RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 PYGLP06737 847 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 CCL5P13501 91 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 EEF1DP29692 281 aaKnown RBP13.93□□□□□ -0.18
LIMK1-208ENST00000538333 ACADVLP49748 655 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 EPHB3P54753 998 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 RHOAP61586 193 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 GSTA3Q16772 222 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 SFT2D3Q587I9 215 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 ATXN7L2Q5T6C5 722 aaPredicted RBP13.93□□□□□ -0.18
LIMK1-208ENST00000538333 TXNDC8Q6A555 127 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 DDX53Q86TM3 631 aaKnown RBP13.93□□□□□ -0.18
LIMK1-208ENST00000538333 PHYKPLQ8IUZ5 450 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 FBXO39Q8N4B4 442 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 NKAPQ8N5F7 415 aaKnown RBP13.93□□□□□ -0.18
LIMK1-208ENST00000538333 RNF148Q8N7C7 305 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 DCAF4L2Q8NA75 395 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 OR9I1Q8NGQ6 314 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 CD200R1Q8TD46 325 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 TWIST2Q8WVJ9 160 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 TUBB1Q9H4B7 451 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 PTGDR2Q9Y5Y4 395 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 ZNF106Q9H2Y7 1883 aaKnown RBP13.92□□□□□ -0.18
LIMK1-208ENST00000538333 NPEPPSL1A6NEC2 478 aa13.92□□□□□ -0.18
LIMK1-208ENST00000538333 PIP5K1BO14986 540 aa13.92□□□□□ -0.18
LIMK1-208ENST00000538333 VPS26AO75436 327 aa13.92□□□□□ -0.18
LIMK1-208ENST00000538333 SNRPB2P08579 225 aaKnown RBP13.92□□□□□ -0.18
LIMK1-208ENST00000538333 GPX3P22352 226 aa13.92□□□□□ -0.18
LIMK1-208ENST00000538333 PSME3P61289 254 aa13.92□□□□□ -0.18
LIMK1-208ENST00000538333 DEFB103AP81534 67 aa13.92□□□□□ -0.18
LIMK1-208ENST00000538333 CLCQ05315 142 aa13.92□□□□□ -0.18
LIMK1-208ENST00000538333 LCP2Q13094 533 aa13.92□□□□□ -0.18
LIMK1-208ENST00000538333 ZRANB3Q5FWF4 1079 aa13.92□□□□□ -0.18
LIMK1-208ENST00000538333 C8orf82Q6P1X6 216 aaPredicted RBP13.92□□□□□ -0.18
LIMK1-208ENST00000538333 FUNDC1Q8IVP5 155 aa13.92□□□□□ -0.18
LIMK1-208ENST00000538333 PQLC1Q8N2U9 271 aa13.92□□□□□ -0.18
LIMK1-208ENST00000538333 SNX31Q8N9S9 440 aa13.92□□□□□ -0.18
LIMK1-208ENST00000538333 SIDT2Q8NBJ9 832 aaKnown RBP13.92□□□□□ -0.18
LIMK1-208ENST00000538333 TRPC4APQ8TEL6 797 aa13.92□□□□□ -0.18
LIMK1-208ENST00000538333 KCNJ9Q92806 393 aa13.92□□□□□ -0.18
LIMK1-208ENST00000538333 KCNA7Q96RP8 456 aa13.92□□□□□ -0.18
LIMK1-208ENST00000538333 SLC25A23Q9BV35 468 aa13.92□□□□□ -0.18
LIMK1-208ENST00000538333 SPG21Q9NZD8 308 aa13.92□□□□□ -0.18
LIMK1-208ENST00000538333 ZNF711Q9Y462 761 aa13.92□□□□□ -0.18
LIMK1-208ENST00000538333 PCDHB9Q9Y5E1 797 aa13.92□□□□□ -0.18
LIMK1-208ENST00000538333 CPQQ9Y646 472 aa13.92□□□□□ -0.18
LIMK1-208ENST00000538333 SYCE1LA8MT33 242 aa13.92□□□□□ -0.18
LIMK1-208ENST00000538333 K7ERQ8 282 aa13.92□□□□□ -0.18
LIMK1-208ENST00000538333 STX16O14662 325 aa13.92□□□□□ -0.18
LIMK1-208ENST00000538333 GPR39O43194 453 aa13.92□□□□□ -0.18
LIMK1-208ENST00000538333 MRPS22P82650 360 aaKnown RBP13.92□□□□□ -0.18
LIMK1-208ENST00000538333 CDH18Q13634 790 aa13.92□□□□□ -0.18
LIMK1-208ENST00000538333 LRRC36Q1X8D7 754 aa13.92□□□□□ -0.18
LIMK1-208ENST00000538333 OGFRL1Q5TC84 451 aaPredicted RBP13.92□□□□□ -0.18
LIMK1-208ENST00000538333 FAM117BQ6P1L5 589 aa13.92□□□□□ -0.18
LIMK1-208ENST00000538333 PCDH20Q8N6Y1 951 aaKnown RBP13.92□□□□□ -0.18
LIMK1-208ENST00000538333 PIH1D2Q8WWB5 315 aa13.92□□□□□ -0.18
LIMK1-208ENST00000538333 KLHL4Q9C0H6 718 aa13.92□□□□□ -0.18
LIMK1-208ENST00000538333 P2RY12Q9H244 342 aa13.92□□□□□ -0.18
LIMK1-208ENST00000538333 VCX3BQ9H321 246 aa13.92□□□□□ -0.18
LIMK1-208ENST00000538333 MAGEE1Q9HCI5 957 aa13.92□□□□□ -0.18
LIMK1-208ENST00000538333 C6orf203Q9P0P8 240 aaPredicted RBP13.92□□□□□ -0.18
LIMK1-208ENST00000538333 TYW5A2RUC4 315 aaKnown RBP13.91□□□□□ -0.18
LIMK1-208ENST00000538333 DPPA5A6NC42 116 aa13.91□□□□□ -0.18
LIMK1-208ENST00000538333 E7ENX8 843 aa13.91□□□□□ -0.18
LIMK1-208ENST00000538333 BTN3A1O00481 513 aa13.91□□□□□ -0.18
LIMK1-208ENST00000538333 TRIM38O00635 465 aa13.91□□□□□ -0.18
LIMK1-208ENST00000538333 PFDN6O15212 129 aa13.91□□□□□ -0.18
LIMK1-208ENST00000538333 TEX28O15482 410 aa13.91□□□□□ -0.18
LIMK1-208ENST00000538333 PEX1O43933 1283 aa13.91□□□□□ -0.18
LIMK1-208ENST00000538333 PGLSO95336 258 aa13.91□□□□□ -0.18
LIMK1-208ENST00000538333 HMGCLP35914 325 aa13.91□□□□□ -0.18
LIMK1-208ENST00000538333 PTGER3P43115 390 aa13.91□□□□□ -0.18
LIMK1-208ENST00000538333 HK3P52790 923 aa13.91□□□□□ -0.18
LIMK1-208ENST00000538333 AP1S1P61966 158 aa13.91□□□□□ -0.18
LIMK1-208ENST00000538333 TRIP10Q15642 601 aa13.91□□□□□ -0.18
LIMK1-208ENST00000538333 FBXO48Q5FWF7 155 aa13.91□□□□□ -0.18
LIMK1-208ENST00000538333 AARS2Q5JTZ9 985 aaKnown RBP13.91□□□□□ -0.18
LIMK1-208ENST00000538333 C1orf53Q5VUE5 145 aa13.91□□□□□ -0.18
LIMK1-208ENST00000538333 ANKS6Q68DC2 871 aa13.91□□□□□ -0.18
LIMK1-208ENST00000538333 ZFP1Q6P2D0 407 aa13.91□□□□□ -0.18
LIMK1-208ENST00000538333 TMEM154Q6P9G4 183 aa13.91□□□□□ -0.18
LIMK1-208ENST00000538333 PAOXQ6QHF9 649 aa13.91□□□□□ -0.18
LIMK1-208ENST00000538333 HACD2Q6Y1H2 254 aa13.91□□□□□ -0.18
LIMK1-208ENST00000538333 APCDD1Q8J025 514 aa13.91□□□□□ -0.18
LIMK1-208ENST00000538333 BHLHE22Q8NFJ8 381 aaPredicted RBP13.91□□□□□ -0.18
LIMK1-208ENST00000538333 EEF1AKMT1Q8WVE0 214 aa13.91□□□□□ -0.18
LIMK1-208ENST00000538333 PPP2R3CQ969Q6 453 aa13.91□□□□□ -0.18
LIMK1-208ENST00000538333 NR1H4Q96RI1 486 aaPredicted RBP13.91□□□□□ -0.18
LIMK1-208ENST00000538333 EBF3Q9H4W6 596 aa13.91□□□□□ -0.18
LIMK1-208ENST00000538333 SAGE1Q9NXZ1 904 aa13.91□□□□□ -0.18
LIMK1-208ENST00000538333 BCAP29Q9UHQ4 241 aa13.91□□□□□ -0.18
LIMK1-208ENST00000538333 TRMT6Q9UJA5 497 aaKnown RBP13.91□□□□□ -0.18
LIMK1-208ENST00000538333 FNDC3AQ9Y2H6 1198 aaKnown RBP13.91□□□□□ -0.18
LIMK1-208ENST00000538333 COMMD10Q9Y6G5 202 aa13.91□□□□□ -0.18
LIMK1-208ENST00000538333 MKI67P46013 3256 aaKnown RBP13.91□□□□□ -0.18
LIMK1-208ENST00000538333 ABHD14A-ACY1A0A1B0GW23 586 aa13.9□□□□□ -0.18
LIMK1-208ENST00000538333 TRIM24O15164 1050 aa13.9□□□□□ -0.18
LIMK1-208ENST00000538333 NRP2O60462 931 aa13.9□□□□□ -0.18
LIMK1-208ENST00000538333 LILRB3O75022 631 aa13.9□□□□□ -0.18
LIMK1-208ENST00000538333 ESR1P03372 595 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms