RNA–Protein interactions for RNA: ENST00000535967.5

DDB1-207, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-207ENST00000535967 SPINT3P49223 89 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 CLDN2P57739 230 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 PFN3P60673 137 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 BASP1P80723 227 aaKnown RBP12.62□□□□□ -0.39
DDB1-207ENST00000535967 CDK16Q00536 496 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 PDE1BQ01064 536 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 CKAP4Q07065 602 aaKnown RBP12.62□□□□□ -0.39
DDB1-207ENST00000535967 CDH17Q12864 832 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 TUBB2AQ13885 445 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 TPSAB1Q15661 275 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 ZDHHC20Q5W0Z9 365 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 DENND5AQ6IQ26 1287 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 Q6ZVL8 140 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 SYDE1Q6ZW31 735 aaPredicted RBP12.62□□□□□ -0.39
DDB1-207ENST00000535967 ZNF572Q7Z3I7 529 aaPredicted RBP12.62□□□□□ -0.39
DDB1-207ENST00000535967 PRUNE1Q86TP1 453 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 TAB3Q8N5C8 712 aaPredicted RBP12.62□□□□□ -0.39
DDB1-207ENST00000535967 OR13H1Q8NG92 308 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 BLOC1S5Q8TDH9 187 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 TUBB2BQ9BVA1 445 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 ERVMER34-1Q9H9K5 563 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 GDF3Q9NR23 364 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 MBNL1Q9NR56 388 aaKnown RBP12.62□□□□□ -0.39
DDB1-207ENST00000535967 APOBEC2Q9Y235 224 aaKnown RBP12.62□□□□□ -0.39
DDB1-207ENST00000535967 CA5BQ9Y2D0 317 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 TDRD6O60522 2096 aaKnown RBP12.62□□□□□ -0.39
DDB1-207ENST00000535967 YKT6O15498 198 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 USP12O75317 370 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 PPFIA2O75334 1257 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 DKK1O94907 266 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 ZIC2O95409 532 aaPredicted RBP12.62□□□□□ -0.39
DDB1-207ENST00000535967 CRTAMO95727 393 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 PCCBP05166 539 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 APRTP07741 180 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 HOXC4P09017 264 aaPredicted RBP12.62□□□□□ -0.39
DDB1-207ENST00000535967 MAGEA6P43360 314 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 THOP1P52888 689 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 KIAA1024LP59773 190 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 PTK6Q13882 451 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 DHX34Q14147 1143 aaKnown RBP12.62□□□□□ -0.39
DDB1-207ENST00000535967 PTK2BQ14289 1009 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 SPARCL1Q14515 664 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 PPP1R7Q15435 360 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 TAF1AQ15573 450 aaPredicted RBP12.62□□□□□ -0.39
DDB1-207ENST00000535967 HLA-BQ31612 363 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 HENMT1Q5T8I9 393 aaKnown RBP12.62□□□□□ -0.39
DDB1-207ENST00000535967 LAYNQ6UX15 382 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 PPP1R21Q6ZMI0 780 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 MACC1Q6ZN28 852 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 Q6ZSR6 202 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 TTC30BQ8N4P2 665 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 BRSK1Q8TDC3 778 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 AP2M1Q96CW1 435 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 PLEKHG4BQ96PX9 1271 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 USB1Q9BQ65 265 aaKnown RBP12.62□□□□□ -0.39
DDB1-207ENST00000535967 APOL2Q9BQE5 337 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 ABCG8Q9H221 673 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 TM7SF3Q9NS93 570 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.62□□□□□ -0.39
DDB1-207ENST00000535967 CDC23Q9UJX2 597 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 SHOC2Q9UQ13 582 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 SNX11Q9Y5W9 270 aa12.62□□□□□ -0.39
DDB1-207ENST00000535967 ZNF462Q96JM2 2506 aa12.61□□□□□ -0.39
DDB1-207ENST00000535967 A0A0U1RQS6 177 aa12.61□□□□□ -0.39
DDB1-207ENST00000535967 SPTY2D1-AS1A0A0U1RR47 76 aa12.61□□□□□ -0.39
DDB1-207ENST00000535967 FAM149AA5PLN7 773 aa12.61□□□□□ -0.39
DDB1-207ENST00000535967 C2orf81A6NN90 581 aa12.61□□□□□ -0.39
DDB1-207ENST00000535967 S1PR4O95977 384 aa12.61□□□□□ -0.39
DDB1-207ENST00000535967 SLC4A1P02730 911 aa12.61□□□□□ -0.39
DDB1-207ENST00000535967 ZNF883P0CG24 379 aa12.61□□□□□ -0.39
DDB1-207ENST00000535967 KELP23276 732 aa12.61□□□□□ -0.39
DDB1-207ENST00000535967 TRIM23P36406 574 aa12.61□□□□□ -0.39
DDB1-207ENST00000535967 DR1Q01658 176 aa12.61□□□□□ -0.39
DDB1-207ENST00000535967 GPS1Q13098 491 aa12.61□□□□□ -0.39
DDB1-207ENST00000535967 OLIG2Q13516 323 aa12.61□□□□□ -0.39
DDB1-207ENST00000535967 INPP5AQ14642 412 aa12.61□□□□□ -0.39
DDB1-207ENST00000535967 NFATC4Q14934 902 aa12.61□□□□□ -0.39
DDB1-207ENST00000535967 WHAMMP3Q1A5X7 153 aa12.61□□□□□ -0.39
DDB1-207ENST00000535967 KIF19Q2TAC6 998 aa12.61□□□□□ -0.39
DDB1-207ENST00000535967 TUSC1Q2TAM9 212 aa12.61□□□□□ -0.39
DDB1-207ENST00000535967 PDPK2PQ6A1A2 396 aa12.61□□□□□ -0.39
DDB1-207ENST00000535967 RAET1GQ6H3X3 334 aa12.61□□□□□ -0.39
DDB1-207ENST00000535967 PNCKQ6P2M8 343 aa12.61□□□□□ -0.39
DDB1-207ENST00000535967 TMPRSS7Q7RTY8 843 aa12.61□□□□□ -0.39
DDB1-207ENST00000535967 PARGQ86W56 976 aa12.61□□□□□ -0.39
DDB1-207ENST00000535967 KLHL7Q8IXQ5 586 aa12.61□□□□□ -0.39
DDB1-207ENST00000535967 SLC22A18ASQ8N1D0 253 aa12.61□□□□□ -0.39
DDB1-207ENST00000535967 KIF18AQ8NI77 898 aa12.61□□□□□ -0.39
DDB1-207ENST00000535967 DTX3LQ8TDB6 740 aa12.61□□□□□ -0.39
DDB1-207ENST00000535967 EID2BQ96D98 161 aa12.61□□□□□ -0.39
DDB1-207ENST00000535967 ZSCAN5AQ9BUG6 496 aa12.61□□□□□ -0.39
DDB1-207ENST00000535967 APOOQ9BUR5 198 aa12.61□□□□□ -0.39
DDB1-207ENST00000535967 WDR26Q9H7D7 661 aa12.61□□□□□ -0.39
DDB1-207ENST00000535967 CASS4Q9NQ75 786 aa12.61□□□□□ -0.39
DDB1-207ENST00000535967 PHPT1Q9NRX4 125 aaPredicted RBP12.61□□□□□ -0.39
DDB1-207ENST00000535967 PKP3Q9Y446 797 aa12.61□□□□□ -0.39
DDB1-207ENST00000535967 CACNB4O00305 520 aaPredicted RBP12.6□□□□□ -0.39
DDB1-207ENST00000535967 URI1O94763 535 aaPredicted RBP12.6□□□□□ -0.39
DDB1-207ENST00000535967 MYCLP1P12525 358 aaPredicted RBP12.6□□□□□ -0.39
DDB1-207ENST00000535967 LPOP22079 712 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms