RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.64■□□□□ 0.09
RPAIN-206ENST00000539417 FKBPLQ9UIM3 349 aa15.64■□□□□ 0.09
RPAIN-206ENST00000539417 SLC17A4Q9Y2C5 497 aa15.64■□□□□ 0.09
RPAIN-206ENST00000539417 PRKAB1Q9Y478 270 aa15.64■□□□□ 0.09
RPAIN-206ENST00000539417 DGKBQ9Y6T7 804 aa15.64■□□□□ 0.09
RPAIN-206ENST00000539417 PLXNB3Q9ULL4 1909 aa15.64■□□□□ 0.09
RPAIN-206ENST00000539417 ZNF106Q9H2Y7 1883 aaKnown RBP15.64■□□□□ 0.09
RPAIN-206ENST00000539417 LY6G6EA0A0G2JKS1 128 aa15.63■□□□□ 0.09
RPAIN-206ENST00000539417 TNFRSF10CO14798 259 aa15.63■□□□□ 0.09
RPAIN-206ENST00000539417 PSMD3O43242 534 aa15.63■□□□□ 0.09
RPAIN-206ENST00000539417 LPOP22079 712 aaPredicted RBP15.63■□□□□ 0.09
RPAIN-206ENST00000539417 ACTN2P35609 894 aa15.63■□□□□ 0.09
RPAIN-206ENST00000539417 GNPDA1P46926 289 aa15.63■□□□□ 0.09
RPAIN-206ENST00000539417 BASP1P80723 227 aaKnown RBP15.63■□□□□ 0.09
RPAIN-206ENST00000539417 ANKRD22Q5VYY1 191 aa15.63■□□□□ 0.09
RPAIN-206ENST00000539417 ZNF534Q76KX8 674 aa15.63■□□□□ 0.09
RPAIN-206ENST00000539417 CCDC97Q96F63 343 aaPredicted RBP15.63■□□□□ 0.09
RPAIN-206ENST00000539417 DNAJC1Q96KC8 554 aaKnown RBP15.63■□□□□ 0.09
RPAIN-206ENST00000539417 NAP1L3Q99457 506 aaPredicted RBP15.63■□□□□ 0.09
RPAIN-206ENST00000539417 SLC13A1Q9BZW2 595 aa15.63■□□□□ 0.09
RPAIN-206ENST00000539417 SLC32A1Q9H598 525 aa15.63■□□□□ 0.09
RPAIN-206ENST00000539417 CARS2Q9HA77 564 aaKnown RBP15.63■□□□□ 0.09
RPAIN-206ENST00000539417 CASS4Q9NQ75 786 aa15.63■□□□□ 0.09
RPAIN-206ENST00000539417 SPASTQ9UBP0 616 aa15.63■□□□□ 0.09
RPAIN-206ENST00000539417 U3KQA8 63 aa15.63■□□□□ 0.09
RPAIN-206ENST00000539417 SPTBN2O15020 2390 aa15.62■□□□□ 0.09
RPAIN-206ENST00000539417 COL5A1P20908 1838 aaPredicted RBP15.62■□□□□ 0.09
RPAIN-206ENST00000539417 CACNA1AO00555 2505 aa15.62■□□□□ 0.09
RPAIN-206ENST00000539417 MED19A0JLT2 244 aaPredicted RBP15.62■□□□□ 0.09
RPAIN-206ENST00000539417 E7EVH7 732 aa15.62■□□□□ 0.09
RPAIN-206ENST00000539417 H3BM21 787 aa15.62■□□□□ 0.09
RPAIN-206ENST00000539417 YY2O15391 372 aa15.62■□□□□ 0.09
RPAIN-206ENST00000539417 STX7O15400 261 aaKnown RBP15.62■□□□□ 0.09
RPAIN-206ENST00000539417 TOP3BO95985 862 aaKnown RBP15.62■□□□□ 0.09
RPAIN-206ENST00000539417 TNFP01375 233 aa15.62■□□□□ 0.09
RPAIN-206ENST00000539417 PRSS56P0CW18 603 aa15.62■□□□□ 0.09
RPAIN-206ENST00000539417 SPAM1P38567 509 aa15.62■□□□□ 0.09
RPAIN-206ENST00000539417 PTGIRP43119 386 aa15.62■□□□□ 0.09
RPAIN-206ENST00000539417 LMAN1P49257 510 aa15.62■□□□□ 0.09
RPAIN-206ENST00000539417 SIM1P81133 766 aaPredicted RBP15.62■□□□□ 0.09
RPAIN-206ENST00000539417 XIAPP98170 497 aa15.62■□□□□ 0.09
RPAIN-206ENST00000539417 GPS1Q13098 491 aa15.62■□□□□ 0.09
RPAIN-206ENST00000539417 SEPT6Q14141 434 aa15.62■□□□□ 0.09
RPAIN-206ENST00000539417 PROX2Q3B8N5 592 aa15.62■□□□□ 0.09
RPAIN-206ENST00000539417 NRROSQ86YC3 692 aa15.62■□□□□ 0.09
RPAIN-206ENST00000539417 PNPLA1Q8N8W4 532 aa15.62■□□□□ 0.09
RPAIN-206ENST00000539417 OR4C6Q8NH72 309 aa15.62■□□□□ 0.09
RPAIN-206ENST00000539417 NAT14Q8WUY8 206 aa15.62■□□□□ 0.09
RPAIN-206ENST00000539417 BTN2A2Q8WVV5 523 aa15.62■□□□□ 0.09
RPAIN-206ENST00000539417 GLYATL1Q969I3 302 aa15.62■□□□□ 0.09
RPAIN-206ENST00000539417 SCARF2Q96GP6 870 aaPredicted RBP15.62■□□□□ 0.09
RPAIN-206ENST00000539417 CNDP2Q96KP4 475 aaKnown RBP15.62■□□□□ 0.09
RPAIN-206ENST00000539417 PLEKHG4BQ96PX9 1271 aa15.62■□□□□ 0.09
RPAIN-206ENST00000539417 ATXN10Q9UBB4 475 aa15.62■□□□□ 0.09
RPAIN-206ENST00000539417 GLYATL1P3A0A0U1RQE8 302 aa15.61■□□□□ 0.09
RPAIN-206ENST00000539417 CASC3O15234 703 aaKnown RBP15.61■□□□□ 0.09
RPAIN-206ENST00000539417 DNAJC6O75061 913 aa15.61■□□□□ 0.09
RPAIN-206ENST00000539417 TMEM63AO94886 807 aa15.61■□□□□ 0.09
RPAIN-206ENST00000539417 ASMTLO95671 621 aa15.61■□□□□ 0.09
RPAIN-206ENST00000539417 LDOC1O95751 146 aaPredicted RBP15.61■□□□□ 0.09
RPAIN-206ENST00000539417 KELP23276 732 aa15.61■□□□□ 0.09
RPAIN-206ENST00000539417 AK4P27144 223 aaPredicted RBP15.61■□□□□ 0.09
RPAIN-206ENST00000539417 FNTAP49354 379 aa15.61■□□□□ 0.09
RPAIN-206ENST00000539417 CRADDP78560 199 aa15.61■□□□□ 0.09
RPAIN-206ENST00000539417 PEX6Q13608 980 aa15.61■□□□□ 0.09
RPAIN-206ENST00000539417 KCNJ11Q14654 390 aa15.61■□□□□ 0.09
RPAIN-206ENST00000539417 PPP1R21Q6ZMI0 780 aa15.61■□□□□ 0.09
RPAIN-206ENST00000539417 ADGRG6Q86SQ4 1221 aa15.61■□□□□ 0.09
RPAIN-206ENST00000539417 GLRX5Q86SX6 157 aa15.61■□□□□ 0.09
RPAIN-206ENST00000539417 KLHL7Q8IXQ5 586 aa15.61■□□□□ 0.09
RPAIN-206ENST00000539417 CPT1BQ92523 772 aa15.61■□□□□ 0.09
RPAIN-206ENST00000539417 C16orf45Q96MC5 204 aaPredicted RBP15.61■□□□□ 0.09
RPAIN-206ENST00000539417 ZNF778Q96MU6 729 aa15.61■□□□□ 0.09
RPAIN-206ENST00000539417 ZSCAN5AQ9BUG6 496 aa15.61■□□□□ 0.09
RPAIN-206ENST00000539417 OR2AG1Q9H205 316 aa15.61■□□□□ 0.09
RPAIN-206ENST00000539417 FAM96AQ9H5X1 160 aa15.61■□□□□ 0.09
RPAIN-206ENST00000539417 NLGN3Q9NZ94 848 aa15.61■□□□□ 0.09
RPAIN-206ENST00000539417 FTSJ1Q9UET6 329 aa15.61■□□□□ 0.09
RPAIN-206ENST00000539417 SLC2A6Q9UGQ3 507 aa15.61■□□□□ 0.09
RPAIN-206ENST00000539417 PKP3Q9Y446 797 aa15.61■□□□□ 0.09
RPAIN-206ENST00000539417 MROH6A6NGR9 719 aa15.6■□□□□ 0.09
RPAIN-206ENST00000539417 C2orf81A6NN90 581 aa15.6■□□□□ 0.09
RPAIN-206ENST00000539417 ERI2A8K979 691 aaKnown RBP15.6■□□□□ 0.09
RPAIN-206ENST00000539417 LMO7DNF2Z398 122 aa15.6■□□□□ 0.09
RPAIN-206ENST00000539417 SLC25A14O95258 325 aaPredicted RBP15.6■□□□□ 0.09
RPAIN-206ENST00000539417 IVLP07476 585 aa15.6■□□□□ 0.09
RPAIN-206ENST00000539417 CTSEP14091 401 aa15.6■□□□□ 0.09
RPAIN-206ENST00000539417 ZNF8P17098 575 aaPredicted RBP15.6■□□□□ 0.09
RPAIN-206ENST00000539417 CASQ1P31415 396 aa15.6■□□□□ 0.09
RPAIN-206ENST00000539417 ADCY8P40145 1251 aa15.6■□□□□ 0.09
RPAIN-206ENST00000539417 CDKN1CP49918 316 aaPredicted RBP15.6■□□□□ 0.09
RPAIN-206ENST00000539417 ARSDP51689 593 aa15.6■□□□□ 0.09
RPAIN-206ENST00000539417 MRPS25P82663 173 aaKnown RBP15.6■□□□□ 0.09
RPAIN-206ENST00000539417 CDH17Q12864 832 aa15.6■□□□□ 0.09
RPAIN-206ENST00000539417 PYCR3Q53H96 274 aa15.6■□□□□ 0.09
RPAIN-206ENST00000539417 LINC00523Q86TU6 105 aa15.6■□□□□ 0.09
RPAIN-206ENST00000539417 DNAAF3Q8N9W5 541 aa15.6■□□□□ 0.09
RPAIN-206ENST00000539417 APOLD1Q96LR9 279 aa15.6■□□□□ 0.09
RPAIN-206ENST00000539417 TBATAQ96M53 351 aa15.6■□□□□ 0.09
RPAIN-206ENST00000539417 CDH19Q9H159 772 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms