RNA–Protein interactions for RNA: ENST00000542145.5

RAP1B-228, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAP1B, Length 1,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-228ENST00000542145 C9orf72Q96LT7 481 aa17.73■□□□□ 0.43
RAP1B-228ENST00000542145 KCTD15Q96SI1 283 aaPredicted RBP17.73■□□□□ 0.43
RAP1B-228ENST00000542145 STN1Q9H668 368 aaKnown RBP17.73■□□□□ 0.43
RAP1B-228ENST00000542145 CNOT8Q9UFF9 292 aaKnown RBP17.73■□□□□ 0.43
RAP1B-228ENST00000542145 KCND3Q9UK17 655 aa17.73■□□□□ 0.43
RAP1B-228ENST00000542145 KCNK6Q9Y257 313 aa17.73■□□□□ 0.43
RAP1B-228ENST00000542145 PPIL1Q9Y3C6 166 aa17.73■□□□□ 0.43
RAP1B-228ENST00000542145 ABCA12Q86UK0 2595 aa17.72■□□□□ 0.43
RAP1B-228ENST00000542145 EPHB6O15197 1021 aa17.72■□□□□ 0.43
RAP1B-228ENST00000542145 PGLSO95336 258 aa17.72■□□□□ 0.43
RAP1B-228ENST00000542145 PEX11BO96011 259 aa17.72■□□□□ 0.43
RAP1B-228ENST00000542145 ATP1A1P05023 1023 aaKnown RBP17.72■□□□□ 0.43
RAP1B-228ENST00000542145 DCTP40126 519 aa17.72■□□□□ 0.43
RAP1B-228ENST00000542145 PTSQ03393 145 aa17.72■□□□□ 0.43
RAP1B-228ENST00000542145 ZNF235Q14590 738 aa17.72■□□□□ 0.43
RAP1B-228ENST00000542145 EIF2S3LQ2VIR3 472 aaKnown RBP17.72■□□□□ 0.43
RAP1B-228ENST00000542145 ERMARDQ5T6L9 678 aa17.72■□□□□ 0.43
RAP1B-228ENST00000542145 LYSMD3Q7Z3D4 306 aa17.72■□□□□ 0.43
RAP1B-228ENST00000542145 ARFGAP1Q8N6T3 406 aa17.72■□□□□ 0.43
RAP1B-228ENST00000542145 PIH1D2Q8WWB5 315 aa17.72■□□□□ 0.43
RAP1B-228ENST00000542145 STAMBPL1Q96FJ0 436 aa17.72■□□□□ 0.43
RAP1B-228ENST00000542145 ELMO2Q96JJ3 720 aa17.72■□□□□ 0.43
RAP1B-228ENST00000542145 ZNF599Q96NL3 588 aa17.72■□□□□ 0.43
RAP1B-228ENST00000542145 OR6C1Q96RD1 312 aa17.72■□□□□ 0.43
RAP1B-228ENST00000542145 PEBP4Q96S96 227 aa17.72■□□□□ 0.43
RAP1B-228ENST00000542145 SNRNP25Q9BV90 132 aaKnown RBP17.72■□□□□ 0.43
RAP1B-228ENST00000542145 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.72■□□□□ 0.43
RAP1B-228ENST00000542145 CASS4Q9NQ75 786 aa17.72■□□□□ 0.43
RAP1B-228ENST00000542145 SAMSN1Q9NSI8 373 aaKnown RBP17.72■□□□□ 0.43
RAP1B-228ENST00000542145 OGFRQ9NZT2 677 aa17.72■□□□□ 0.43
RAP1B-228ENST00000542145 RCOR3Q9P2K3 495 aaPredicted RBP17.72■□□□□ 0.43
RAP1B-228ENST00000542145 CPNE7Q9UBL6 633 aa17.72■□□□□ 0.43
RAP1B-228ENST00000542145 PCDHGA6Q9Y5G7 932 aa17.72■□□□□ 0.43
RAP1B-228ENST00000542145 SNX2O60749 519 aa17.71■□□□□ 0.43
RAP1B-228ENST00000542145 NDUFA10O95299 355 aa17.71■□□□□ 0.43
RAP1B-228ENST00000542145 CLDN1O95832 211 aa17.71■□□□□ 0.43
RAP1B-228ENST00000542145 DDAH2O95865 285 aa17.71■□□□□ 0.43
RAP1B-228ENST00000542145 RECKO95980 971 aa17.71■□□□□ 0.43
RAP1B-228ENST00000542145 C9P02748 559 aa17.71■□□□□ 0.43
RAP1B-228ENST00000542145 PDHA1P08559 390 aa17.71■□□□□ 0.43
RAP1B-228ENST00000542145 SEPHS1P49903 392 aa17.71■□□□□ 0.43
RAP1B-228ENST00000542145 MAXP61244 160 aa17.71■□□□□ 0.43
RAP1B-228ENST00000542145 DNASE1L3Q13609 305 aa17.71■□□□□ 0.43
RAP1B-228ENST00000542145 ARMC12Q5T9G4 340 aa17.71■□□□□ 0.43
RAP1B-228ENST00000542145 LRRC66Q68CR7 880 aa17.71■□□□□ 0.43
RAP1B-228ENST00000542145 DCUN1D2Q6PH85 259 aa17.71■□□□□ 0.43
RAP1B-228ENST00000542145 USP45Q70EL2 814 aa17.71■□□□□ 0.43
RAP1B-228ENST00000542145 NLRP8Q86W28 1048 aa17.71■□□□□ 0.43
RAP1B-228ENST00000542145 RASGRP3Q8IV61 690 aa17.71■□□□□ 0.43
RAP1B-228ENST00000542145 EXD1Q8NHP7 514 aa17.71■□□□□ 0.43
RAP1B-228ENST00000542145 HERPUD2Q9BSE4 406 aa17.71■□□□□ 0.43
RAP1B-228ENST00000542145 RIOK2Q9BVS4 552 aaKnown RBP17.71■□□□□ 0.43
RAP1B-228ENST00000542145 EPB41L1Q9H4G0 881 aa17.71■□□□□ 0.43
RAP1B-228ENST00000542145 FAM207AQ9NSI2 230 aaPredicted RBP17.71■□□□□ 0.43
RAP1B-228ENST00000542145 PCSK1NQ9UHG2 260 aa17.71■□□□□ 0.43
RAP1B-228ENST00000542145 ANKRD17O75179 2603 aaKnown RBP17.7■□□□□ 0.42
RAP1B-228ENST00000542145 TCP11X1B4DZS4 312 aa17.7■□□□□ 0.42
RAP1B-228ENST00000542145 EIF3CLB5ME19 914 aaKnown RBP17.7■□□□□ 0.42
RAP1B-228ENST00000542145 SORBS2O94875 1100 aaKnown RBP17.7■□□□□ 0.42
RAP1B-228ENST00000542145 ACP5P13686 325 aa17.7■□□□□ 0.42
RAP1B-228ENST00000542145 F3P13726 295 aa17.7■□□□□ 0.42
RAP1B-228ENST00000542145 HSPA9P38646 679 aaKnown RBP17.7■□□□□ 0.42
RAP1B-228ENST00000542145 MRPL49Q13405 166 aaKnown RBP17.7■□□□□ 0.42
RAP1B-228ENST00000542145 IL11RAQ14626 422 aa17.7■□□□□ 0.42
RAP1B-228ENST00000542145 PPP6R3Q5H9R7 873 aaPredicted RBP17.7■□□□□ 0.42
RAP1B-228ENST00000542145 ZNF765Q7L2R6 523 aa17.7■□□□□ 0.42
RAP1B-228ENST00000542145 MAMDC2Q7Z304 686 aaPredicted RBP17.7■□□□□ 0.42
RAP1B-228ENST00000542145 CT55Q8WUE5 264 aa17.7■□□□□ 0.42
RAP1B-228ENST00000542145 EIF3CQ99613 913 aaKnown RBP17.7■□□□□ 0.42
RAP1B-228ENST00000542145 MGME1Q9BQP7 344 aa17.7■□□□□ 0.42
RAP1B-228ENST00000542145 SEPT11Q9NVA2 429 aaKnown RBP17.7■□□□□ 0.42
RAP1B-228ENST00000542145 TAB2Q9NYJ8 693 aa17.7■□□□□ 0.42
RAP1B-228ENST00000542145 LNPEPQ9UIQ6 1025 aa17.7■□□□□ 0.42
RAP1B-228ENST00000542145 PADI1Q9ULC6 663 aa17.7■□□□□ 0.42
RAP1B-228ENST00000542145 CNOT6Q9ULM6 557 aaKnown RBP17.7■□□□□ 0.42
RAP1B-228ENST00000542145 KIR2DS5A0A0G2JLQ3 304 aa17.69■□□□□ 0.42
RAP1B-228ENST00000542145 A0A0G2JNG1 304 aa17.69■□□□□ 0.42
RAP1B-228ENST00000542145 GOLGA6L3A6NEY3 463 aa17.69■□□□□ 0.42
RAP1B-228ENST00000542145 LILRA5A6NI73 299 aa17.69■□□□□ 0.42
RAP1B-228ENST00000542145 KIR2DS3K7RE56 304 aa17.69■□□□□ 0.42
RAP1B-228ENST00000542145 SPAG6O75602 509 aa17.69■□□□□ 0.42
RAP1B-228ENST00000542145 PYGLP06737 847 aa17.69■□□□□ 0.42
RAP1B-228ENST00000542145 CCNYL3P0C7X3 344 aa17.69■□□□□ 0.42
RAP1B-228ENST00000542145 TYRP1P17643 537 aa17.69■□□□□ 0.42
RAP1B-228ENST00000542145 CASP14P31944 242 aa17.69■□□□□ 0.42
RAP1B-228ENST00000542145 GARSP41250 739 aaKnown RBP17.69■□□□□ 0.42
RAP1B-228ENST00000542145 PGDP52209 483 aa17.69■□□□□ 0.42
RAP1B-228ENST00000542145 KIR2DS5Q14953 304 aa17.69■□□□□ 0.42
RAP1B-228ENST00000542145 INPP5JQ15735 1006 aaPredicted RBP17.69■□□□□ 0.42
RAP1B-228ENST00000542145 PRR30Q53SZ7 412 aaPredicted RBP17.69■□□□□ 0.42
RAP1B-228ENST00000542145 TCP11X2Q5H9J9 407 aa17.69■□□□□ 0.42
RAP1B-228ENST00000542145 CPZQ66K79 652 aa17.69■□□□□ 0.42
RAP1B-228ENST00000542145 CYP4V2Q6ZWL3 525 aaPredicted RBP17.69■□□□□ 0.42
RAP1B-228ENST00000542145 TGM7Q96PF1 710 aa17.69■□□□□ 0.42
RAP1B-228ENST00000542145 PLEKHG4BQ96PX9 1271 aa17.69■□□□□ 0.42
RAP1B-228ENST00000542145 RUFY1Q96T51 708 aa17.69■□□□□ 0.42
RAP1B-228ENST00000542145 MLXIPLQ9NP71 852 aa17.69■□□□□ 0.42
RAP1B-228ENST00000542145 CWC15Q9P013 229 aaKnown RBP17.69■□□□□ 0.42
RAP1B-228ENST00000542145 VPS18Q9P253 973 aa17.69■□□□□ 0.42
RAP1B-228ENST00000542145 SLC30A1Q9Y6M5 507 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms