RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 SRPK1Q96SB4 655 aaKnown RBP15.18■□□□□ 0.02
UBE3B-211ENST00000539843 DDA1Q9BW61 102 aa15.18■□□□□ 0.02
UBE3B-211ENST00000539843 EPB41L1Q9H4G0 881 aa15.18■□□□□ 0.02
UBE3B-211ENST00000539843 SLC39A1Q9NY26 324 aa15.18■□□□□ 0.02
UBE3B-211ENST00000539843 PCDHGA4Q9Y5G9 962 aa15.18■□□□□ 0.02
UBE3B-211ENST00000539843 PCDHGA3Q9Y5H0 932 aa15.18■□□□□ 0.02
UBE3B-211ENST00000539843 BPTFQ12830 3046 aa15.18■□□□□ 0.02
UBE3B-211ENST00000539843 KIF26BQ2KJY2 2108 aa15.17■□□□□ 0.02
UBE3B-211ENST00000539843 KIR2DS5A0A0G2JLQ3 304 aa15.17■□□□□ 0.02
UBE3B-211ENST00000539843 A0A0G2JNG1 304 aa15.17■□□□□ 0.02
UBE3B-211ENST00000539843 SSU72P8A0A1W2PR75 194 aa15.17■□□□□ 0.02
UBE3B-211ENST00000539843 ZNF487B1APH4 448 aa15.17■□□□□ 0.02
UBE3B-211ENST00000539843 ANKRD66B4E2M5 251 aa15.17■□□□□ 0.02
UBE3B-211ENST00000539843 KIR2DS3K7RE56 304 aa15.17■□□□□ 0.02
UBE3B-211ENST00000539843 APOL1O14791 398 aa15.17■□□□□ 0.02
UBE3B-211ENST00000539843 PPM1DO15297 605 aa15.17■□□□□ 0.02
UBE3B-211ENST00000539843 JCHAINP01591 159 aa15.17■□□□□ 0.02
UBE3B-211ENST00000539843 TMEM253P0C7T8 217 aa15.17■□□□□ 0.02
UBE3B-211ENST00000539843 THRAP10827 490 aa15.17■□□□□ 0.02
UBE3B-211ENST00000539843 CCL4P13236 92 aa15.17■□□□□ 0.02
UBE3B-211ENST00000539843 KDELR1P24390 212 aa15.17■□□□□ 0.02
UBE3B-211ENST00000539843 ARHGAP25P42331 645 aa15.17■□□□□ 0.02
UBE3B-211ENST00000539843 SPINT3P49223 89 aa15.17■□□□□ 0.02
UBE3B-211ENST00000539843 GBE1Q04446 702 aa15.17■□□□□ 0.02
UBE3B-211ENST00000539843 PPIDQ08752 370 aaKnown RBP15.17■□□□□ 0.02
UBE3B-211ENST00000539843 AP1B1Q10567 949 aa15.17■□□□□ 0.02
UBE3B-211ENST00000539843 MESDQ14696 234 aa15.17■□□□□ 0.02
UBE3B-211ENST00000539843 KIR2DS5Q14953 304 aa15.17■□□□□ 0.02
UBE3B-211ENST00000539843 PTPRRQ15256 657 aa15.17■□□□□ 0.02
UBE3B-211ENST00000539843 NKAIN2Q5VXU1 208 aa15.17■□□□□ 0.02
UBE3B-211ENST00000539843 BZW1Q7L1Q6 419 aaKnown RBP15.17■□□□□ 0.02
UBE3B-211ENST00000539843 LYSMD3Q7Z3D4 306 aa15.17■□□□□ 0.02
UBE3B-211ENST00000539843 PRICKLE2Q7Z3G6 844 aa15.17■□□□□ 0.02
UBE3B-211ENST00000539843 TMPRSS9Q7Z410 1059 aa15.17■□□□□ 0.02
UBE3B-211ENST00000539843 VASH2Q86V25 355 aa15.17■□□□□ 0.02
UBE3B-211ENST00000539843 VSIG1Q86XK7 387 aa15.17■□□□□ 0.02
UBE3B-211ENST00000539843 DTX1Q86Y01 620 aa15.17■□□□□ 0.02
UBE3B-211ENST00000539843 RHOT2Q8IXI1 618 aa15.17■□□□□ 0.02
UBE3B-211ENST00000539843 SFRP1Q8N474 314 aa15.17■□□□□ 0.02
UBE3B-211ENST00000539843 OR8K1Q8NGG5 319 aa15.17■□□□□ 0.02
UBE3B-211ENST00000539843 ARRDC2Q8TBH0 407 aa15.17■□□□□ 0.02
UBE3B-211ENST00000539843 SLC37A2Q8TED4 501 aa15.17■□□□□ 0.02
UBE3B-211ENST00000539843 ART4Q93070 314 aa15.17■□□□□ 0.02
UBE3B-211ENST00000539843 KIAA1143Q96AT1 154 aaPredicted RBP15.17■□□□□ 0.02
UBE3B-211ENST00000539843 COX14Q96I36 57 aa15.17■□□□□ 0.02
UBE3B-211ENST00000539843 RNF157Q96PX1 679 aa15.17■□□□□ 0.02
UBE3B-211ENST00000539843 EFHD1Q9BUP0 239 aa15.17■□□□□ 0.02
UBE3B-211ENST00000539843 SPATA16Q9BXB7 569 aa15.17■□□□□ 0.02
UBE3B-211ENST00000539843 BRD8Q9H0E9 1235 aa15.17■□□□□ 0.02
UBE3B-211ENST00000539843 CARD9Q9H257 536 aa15.17■□□□□ 0.02
UBE3B-211ENST00000539843 ZFYVE1Q9HBF4 777 aa15.17■□□□□ 0.02
UBE3B-211ENST00000539843 SARS2Q9NP81 518 aaKnown RBP15.17■□□□□ 0.02
UBE3B-211ENST00000539843 DTLQ9NZJ0 730 aa15.17■□□□□ 0.02
UBE3B-211ENST00000539843 HEY1Q9Y5J3 304 aa15.17■□□□□ 0.02
UBE3B-211ENST00000539843 UNC13CQ8NB66 2214 aa15.17■□□□□ 0.02
UBE3B-211ENST00000539843 TRBV23OR9-2A0A075B6M9 112 aa15.16■□□□□ 0.02
UBE3B-211ENST00000539843 EFCAB7A8K855 629 aa15.16■□□□□ 0.02
UBE3B-211ENST00000539843 B4E171 279 aa15.16■□□□□ 0.02
UBE3B-211ENST00000539843 GPR89AB7ZAQ6 455 aa15.16■□□□□ 0.02
UBE3B-211ENST00000539843 KCNK1O00180 336 aa15.16■□□□□ 0.02
UBE3B-211ENST00000539843 CAPN5O15484 640 aaPredicted RBP15.16■□□□□ 0.02
UBE3B-211ENST00000539843 SNX2O60749 519 aa15.16■□□□□ 0.02
UBE3B-211ENST00000539843 ATP1A1P05023 1023 aaKnown RBP15.16■□□□□ 0.02
UBE3B-211ENST00000539843 GPR89BP0CG08 455 aa15.16■□□□□ 0.02
UBE3B-211ENST00000539843 ACP5P13686 325 aa15.16■□□□□ 0.02
UBE3B-211ENST00000539843 HNRNPH3P31942 346 aaKnown RBP15.16■□□□□ 0.02
UBE3B-211ENST00000539843 TSPAN7P41732 249 aa15.16■□□□□ 0.02
UBE3B-211ENST00000539843 MAPK9P45984 424 aa15.16■□□□□ 0.02
UBE3B-211ENST00000539843 EPHA4P54764 986 aa15.16■□□□□ 0.02
UBE3B-211ENST00000539843 IFI35P80217 286 aaPredicted RBP15.16■□□□□ 0.02
UBE3B-211ENST00000539843 QPCTQ16769 361 aa15.16■□□□□ 0.02
UBE3B-211ENST00000539843 HENMT1Q5T8I9 393 aaKnown RBP15.16■□□□□ 0.02
UBE3B-211ENST00000539843 PDPK2PQ6A1A2 396 aa15.16■□□□□ 0.02
UBE3B-211ENST00000539843 RFLNAQ6ZTI6 216 aa15.16■□□□□ 0.02
UBE3B-211ENST00000539843 NT5DC3Q86UY8 548 aa15.16■□□□□ 0.02
UBE3B-211ENST00000539843 PTCD2Q8WV60 388 aaKnown RBP15.16■□□□□ 0.02
UBE3B-211ENST00000539843 EXTL1Q92935 676 aa15.16■□□□□ 0.02
UBE3B-211ENST00000539843 CCDC42Q96M95 316 aa15.16■□□□□ 0.02
UBE3B-211ENST00000539843 AGAP2Q99490 1192 aa15.16■□□□□ 0.02
UBE3B-211ENST00000539843 ZPBPQ9BS86 351 aa15.16■□□□□ 0.02
UBE3B-211ENST00000539843 ZSCAN5AQ9BUG6 496 aa15.16■□□□□ 0.02
UBE3B-211ENST00000539843 SEMA4CQ9C0C4 833 aa15.16■□□□□ 0.02
UBE3B-211ENST00000539843 PLEKHM1Q9Y4G2 1056 aa15.16■□□□□ 0.02
UBE3B-211ENST00000539843 GCN1Q92616 2671 aaKnown RBP15.16■□□□□ 0.02
UBE3B-211ENST00000539843 AHCTF1Q8WYP5 2266 aa15.15■□□□□ 0.02
UBE3B-211ENST00000539843 A0A0U1RQS6 177 aa15.15■□□□□ 0.02
UBE3B-211ENST00000539843 GRID2O43424 1007 aa15.15■□□□□ 0.02
UBE3B-211ENST00000539843 DNAJC6O75061 913 aa15.15■□□□□ 0.02
UBE3B-211ENST00000539843 PPFIA2O75334 1257 aa15.15■□□□□ 0.02
UBE3B-211ENST00000539843 SLC25A14O95258 325 aaPredicted RBP15.15■□□□□ 0.02
UBE3B-211ENST00000539843 KRT1P04264 644 aa15.15■□□□□ 0.02
UBE3B-211ENST00000539843 FGF3P11487 239 aaPredicted RBP15.15■□□□□ 0.02
UBE3B-211ENST00000539843 F3P13726 295 aa15.15■□□□□ 0.02
UBE3B-211ENST00000539843 MPSTP25325 297 aa15.15■□□□□ 0.02
UBE3B-211ENST00000539843 TAS2R40P59535 323 aa15.15■□□□□ 0.02
UBE3B-211ENST00000539843 NIPAL4Q0D2K0 466 aa15.15■□□□□ 0.02
UBE3B-211ENST00000539843 NFATC3Q12968 1075 aa15.15■□□□□ 0.02
UBE3B-211ENST00000539843 NFATC2Q13469 925 aa15.15■□□□□ 0.02
UBE3B-211ENST00000539843 SNAP47Q5SQN1 464 aa15.15■□□□□ 0.02
UBE3B-211ENST00000539843 WDR74Q6RFH5 385 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms