RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 OSCP1Q8WVF1 389 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 SGCDQ92629 289 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 GLG1Q92896 1179 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 CCDC127Q96BQ5 260 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 REPS1Q96D71 796 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 CFAP36Q96G28 342 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 CEP295NLQ96MC4 621 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 CDRT15Q96T59 188 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 MYD88Q99836 296 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 PRMT1Q99873 361 aaKnown RBP5.91□□□□□ -1.46
XRCC4-206ENST00000542685 ERP44Q9BS26 406 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 BTBD10Q9BSF8 475 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 C1QTNF7Q9BXJ2 289 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 CDH19Q9H159 772 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 CUEDC2Q9H467 287 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 EHD1Q9H4M9 534 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 MAGEF1Q9HAY2 307 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 LY9Q9HBG7 655 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 ZNF287Q9HBT7 754 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 GLOD4Q9HC38 313 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 XAB2Q9HCS7 855 aaKnown RBP5.91□□□□□ -1.46
XRCC4-206ENST00000542685 UBN1Q9NPG3 1134 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 SEPT11Q9NVA2 429 aaKnown RBP5.91□□□□□ -1.46
XRCC4-206ENST00000542685 RRN3Q9NYV6 651 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 STMN3Q9NZ72 180 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 CLIC5Q9NZA1 410 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 EHD2Q9NZN4 543 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 KIF17Q9P2E2 1029 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 MYH4Q9Y623 1939 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 TNS3Q68CZ2 1445 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 EIF4E1BA6NMX2 242 aaKnown RBP5.9□□□□□ -1.46
XRCC4-206ENST00000542685 EVPLLA8MZ36 301 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 hCG_1984214I3L0E3 225 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 ACOX3O15254 700 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 POLR2DO15514 142 aaKnown RBP5.9□□□□□ -1.46
XRCC4-206ENST00000542685 RANBP6O60518 1105 aaKnown RBP5.9□□□□□ -1.46
XRCC4-206ENST00000542685 TBX10O75333 385 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 ONECUT2O95948 504 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 ZCCHC18P0CG32 403 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 SMIM18P0DKX4 95 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 PPIFP30405 207 aaKnown RBP5.9□□□□□ -1.46
XRCC4-206ENST00000542685 PRKAR1BP31321 381 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 HSPA1LP34931 641 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 PIK3CAP42336 1068 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 CBX5P45973 191 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 TUFMP49411 452 aaKnown RBP5.9□□□□□ -1.46
XRCC4-206ENST00000542685 CCR3P51677 355 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 STX1BP61266 288 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 ECT2LQ008S8 904 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 RAD51Q06609 339 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 KRT31Q15323 416 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 ZC2HC1CQ53FD0 456 aaPredicted RBP5.9□□□□□ -1.46
XRCC4-206ENST00000542685 ATAT1Q5SQI0 421 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 ODR4Q5SWX8 454 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 PRAMEF17Q5VTA0 474 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 AGAP7PQ5VUJ5 663 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 ARL6IP4Q66PJ3 421 aaKnown RBP5.9□□□□□ -1.46
XRCC4-206ENST00000542685 ZNF626Q68DY1 528 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 FAM171BQ6P995 826 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 UGT2A3Q6UWM9 527 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 ZNF66Q6ZN08 573 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 COPS6Q7L5N1 327 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 WDR53Q7Z5U6 358 aaPredicted RBP5.9□□□□□ -1.46
XRCC4-206ENST00000542685 GPR141Q7Z602 305 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 SATL1Q86VE3 508 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 ZNF410Q86VK4 478 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 ECHDC2Q86YB7 292 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 ZNF34Q8IZ26 560 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 GRPEL2Q8TAA5 225 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 ZNF420Q8TAQ5 688 aaPredicted RBP5.9□□□□□ -1.46
XRCC4-206ENST00000542685 SLC2A14Q8TDB8 520 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 SCFD2Q8WU76 684 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 TRUB1Q8WWH5 349 aaKnown RBP5.9□□□□□ -1.46
XRCC4-206ENST00000542685 PRPF31Q8WWY3 499 aaKnown RBP5.9□□□□□ -1.46
XRCC4-206ENST00000542685 ZNF75CPQ92670 426 aaPredicted RBP5.9□□□□□ -1.46
XRCC4-206ENST00000542685 MCUR1Q96AQ8 359 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 R3HDM4Q96D70 268 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 C1GALT1C1Q96EU7 318 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 RPRD1AQ96P16 312 aaPredicted RBP5.9□□□□□ -1.46
XRCC4-206ENST00000542685 SERPINB12Q96P63 405 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 MOGAT1Q96PD6 335 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 FMO2Q99518 471 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 CIB1Q99828 191 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 FERMT1Q9BQL6 677 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 MYLK2Q9H1R3 596 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 NHEJ1Q9H9Q4 299 aaPredicted RBP5.9□□□□□ -1.46
XRCC4-206ENST00000542685 RIC8AQ9NPQ8 531 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 CNNM1Q9NRU3 951 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 DUSP22Q9NRW4 184 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 XPR1Q9UBH6 696 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 CCNL1Q9UK58 526 aaPredicted RBP5.9□□□□□ -1.46
XRCC4-206ENST00000542685 NDRG4Q9ULP0 352 aaKnown RBP5.9□□□□□ -1.46
XRCC4-206ENST00000542685 RAB26Q9ULW5 256 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 PCDHA12Q9UN75 941 aa5.9□□□□□ -1.46
XRCC4-206ENST00000542685 MRPS17Q9Y2R5 130 aaKnown RBP5.9□□□□□ -1.46
XRCC4-206ENST00000542685 TDRKHQ9Y2W6 561 aaKnown RBP5.9□□□□□ -1.46
XRCC4-206ENST00000542685 TNRC6CQ9HCJ0 1690 aaKnown RBP5.9□□□□□ -1.47
XRCC4-206ENST00000542685 ADGRA3Q8IWK6 1321 aa5.9□□□□□ -1.47
XRCC4-206ENST00000542685 TOGARAM1Q9Y4F4 1720 aa5.9□□□□□ -1.47
XRCC4-206ENST00000542685 RTL9Q8NET4 1388 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms