RNA–Protein interactions for RNA: ENST00000541371.5

PRPF19-206, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 3

Gene PRPF19, Length 943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-206ENST00000541371 VPS18Q9P253 973 aa13.12□□□□□ -0.31
PRPF19-206ENST00000541371 RPL26L1Q9UNX3 145 aaKnown RBP13.12□□□□□ -0.31
PRPF19-206ENST00000541371 PRKAB1Q9Y478 270 aa13.12□□□□□ -0.31
PRPF19-206ENST00000541371 ATMQ13315 3056 aa13.11□□□□□ -0.31
PRPF19-206ENST00000541371 A0A087X0T9 212 aa13.11□□□□□ -0.31
PRPF19-206ENST00000541371 C1orf232A0A0U1RR37 186 aa13.11□□□□□ -0.31
PRPF19-206ENST00000541371 A0A1W2PQJ5 194 aa13.11□□□□□ -0.31
PRPF19-206ENST00000541371 ARHGAP6O43182 974 aa13.11□□□□□ -0.31
PRPF19-206ENST00000541371 SUV39H1O43463 412 aa13.11□□□□□ -0.31
PRPF19-206ENST00000541371 RAD1O60671 282 aa13.11□□□□□ -0.31
PRPF19-206ENST00000541371 SNX2O60749 519 aa13.11□□□□□ -0.31
PRPF19-206ENST00000541371 DNAJC6O75061 913 aa13.11□□□□□ -0.31
PRPF19-206ENST00000541371 EML2O95834 649 aa13.11□□□□□ -0.31
PRPF19-206ENST00000541371 PRLP01236 227 aa13.11□□□□□ -0.31
PRPF19-206ENST00000541371 FAM228BP0C875 321 aa13.11□□□□□ -0.31
PRPF19-206ENST00000541371 SLC2A4P14672 509 aa13.11□□□□□ -0.31
PRPF19-206ENST00000541371 LIFP15018 202 aa13.11□□□□□ -0.31
PRPF19-206ENST00000541371 MX2P20592 715 aa13.11□□□□□ -0.31
PRPF19-206ENST00000541371 MAN1A1P33908 653 aa13.11□□□□□ -0.31
PRPF19-206ENST00000541371 ARSEP51690 589 aa13.11□□□□□ -0.31
PRPF19-206ENST00000541371 TPM4P67936 248 aa13.11□□□□□ -0.31
PRPF19-206ENST00000541371 NFATC2Q13469 925 aa13.11□□□□□ -0.31
PRPF19-206ENST00000541371 IHHQ14623 411 aa13.11□□□□□ -0.31
PRPF19-206ENST00000541371 PDK2Q15119 407 aa13.11□□□□□ -0.31
PRPF19-206ENST00000541371 ATP13A4Q4VNC1 1196 aa13.11□□□□□ -0.31
PRPF19-206ENST00000541371 ANKRD20A8PQ5CZ79 823 aa13.11□□□□□ -0.31
PRPF19-206ENST00000541371 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.11□□□□□ -0.31
PRPF19-206ENST00000541371 ZFYVE27Q5T4F4 411 aa13.11□□□□□ -0.31
PRPF19-206ENST00000541371 ANKS6Q68DC2 871 aa13.11□□□□□ -0.31
PRPF19-206ENST00000541371 ALKBH5Q6P6C2 394 aaKnown RBP13.11□□□□□ -0.31
PRPF19-206ENST00000541371 WDR74Q6RFH5 385 aaPredicted RBP13.11□□□□□ -0.31
PRPF19-206ENST00000541371 MAP7D3Q8IWC1 876 aa13.11□□□□□ -0.31
PRPF19-206ENST00000541371 CCNYQ8ND76 341 aa13.11□□□□□ -0.31
PRPF19-206ENST00000541371 ARRDC2Q8TBH0 407 aa13.11□□□□□ -0.31
PRPF19-206ENST00000541371 CCHCR1Q8TD31 782 aa13.11□□□□□ -0.31
PRPF19-206ENST00000541371 CPLX3Q8WVH0 158 aa13.11□□□□□ -0.31
PRPF19-206ENST00000541371 NCSTNQ92542 709 aa13.11□□□□□ -0.31
PRPF19-206ENST00000541371 FATE1Q969F0 183 aa13.11□□□□□ -0.31
PRPF19-206ENST00000541371 TSGA13Q96PP4 275 aa13.11□□□□□ -0.31
PRPF19-206ENST00000541371 TEFMQ96QE5 360 aaKnown RBP13.11□□□□□ -0.31
PRPF19-206ENST00000541371 ZNF670Q9BS34 389 aa13.11□□□□□ -0.31
PRPF19-206ENST00000541371 ADNPQ9H2P0 1102 aa13.11□□□□□ -0.31
PRPF19-206ENST00000541371 FAM83DQ9H4H8 585 aa13.11□□□□□ -0.31
PRPF19-206ENST00000541371 RMI1Q9H9A7 625 aa13.11□□□□□ -0.31
PRPF19-206ENST00000541371 SARS2Q9NP81 518 aaKnown RBP13.11□□□□□ -0.31
PRPF19-206ENST00000541371 PKD2L2Q9NZM6 624 aa13.11□□□□□ -0.31
PRPF19-206ENST00000541371 PDP2Q9P2J9 529 aa13.11□□□□□ -0.31
PRPF19-206ENST00000541371 KCNK6Q9Y257 313 aa13.11□□□□□ -0.31
PRPF19-206ENST00000541371 OAS3Q9Y6K5 1087 aaKnown RBP13.11□□□□□ -0.31
PRPF19-206ENST00000541371 SDK2Q58EX2 2172 aa13.11□□□□□ -0.31
PRPF19-206ENST00000541371 NAV2Q8IVL1 2488 aa13.11□□□□□ -0.31
PRPF19-206ENST00000541371 ZNF891A8MT65 544 aaPredicted RBP13.1□□□□□ -0.31
PRPF19-206ENST00000541371 TERTO14746 1132 aaKnown RBP13.1□□□□□ -0.31
PRPF19-206ENST00000541371 CAPN5O15484 640 aaPredicted RBP13.1□□□□□ -0.31
PRPF19-206ENST00000541371 HLA-DQB2P05538 268 aa13.1□□□□□ -0.31
PRPF19-206ENST00000541371 ACP5P13686 325 aa13.1□□□□□ -0.31
PRPF19-206ENST00000541371 MAPK9P45984 424 aa13.1□□□□□ -0.31
PRPF19-206ENST00000541371 SPINT3P49223 89 aa13.1□□□□□ -0.31
PRPF19-206ENST00000541371 ZBED6P86452 979 aa13.1□□□□□ -0.31
PRPF19-206ENST00000541371 NIPAL4Q0D2K0 466 aa13.1□□□□□ -0.31
PRPF19-206ENST00000541371 IQCB1Q15051 598 aa13.1□□□□□ -0.31
PRPF19-206ENST00000541371 CAVIN1Q6NZI2 390 aaKnown RBP13.1□□□□□ -0.31
PRPF19-206ENST00000541371 IYDQ6PHW0 289 aa13.1□□□□□ -0.31
PRPF19-206ENST00000541371 LYSMD3Q7Z3D4 306 aa13.1□□□□□ -0.31
PRPF19-206ENST00000541371 SLC9B2Q86UD5 537 aa13.1□□□□□ -0.31
PRPF19-206ENST00000541371 ZNF564Q8TBZ8 553 aaPredicted RBP13.1□□□□□ -0.31
PRPF19-206ENST00000541371 LRRN4Q8WUT4 740 aa13.1□□□□□ -0.31
PRPF19-206ENST00000541371 KIAA1143Q96AT1 154 aaPredicted RBP13.1□□□□□ -0.31
PRPF19-206ENST00000541371 LYSMD1Q96S90 227 aa13.1□□□□□ -0.31
PRPF19-206ENST00000541371 HERPUD2Q9BSE4 406 aa13.1□□□□□ -0.31
PRPF19-206ENST00000541371 MLPHQ9BV36 600 aaPredicted RBP13.1□□□□□ -0.31
PRPF19-206ENST00000541371 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.1□□□□□ -0.31
PRPF19-206ENST00000541371 CTTNBP2NLQ9P2B4 639 aa13.1□□□□□ -0.31
PRPF19-206ENST00000541371 TBC1D29Q9UFV1 150 aa13.1□□□□□ -0.31
PRPF19-206ENST00000541371 CNOT6Q9ULM6 557 aaKnown RBP13.1□□□□□ -0.31
PRPF19-206ENST00000541371 PCYT1BQ9Y5K3 369 aaPredicted RBP13.1□□□□□ -0.31
PRPF19-206ENST00000541371 CFAP46Q8IYW2 2715 aa13.1□□□□□ -0.31
PRPF19-206ENST00000541371 RGSL1A5PLK6 1076 aa13.09□□□□□ -0.31
PRPF19-206ENST00000541371 ANKRD66B4E2M5 251 aa13.09□□□□□ -0.31
PRPF19-206ENST00000541371 GRID2O43424 1007 aa13.09□□□□□ -0.31
PRPF19-206ENST00000541371 PROSCO94903 275 aa13.09□□□□□ -0.31
PRPF19-206ENST00000541371 JCHAINP01591 159 aa13.09□□□□□ -0.31
PRPF19-206ENST00000541371 KRT7P08729 469 aa13.09□□□□□ -0.31
PRPF19-206ENST00000541371 MAP4P27816 1152 aaKnown RBP13.09□□□□□ -0.31
PRPF19-206ENST00000541371 CD86P42081 329 aa13.09□□□□□ -0.31
PRPF19-206ENST00000541371 NOP2P46087 812 aaKnown RBP13.09□□□□□ -0.31
PRPF19-206ENST00000541371 CCR10P46092 362 aa13.09□□□□□ -0.31
PRPF19-206ENST00000541371 EPHA4P54764 986 aa13.09□□□□□ -0.31
PRPF19-206ENST00000541371 POLE2P56282 527 aa13.09□□□□□ -0.31
PRPF19-206ENST00000541371 UBASH3AP57075 661 aa13.09□□□□□ -0.31
PRPF19-206ENST00000541371 FANCCQ00597 558 aa13.09□□□□□ -0.31
PRPF19-206ENST00000541371 MC2RQ01718 297 aa13.09□□□□□ -0.31
PRPF19-206ENST00000541371 GBE1Q04446 702 aa13.09□□□□□ -0.31
PRPF19-206ENST00000541371 QPCTQ16769 361 aa13.09□□□□□ -0.31
PRPF19-206ENST00000541371 HENMT1Q5T8I9 393 aaKnown RBP13.09□□□□□ -0.31
PRPF19-206ENST00000541371 CEACAM20Q6UY09 585 aa13.09□□□□□ -0.31
PRPF19-206ENST00000541371 ARHGAP22Q7Z5H3 698 aa13.09□□□□□ -0.31
PRPF19-206ENST00000541371 PHYKPLQ8IUZ5 450 aa13.09□□□□□ -0.31
PRPF19-206ENST00000541371 CCDC13Q8IYE1 715 aa13.09□□□□□ -0.31
PRPF19-206ENST00000541371 NLGN4XQ8N0W4 816 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms