 262 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 RDH13Q8NBN7 331 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 OR7D4Q8NG98 312 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 ZFP42Q96MM3 310 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 FCRL4Q96PJ5 515 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 NAT9Q9BTE0 207 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 TRAF4Q9BUZ4 470 aaPredicted RBP8.86□□□□□ -0.99
VPS13D-212ENST00000543766 ZNF700Q9H0M5 742 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 CHODLQ9H9P2 273 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 UGT1A7Q9HAW7 530 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 UGT1A10Q9HAW8 530 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 UGT1A8Q9HAW9 530 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 ZFP14Q9HCL3 533 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 RASSF1Q9NS23 344 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 SLC35D1Q9NTN3 355 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 FAM217BQ9NTX9 383 aaPredicted RBP8.86□□□□□ -0.99
VPS13D-212ENST00000543766 KLHL20Q9Y2M5 609 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 PCDHA3Q9Y5H8 950 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 SLIT2O94813 1529 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 OR2AT4A6NND4 320 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 EIF3DO15371 548 aaKnown RBP eCLIP8.86□□□□□ -0.99
VPS13D-212ENST00000543766 POP7O75817 140 aaKnown RBP8.86□□□□□ -0.99
VPS13D-212ENST00000543766 XRCC1P18887 633 aaPredicted RBP8.86□□□□□ -0.99
VPS13D-212ENST00000543766 HLA-DPA1P20036 260 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 PTNP21246 168 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 ARNTP27540 789 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 PHKA2P46019 1235 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 ALDH7A1P49419 539 aaKnown RBP8.86□□□□□ -0.99
VPS13D-212ENST00000543766 ACOT2P49753 483 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 MBTD1Q05BQ5 628 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 ACVR2BQ13705 512 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 ZNF829Q3KNS6 432 aaPredicted RBP8.86□□□□□ -0.99
VPS13D-212ENST00000543766 HSDL1Q3SXM5 330 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 HERC4Q5GLZ8 1057 aaPredicted RBP8.86□□□□□ -0.99
VPS13D-212ENST00000543766 C6orf10Q5SRN2 563 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 LPCAT4Q643R3 524 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 RNF43Q68DV7 783 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 CGB2Q6NT52 195 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 GPR155Q7Z3F1 870 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 HAUS6Q7Z4H7 955 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 GPR180Q86V85 440 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 PIGKQ92643 395 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 DMRTB1Q96MA1 342 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 KRT12Q99456 494 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 KLHL31Q9H511 634 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 DHX33Q9H6R0 707 aaKnown RBP8.86□□□□□ -0.99
VPS13D-212ENST00000543766 DDX31Q9H8H2 851 aaKnown RBP8.86□□□□□ -0.99
VPS13D-212ENST00000543766 GSN-AS1Q9NRJ2 163 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 NUDT15Q9NV35 164 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 ARHGAP20Q9P2F6 1191 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 STARD10Q9Y365 291 aa8.86□□□□□ -0.99
VPS13D-212ENST00000543766 DHRS7Q9Y394 339 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms