RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 TBC1D10AQ9BXI6 508 aa13.88□□□□□ -0.19
SMARCA4-206ENST00000538456 ZWILCHQ9H900 591 aa13.88□□□□□ -0.19
SMARCA4-206ENST00000538456 ETNK2Q9NVF9 386 aa13.88□□□□□ -0.19
SMARCA4-206ENST00000538456 PLEKHB1Q9UF11 243 aaPredicted RBP13.88□□□□□ -0.19
SMARCA4-206ENST00000538456 CNOT8Q9UFF9 292 aaKnown RBP13.88□□□□□ -0.19
SMARCA4-206ENST00000538456 CROTQ9UKG9 612 aa13.88□□□□□ -0.19
SMARCA4-206ENST00000538456 PCDHB3Q9Y5E6 796 aa13.88□□□□□ -0.19
SMARCA4-206ENST00000538456 H3BRJ5 948 aa13.87□□□□□ -0.19
SMARCA4-206ENST00000538456 DNAJC6O75061 913 aa13.87□□□□□ -0.19
SMARCA4-206ENST00000538456 KATNA1O75449 491 aa13.87□□□□□ -0.19
SMARCA4-206ENST00000538456 AGFG2O95081 481 aa13.87□□□□□ -0.19
SMARCA4-206ENST00000538456 AMPD1P23109 780 aa13.87□□□□□ -0.19
SMARCA4-206ENST00000538456 HCAR3P49019 387 aa13.87□□□□□ -0.19
SMARCA4-206ENST00000538456 EPHB1P54762 984 aa13.87□□□□□ -0.19
SMARCA4-206ENST00000538456 EPHA4P54764 986 aa13.87□□□□□ -0.19
SMARCA4-206ENST00000538456 GFERP55789 205 aa13.87□□□□□ -0.19
SMARCA4-206ENST00000538456 PTSQ03393 145 aa13.87□□□□□ -0.19
SMARCA4-206ENST00000538456 SMTNL2Q2TAL5 461 aa13.87□□□□□ -0.19
SMARCA4-206ENST00000538456 CRTC2Q53ET0 693 aaPredicted RBP13.87□□□□□ -0.19
SMARCA4-206ENST00000538456 MARC1Q5VT66 337 aa13.87□□□□□ -0.19
SMARCA4-206ENST00000538456 TCTN3Q6NUS6 607 aa13.87□□□□□ -0.19
SMARCA4-206ENST00000538456 IYDQ6PHW0 289 aa13.87□□□□□ -0.19
SMARCA4-206ENST00000538456 CCDC13Q8IYE1 715 aa13.87□□□□□ -0.19
SMARCA4-206ENST00000538456 GALNT6Q8NCL4 622 aa13.87□□□□□ -0.19
SMARCA4-206ENST00000538456 NSMCE1Q8WV22 266 aa13.87□□□□□ -0.19
SMARCA4-206ENST00000538456 SH3KBP1Q96B97 665 aa13.87□□□□□ -0.19
SMARCA4-206ENST00000538456 COX14Q96I36 57 aa13.87□□□□□ -0.19
SMARCA4-206ENST00000538456 ELMO2Q96JJ3 720 aa13.87□□□□□ -0.19
SMARCA4-206ENST00000538456 NUP62CLQ9H1M0 184 aa13.87□□□□□ -0.19
SMARCA4-206ENST00000538456 NT5MQ9NPB1 228 aa13.87□□□□□ -0.19
SMARCA4-206ENST00000538456 SIDT1Q9NXL6 827 aaKnown RBP13.87□□□□□ -0.19
SMARCA4-206ENST00000538456 POLHQ9Y253 713 aa13.87□□□□□ -0.19
SMARCA4-206ENST00000538456 OAS3Q9Y6K5 1087 aaKnown RBP13.87□□□□□ -0.19
SMARCA4-206ENST00000538456 CREBBPQ92793 2442 aa13.86□□□□□ -0.19
SMARCA4-206ENST00000538456 CDC14CA4D256 554 aa13.86□□□□□ -0.19
SMARCA4-206ENST00000538456 A6NCN8 305 aa13.86□□□□□ -0.19
SMARCA4-206ENST00000538456 TMEM191CA6NGB0 347 aa13.86□□□□□ -0.19
SMARCA4-206ENST00000538456 LRCH4O75427 683 aa13.86□□□□□ -0.19
SMARCA4-206ENST00000538456 RFPL1O75677 317 aa13.86□□□□□ -0.19
SMARCA4-206ENST00000538456 PYGLP06737 847 aa13.86□□□□□ -0.19
SMARCA4-206ENST00000538456 GNLYP22749 145 aa13.86□□□□□ -0.19
SMARCA4-206ENST00000538456 ARL4AP40617 200 aa13.86□□□□□ -0.19
SMARCA4-206ENST00000538456 UBXN1Q04323 297 aa13.86□□□□□ -0.19
SMARCA4-206ENST00000538456 ITKQ08881 620 aa13.86□□□□□ -0.19
SMARCA4-206ENST00000538456 MAP7Q14244 749 aa13.86□□□□□ -0.19
SMARCA4-206ENST00000538456 RALGPS1Q5JS13 557 aa13.86□□□□□ -0.19
SMARCA4-206ENST00000538456 PLEKHA7Q6IQ23 1121 aa13.86□□□□□ -0.19
SMARCA4-206ENST00000538456 C6orf15Q6UXA7 325 aaPredicted RBP13.86□□□□□ -0.19
SMARCA4-206ENST00000538456 ZNF765Q7L2R6 523 aa13.86□□□□□ -0.19
SMARCA4-206ENST00000538456 PLXDC1Q8IUK5 500 aa13.86□□□□□ -0.19
SMARCA4-206ENST00000538456 PSTKQ8IV42 348 aaKnown RBP13.86□□□□□ -0.19
SMARCA4-206ENST00000538456 NDUFAF2Q8N183 169 aa13.86□□□□□ -0.19
SMARCA4-206ENST00000538456 ENOX1Q8TC92 643 aaKnown RBP13.86□□□□□ -0.19
SMARCA4-206ENST00000538456 HSPH1Q92598 858 aa13.86□□□□□ -0.19
SMARCA4-206ENST00000538456 STAMBPL1Q96FJ0 436 aa13.86□□□□□ -0.19
SMARCA4-206ENST00000538456 HERPUD2Q9BSE4 406 aa13.86□□□□□ -0.19
SMARCA4-206ENST00000538456 PRDM8Q9NQV8 689 aa13.86□□□□□ -0.19
SMARCA4-206ENST00000538456 FANCLQ9NW38 375 aa13.86□□□□□ -0.19
SMARCA4-206ENST00000538456 VPS18Q9P253 973 aa13.86□□□□□ -0.19
SMARCA4-206ENST00000538456 CPNE7Q9UBL6 633 aa13.86□□□□□ -0.19
SMARCA4-206ENST00000538456 PPIL1Q9Y3C6 166 aa13.86□□□□□ -0.19
SMARCA4-206ENST00000538456 CENPEQ02224 2701 aa13.86□□□□□ -0.19
SMARCA4-206ENST00000538456 MN1Q10571 1320 aaPredicted RBP13.86□□□□□ -0.19
SMARCA4-206ENST00000538456 PRRC2CQ9Y520 2896 aaKnown RBP13.85□□□□□ -0.19
SMARCA4-206ENST00000538456 A0A0J9YYE9 177 aa13.85□□□□□ -0.19
SMARCA4-206ENST00000538456 LGALS16A8MUM7 142 aa13.85□□□□□ -0.19
SMARCA4-206ENST00000538456 VPS4BO75351 444 aa13.85□□□□□ -0.19
SMARCA4-206ENST00000538456 DNAJB5O75953 348 aa13.85□□□□□ -0.19
SMARCA4-206ENST00000538456 KIAA0754O94854 1291 aa13.85□□□□□ -0.19
SMARCA4-206ENST00000538456 TRBC1P01850 177 aa13.85□□□□□ -0.19
SMARCA4-206ENST00000538456 PDGFAP04085 211 aa13.85□□□□□ -0.19
SMARCA4-206ENST00000538456 ANKRD34CP0C6C1 535 aa13.85□□□□□ -0.19
SMARCA4-206ENST00000538456 F3P13726 295 aa13.85□□□□□ -0.19
SMARCA4-206ENST00000538456 SLC2A4P14672 509 aa13.85□□□□□ -0.19
SMARCA4-206ENST00000538456 TCF4P15884 667 aa13.85□□□□□ -0.19
SMARCA4-206ENST00000538456 FERP16591 822 aa13.85□□□□□ -0.19
SMARCA4-206ENST00000538456 ZNF30P17039 623 aa13.85□□□□□ -0.19
SMARCA4-206ENST00000538456 TYRP1P17643 537 aa13.85□□□□□ -0.19
SMARCA4-206ENST00000538456 SEPHS1P49903 392 aa13.85□□□□□ -0.19
SMARCA4-206ENST00000538456 ZNF135P52742 658 aaPredicted RBP13.85□□□□□ -0.19
SMARCA4-206ENST00000538456 STC1P52823 247 aa13.85□□□□□ -0.19
SMARCA4-206ENST00000538456 CDH6P55285 790 aa13.85□□□□□ -0.19
SMARCA4-206ENST00000538456 SH3BP2P78314 561 aa13.85□□□□□ -0.19
SMARCA4-206ENST00000538456 CT47A1Q5JQC4 288 aaPredicted RBP13.85□□□□□ -0.19
SMARCA4-206ENST00000538456 LYSMD3Q7Z3D4 306 aa13.85□□□□□ -0.19
SMARCA4-206ENST00000538456 RASGRP3Q8IV61 690 aa13.85□□□□□ -0.19
SMARCA4-206ENST00000538456 C9orf72Q96LT7 481 aa13.85□□□□□ -0.19
SMARCA4-206ENST00000538456 TGM7Q96PF1 710 aa13.85□□□□□ -0.19
SMARCA4-206ENST00000538456 CSPG4P5Q96PW8 444 aa13.85□□□□□ -0.19
SMARCA4-206ENST00000538456 OR6C1Q96RD1 312 aa13.85□□□□□ -0.19
SMARCA4-206ENST00000538456 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.85□□□□□ -0.19
SMARCA4-206ENST00000538456 TWSG1Q9GZX9 223 aa13.85□□□□□ -0.19
SMARCA4-206ENST00000538456 OSGEPL1Q9H4B0 414 aa13.85□□□□□ -0.19
SMARCA4-206ENST00000538456 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.85□□□□□ -0.19
SMARCA4-206ENST00000538456 LNPEPQ9UIQ6 1025 aa13.85□□□□□ -0.19
SMARCA4-206ENST00000538456 TLK1Q9UKI8 766 aa13.85□□□□□ -0.19
SMARCA4-206ENST00000538456 VPS4AQ9UN37 437 aa13.85□□□□□ -0.19
SMARCA4-206ENST00000538456 TTLL3Q9Y4R7 772 aa13.85□□□□□ -0.19
SMARCA4-206ENST00000538456 ESPL1Q14674 2120 aa13.84□□□□□ -0.19
SMARCA4-206ENST00000538456 ITPR2Q14571 2701 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms