RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 ARFGAP3Q9NP61 516 aa14.18□□□□□ -0.14
RTN3P1-201ENST00000536295 UBP1Q9NZI7 540 aa14.18□□□□□ -0.14
RTN3P1-201ENST00000536295 CNOT6Q9ULM6 557 aaKnown RBP14.18□□□□□ -0.14
RTN3P1-201ENST00000536295 PCDHA13Q9Y5I0 950 aa14.18□□□□□ -0.14
RTN3P1-201ENST00000536295 IGSF10Q6WRI0 2623 aa14.18□□□□□ -0.14
RTN3P1-201ENST00000536295 A0A0A6YYK5 440 aaPredicted RBP14.17□□□□□ -0.14
RTN3P1-201ENST00000536295 F5H423 210 aaPredicted RBP14.17□□□□□ -0.14
RTN3P1-201ENST00000536295 PPM1DO15297 605 aa14.17□□□□□ -0.14
RTN3P1-201ENST00000536295 ZW10O43264 779 aa14.17□□□□□ -0.14
RTN3P1-201ENST00000536295 DNAJC6O75061 913 aa14.17□□□□□ -0.14
RTN3P1-201ENST00000536295 PMPCBO75439 489 aa14.17□□□□□ -0.14
RTN3P1-201ENST00000536295 CPNE6O95741 557 aa14.17□□□□□ -0.14
RTN3P1-201ENST00000536295 PTPN3P26045 913 aa14.17□□□□□ -0.14
RTN3P1-201ENST00000536295 MLLT3P42568 568 aaPredicted RBP14.17□□□□□ -0.14
RTN3P1-201ENST00000536295 MARCKSL1P49006 195 aa14.17□□□□□ -0.14
RTN3P1-201ENST00000536295 MAPK10P53779 464 aa14.17□□□□□ -0.14
RTN3P1-201ENST00000536295 UCNP55089 124 aa14.17□□□□□ -0.14
RTN3P1-201ENST00000536295 CDK18Q07002 472 aa14.17□□□□□ -0.14
RTN3P1-201ENST00000536295 ADCY2Q08462 1091 aa14.17□□□□□ -0.14
RTN3P1-201ENST00000536295 TFDP2Q14188 446 aa14.17□□□□□ -0.14
RTN3P1-201ENST00000536295 SPA17Q15506 151 aa14.17□□□□□ -0.14
RTN3P1-201ENST00000536295 TEX44Q53QW1 395 aa14.17□□□□□ -0.14
RTN3P1-201ENST00000536295 ZNF648Q5T619 568 aaPredicted RBP14.17□□□□□ -0.14
RTN3P1-201ENST00000536295 NKAIN2Q5VXU1 208 aa14.17□□□□□ -0.14
RTN3P1-201ENST00000536295 BZW1Q7L1Q6 419 aaKnown RBP14.17□□□□□ -0.14
RTN3P1-201ENST00000536295 ZNF438Q7Z4V0 828 aa14.17□□□□□ -0.14
RTN3P1-201ENST00000536295 ZC3H18Q86VM9 953 aaKnown RBP14.17□□□□□ -0.14
RTN3P1-201ENST00000536295 CCDC50Q8IVM0 306 aa14.17□□□□□ -0.14
RTN3P1-201ENST00000536295 SLITRK4Q8IW52 837 aa14.17□□□□□ -0.14
RTN3P1-201ENST00000536295 RAVER1Q8IY67 606 aaKnown RBP14.17□□□□□ -0.14
RTN3P1-201ENST00000536295 TFB1MQ8WVM0 346 aaKnown RBP14.17□□□□□ -0.14
RTN3P1-201ENST00000536295 EID2BQ96D98 161 aa14.17□□□□□ -0.14
RTN3P1-201ENST00000536295 CMKLR1Q99788 373 aa14.17□□□□□ -0.14
RTN3P1-201ENST00000536295 SPATA16Q9BXB7 569 aa14.17□□□□□ -0.14
RTN3P1-201ENST00000536295 GPR63Q9BZJ6 419 aa14.17□□□□□ -0.14
RTN3P1-201ENST00000536295 ZMYND15Q9H091 742 aa14.17□□□□□ -0.14
RTN3P1-201ENST00000536295 VPS18Q9P253 973 aa14.17□□□□□ -0.14
RTN3P1-201ENST00000536295 KCNK6Q9Y257 313 aa14.17□□□□□ -0.14
RTN3P1-201ENST00000536295 ZNF711Q9Y462 761 aa14.17□□□□□ -0.14
RTN3P1-201ENST00000536295 ARHGEF17Q96PE2 2063 aaPredicted RBP14.17□□□□□ -0.14
RTN3P1-201ENST00000536295 TEX51A0A1B0GUA7 166 aa14.16□□□□□ -0.14
RTN3P1-201ENST00000536295 RGSL1A5PLK6 1076 aa14.16□□□□□ -0.14
RTN3P1-201ENST00000536295 EML2O95834 649 aa14.16□□□□□ -0.14
RTN3P1-201ENST00000536295 PRB1P04280 392 aa14.16□□□□□ -0.14
RTN3P1-201ENST00000536295 ACP5P13686 325 aa14.16□□□□□ -0.14
RTN3P1-201ENST00000536295 CD1CP29017 333 aa14.16□□□□□ -0.14
RTN3P1-201ENST00000536295 ETV5P41161 510 aa14.16□□□□□ -0.14
RTN3P1-201ENST00000536295 NR2C2P49116 596 aa14.16□□□□□ -0.14
RTN3P1-201ENST00000536295 HADHBP55084 474 aaKnown RBP14.16□□□□□ -0.14
RTN3P1-201ENST00000536295 CLN3Q13286 438 aa14.16□□□□□ -0.14
RTN3P1-201ENST00000536295 LRP8Q14114 963 aa14.16□□□□□ -0.14
RTN3P1-201ENST00000536295 C16orf72Q14CZ0 275 aa14.16□□□□□ -0.14
RTN3P1-201ENST00000536295 PRKD1Q15139 912 aaPredicted RBP14.16□□□□□ -0.14
RTN3P1-201ENST00000536295 TFDP3Q5H9I0 405 aa14.16□□□□□ -0.14
RTN3P1-201ENST00000536295 ZNF569Q5MCW4 686 aa14.16□□□□□ -0.14
RTN3P1-201ENST00000536295 CCDC70Q6NSX1 233 aa14.16□□□□□ -0.14
RTN3P1-201ENST00000536295 ZNF761Q86XN6 746 aaPredicted RBP14.16□□□□□ -0.14
RTN3P1-201ENST00000536295 RCBTB1Q8NDN9 531 aa14.16□□□□□ -0.14
RTN3P1-201ENST00000536295 GPR26Q8NDV2 337 aa14.16□□□□□ -0.14
RTN3P1-201ENST00000536295 SLC37A2Q8TED4 501 aa14.16□□□□□ -0.14
RTN3P1-201ENST00000536295 SLC39A7Q92504 469 aa14.16□□□□□ -0.14
RTN3P1-201ENST00000536295 P3H4Q92791 437 aa14.16□□□□□ -0.14
RTN3P1-201ENST00000536295 TEKT5Q96M29 485 aa14.16□□□□□ -0.14
RTN3P1-201ENST00000536295 MAGEE1Q9HCI5 957 aa14.16□□□□□ -0.14
RTN3P1-201ENST00000536295 KCNK4Q9NYG8 393 aa14.16□□□□□ -0.14
RTN3P1-201ENST00000536295 PCDHGA7Q9Y5G6 932 aa14.16□□□□□ -0.14
RTN3P1-201ENST00000536295 PTPRQQ9UMZ3 2332 aa14.16□□□□□ -0.14
RTN3P1-201ENST00000536295 UNC13CQ8NB66 2214 aa14.15□□□□□ -0.14
RTN3P1-201ENST00000536295 hCG_1818297A0A087WSY0 165 aa14.15□□□□□ -0.14
RTN3P1-201ENST00000536295 PRAMEF33A0A0G2JMD5 474 aa14.15□□□□□ -0.14
RTN3P1-201ENST00000536295 ATXN7O15265 892 aaPredicted RBP14.15□□□□□ -0.14
RTN3P1-201ENST00000536295 SNX2O60749 519 aa14.15□□□□□ -0.14
RTN3P1-201ENST00000536295 PRAMEF10O60809 474 aa14.15□□□□□ -0.14
RTN3P1-201ENST00000536295 ZRANB2O95218 330 aaKnown RBP eCLIP14.15□□□□□ -0.14
RTN3P1-201ENST00000536295 SLC25A14O95258 325 aaPredicted RBP14.15□□□□□ -0.14
RTN3P1-201ENST00000536295 LCA5LO95447 670 aa14.15□□□□□ -0.14
RTN3P1-201ENST00000536295 NDST3O95803 873 aa14.15□□□□□ -0.14
RTN3P1-201ENST00000536295 NFKB1P19838 968 aa14.15□□□□□ -0.14
RTN3P1-201ENST00000536295 MPSTP25325 297 aa14.15□□□□□ -0.14
RTN3P1-201ENST00000536295 CD68P34810 354 aaPredicted RBP14.15□□□□□ -0.14
RTN3P1-201ENST00000536295 CYLC1P35663 651 aaPredicted RBP14.15□□□□□ -0.14
RTN3P1-201ENST00000536295 GPR3P46089 330 aa14.15□□□□□ -0.14
RTN3P1-201ENST00000536295 VAC14Q08AM6 782 aa14.15□□□□□ -0.14
RTN3P1-201ENST00000536295 WASHC5Q12768 1159 aa14.15□□□□□ -0.14
RTN3P1-201ENST00000536295 NR1D2Q14995 579 aa14.15□□□□□ -0.14
RTN3P1-201ENST00000536295 TAZQ16635 292 aa14.15□□□□□ -0.14
RTN3P1-201ENST00000536295 ZNF574Q6ZN55 896 aaPredicted RBP14.15□□□□□ -0.14
RTN3P1-201ENST00000536295 TMC3Q7Z5M5 1100 aa14.15□□□□□ -0.14
RTN3P1-201ENST00000536295 DAAM2Q86T65 1068 aa14.15□□□□□ -0.14
RTN3P1-201ENST00000536295 CCDC170Q8IYT3 715 aa14.15□□□□□ -0.14
RTN3P1-201ENST00000536295 KATNAL2Q8IYT4 538 aa14.15□□□□□ -0.14
RTN3P1-201ENST00000536295 KRT35Q92764 455 aa14.15□□□□□ -0.14
RTN3P1-201ENST00000536295 USP7Q93009 1102 aa14.15□□□□□ -0.14
RTN3P1-201ENST00000536295 TMEM159Q96B96 161 aa14.15□□□□□ -0.14
RTN3P1-201ENST00000536295 TADA1Q96BN2 335 aa14.15□□□□□ -0.14
RTN3P1-201ENST00000536295 CCDC74BQ96LY2 380 aa14.15□□□□□ -0.14
RTN3P1-201ENST00000536295 SLC38A3Q99624 504 aa14.15□□□□□ -0.14
RTN3P1-201ENST00000536295 HEMGNQ9BXL5 484 aa14.15□□□□□ -0.14
RTN3P1-201ENST00000536295 OR2AG1Q9H205 316 aa14.15□□□□□ -0.14
RTN3P1-201ENST00000536295 LUC7LQ9NQ29 371 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms