RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 LCMT1Q9UIC8 334 aa11.13□□□□□ -0.63
CLSTN3-206ENST00000535668 SEC16AO15027 2179 aa11.12□□□□□ -0.63
CLSTN3-206ENST00000535668 CHUKO15111 745 aa11.12□□□□□ -0.63
CLSTN3-206ENST00000535668 ATMINO43313 823 aaPredicted RBP11.12□□□□□ -0.63
CLSTN3-206ENST00000535668 DUX1O43812 170 aa11.12□□□□□ -0.63
CLSTN3-206ENST00000535668 NUAK1O60285 661 aa11.12□□□□□ -0.63
CLSTN3-206ENST00000535668 CYP1A2P05177 515 aa11.12□□□□□ -0.63
CLSTN3-206ENST00000535668 F3P13726 295 aa11.12□□□□□ -0.63
CLSTN3-206ENST00000535668 LIFP15018 202 aa11.12□□□□□ -0.63
CLSTN3-206ENST00000535668 TCF4P15884 667 aa11.12□□□□□ -0.63
CLSTN3-206ENST00000535668 XRCC1P18887 633 aaPredicted RBP11.12□□□□□ -0.63
CLSTN3-206ENST00000535668 CCR10P46092 362 aa11.12□□□□□ -0.63
CLSTN3-206ENST00000535668 CD97P48960 835 aa11.12□□□□□ -0.63
CLSTN3-206ENST00000535668 POLD2P49005 469 aa11.12□□□□□ -0.63
CLSTN3-206ENST00000535668 POLE2P56282 527 aa11.12□□□□□ -0.63
CLSTN3-206ENST00000535668 DCDC1P59894 354 aa11.12□□□□□ -0.63
CLSTN3-206ENST00000535668 FOXK1P85037 733 aa11.12□□□□□ -0.63
CLSTN3-206ENST00000535668 KCNAB2Q13303 367 aa11.12□□□□□ -0.63
CLSTN3-206ENST00000535668 NR1I3Q14994 352 aa11.12□□□□□ -0.63
CLSTN3-206ENST00000535668 TIGD7Q6NT04 549 aaPredicted RBP11.12□□□□□ -0.63
CLSTN3-206ENST00000535668 CEACAM20Q6UY09 585 aa11.12□□□□□ -0.63
CLSTN3-206ENST00000535668 WASH2PQ6VEQ5 465 aa11.12□□□□□ -0.63
CLSTN3-206ENST00000535668 LYSMD3Q7Z3D4 306 aa11.12□□□□□ -0.63
CLSTN3-206ENST00000535668 PRICKLE2Q7Z3G6 844 aa11.12□□□□□ -0.63
CLSTN3-206ENST00000535668 GALNT13Q8IUC8 556 aa11.12□□□□□ -0.63
CLSTN3-206ENST00000535668 NLGN4XQ8N0W4 816 aa11.12□□□□□ -0.63
CLSTN3-206ENST00000535668 RCBTB1Q8NDN9 531 aa11.12□□□□□ -0.63
CLSTN3-206ENST00000535668 NLGN4YQ8NFZ3 816 aaPredicted RBP11.12□□□□□ -0.63
CLSTN3-206ENST00000535668 SCAMP4Q969E2 229 aa11.12□□□□□ -0.63
CLSTN3-206ENST00000535668 TADA1Q96BN2 335 aa11.12□□□□□ -0.63
CLSTN3-206ENST00000535668 ZNF670Q9BS34 389 aa11.12□□□□□ -0.63
CLSTN3-206ENST00000535668 RAB33BQ9H082 229 aa11.12□□□□□ -0.63
CLSTN3-206ENST00000535668 NAT10Q9H0A0 1025 aaKnown RBP11.12□□□□□ -0.63
CLSTN3-206ENST00000535668 CARD9Q9H257 536 aa11.12□□□□□ -0.63
CLSTN3-206ENST00000535668 WASH6PQ9NQA3 447 aa11.12□□□□□ -0.63
CLSTN3-206ENST00000535668 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.12□□□□□ -0.63
CLSTN3-206ENST00000535668 OCIAD1Q9NX40 245 aa11.12□□□□□ -0.63
CLSTN3-206ENST00000535668 SLC39A1Q9NY26 324 aa11.12□□□□□ -0.63
CLSTN3-206ENST00000535668 EPHA6Q9UF33 1036 aa11.12□□□□□ -0.63
CLSTN3-206ENST00000535668 IP6K2Q9UHH9 426 aa11.12□□□□□ -0.63
CLSTN3-206ENST00000535668 NENFQ9UMX5 172 aa11.12□□□□□ -0.63
CLSTN3-206ENST00000535668 MYO9AB2RTY4 2548 aa11.12□□□□□ -0.63
CLSTN3-206ENST00000535668 SPENQ96T58 3664 aaKnown RBP11.11□□□□□ -0.63
CLSTN3-206ENST00000535668 A8MX80 341 aa11.11□□□□□ -0.63
CLSTN3-206ENST00000535668 ANKRD66B4E2M5 251 aa11.11□□□□□ -0.63
CLSTN3-206ENST00000535668 RAD1O60671 282 aa11.11□□□□□ -0.63
CLSTN3-206ENST00000535668 CA4P22748 312 aa11.11□□□□□ -0.63
CLSTN3-206ENST00000535668 PBX1P40424 430 aa11.11□□□□□ -0.63
CLSTN3-206ENST00000535668 SPINT3P49223 89 aa11.11□□□□□ -0.63
CLSTN3-206ENST00000535668 UBE2IP63279 158 aaKnown RBP11.11□□□□□ -0.63
CLSTN3-206ENST00000535668 TLE1Q04724 770 aa11.11□□□□□ -0.63
CLSTN3-206ENST00000535668 KLHL30Q0D2K2 578 aa11.11□□□□□ -0.63
CLSTN3-206ENST00000535668 PDK2Q15119 407 aa11.11□□□□□ -0.63
CLSTN3-206ENST00000535668 TCEA2Q15560 299 aa11.11□□□□□ -0.63
CLSTN3-206ENST00000535668 ASIC2Q16515 512 aa11.11□□□□□ -0.63
CLSTN3-206ENST00000535668 IFI16Q16666 785 aaKnown RBP11.11□□□□□ -0.63
CLSTN3-206ENST00000535668 COLEC12Q5KU26 742 aa11.11□□□□□ -0.63
CLSTN3-206ENST00000535668 TXNRD3NBQ6F5E7 133 aa11.11□□□□□ -0.63
CLSTN3-206ENST00000535668 IL22RA1Q8N6P7 574 aa11.11□□□□□ -0.63
CLSTN3-206ENST00000535668 ZNF653Q96CK0 615 aa11.11□□□□□ -0.63
CLSTN3-206ENST00000535668 FCRL4Q96PJ5 515 aa11.11□□□□□ -0.63
CLSTN3-206ENST00000535668 TMEM9Q9P0T7 183 aa11.11□□□□□ -0.63
CLSTN3-206ENST00000535668 PCDHGA6Q9Y5G7 932 aa11.11□□□□□ -0.63
CLSTN3-206ENST00000535668 CENPEQ02224 2701 aa11.11□□□□□ -0.63
CLSTN3-206ENST00000535668 ITPR2Q14571 2701 aa11.1□□□□□ -0.63
CLSTN3-206ENST00000535668 TTC24A2A3L6 582 aaPredicted RBP11.1□□□□□ -0.63
CLSTN3-206ENST00000535668 EML2O95834 649 aa11.1□□□□□ -0.63
CLSTN3-206ENST00000535668 MBD3O95983 291 aa11.1□□□□□ -0.63
CLSTN3-206ENST00000535668 NTRK1P04629 796 aa11.1□□□□□ -0.63
CLSTN3-206ENST00000535668 MX2P20592 715 aa11.1□□□□□ -0.63
CLSTN3-206ENST00000535668 ZNF165P49910 485 aa11.1□□□□□ -0.63
CLSTN3-206ENST00000535668 MAXP61244 160 aa11.1□□□□□ -0.63
CLSTN3-206ENST00000535668 CYP4F2P78329 520 aa11.1□□□□□ -0.63
CLSTN3-206ENST00000535668 HHEXQ03014 270 aa11.1□□□□□ -0.63
CLSTN3-206ENST00000535668 DPYSL3Q14195 570 aa11.1□□□□□ -0.63
CLSTN3-206ENST00000535668 IL11RAQ14626 422 aa11.1□□□□□ -0.63
CLSTN3-206ENST00000535668 AGAP9Q5VTM2 703 aa11.1□□□□□ -0.63
CLSTN3-206ENST00000535668 NKAIN2Q5VXU1 208 aa11.1□□□□□ -0.63
CLSTN3-206ENST00000535668 NCBP2-AS2Q69YL0 99 aa11.1□□□□□ -0.63
CLSTN3-206ENST00000535668 ABRAXAS1Q6UWZ7 409 aa11.1□□□□□ -0.63
CLSTN3-206ENST00000535668 RFLNAQ6ZTI6 216 aa11.1□□□□□ -0.63
CLSTN3-206ENST00000535668 TIPARPQ7Z3E1 657 aaKnown RBP11.1□□□□□ -0.63
CLSTN3-206ENST00000535668 SLC9B2Q86UD5 537 aa11.1□□□□□ -0.63
CLSTN3-206ENST00000535668 PLXDC1Q8IUK5 500 aa11.1□□□□□ -0.63
CLSTN3-206ENST00000535668 RBM12BQ8IXT5 1001 aaKnown RBP11.1□□□□□ -0.63
CLSTN3-206ENST00000535668 ESX1Q8N693 406 aa11.1□□□□□ -0.63
CLSTN3-206ENST00000535668 PDCD6IPQ8WUM4 868 aaKnown RBP11.1□□□□□ -0.63
CLSTN3-206ENST00000535668 APOBEC4Q8WW27 367 aaKnown RBP11.1□□□□□ -0.63
CLSTN3-206ENST00000535668 HDAC11Q96DB2 347 aa11.1□□□□□ -0.63
CLSTN3-206ENST00000535668 AGAP2Q99490 1192 aa11.1□□□□□ -0.63
CLSTN3-206ENST00000535668 SLC38A3Q99624 504 aa11.1□□□□□ -0.63
CLSTN3-206ENST00000535668 RIOK2Q9BVS4 552 aaKnown RBP11.1□□□□□ -0.63
CLSTN3-206ENST00000535668 TBC1D29Q9UFV1 150 aa11.1□□□□□ -0.63
CLSTN3-206ENST00000535668 MOSPD1Q9UJG1 213 aa11.1□□□□□ -0.63
CLSTN3-206ENST00000535668 PLEKHM1Q9Y4G2 1056 aa11.1□□□□□ -0.63
CLSTN3-206ENST00000535668 PCYT1BQ9Y5K3 369 aaPredicted RBP11.1□□□□□ -0.63
CLSTN3-206ENST00000535668 EFCAB7A8K855 629 aa11.09□□□□□ -0.63
CLSTN3-206ENST00000535668 SMTNL1A8MU46 457 aa11.09□□□□□ -0.63
CLSTN3-206ENST00000535668 TMCO5BA8MYB1 307 aa11.09□□□□□ -0.63
CLSTN3-206ENST00000535668 MYO1FO00160 1098 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms