RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-205	ENST00000535375	IPO7	O95373	1038 aa	Known RBP	4.95	□□□□□ -1.62
PRKDC-205	ENST00000535375	POLR2C	P19387	275 aa	Predicted RBP	4.95	□□□□□ -1.62
PRKDC-205	ENST00000535375	UBA1	P22314	1058 aa	Known RBP	4.95	□□□□□ -1.62
PRKDC-205	ENST00000535375	TCEA1	P23193	301 aa	Known RBP	4.95	□□□□□ -1.62
PRKDC-205	ENST00000535375	TBX2	Q13207	712 aa	Predicted RBP	4.95	□□□□□ -1.62
PRKDC-205	ENST00000535375	DMP1	Q13316	513 aa	Predicted RBP	4.95	□□□□□ -1.62
PRKDC-205	ENST00000535375	DECR1	Q16698	335 aa		4.95	□□□□□ -1.62
PRKDC-205	ENST00000535375	MEX3B	Q6ZN04	569 aa	Known RBP	4.95	□□□□□ -1.62
PRKDC-205	ENST00000535375	ASB18	Q6ZVZ8	466 aa		4.95	□□□□□ -1.62
PRKDC-205	ENST00000535375	FOXP4	Q8IVH2	680 aa	Predicted RBP	4.95	□□□□□ -1.62
PRKDC-205	ENST00000535375	SRBD1	Q8N5C6	995 aa	Known RBP	4.95	□□□□□ -1.62
PRKDC-205	ENST00000535375	PCYOX1L	Q8NBM8	494 aa		4.95	□□□□□ -1.62
PRKDC-205	ENST00000535375	TMEM116	Q8NCL8	245 aa		4.95	□□□□□ -1.62
PRKDC-205	ENST00000535375	RFFL	Q8WZ73	363 aa		4.95	□□□□□ -1.62
PRKDC-205	ENST00000535375	PCYT2	Q99447	389 aa		4.95	□□□□□ -1.62
PRKDC-205	ENST00000535375	POLR3C	Q9BUI4	534 aa	Predicted RBP	4.95	□□□□□ -1.62
PRKDC-205	ENST00000535375	ZNF334	Q9HCZ1	680 aa	Predicted RBP	4.95	□□□□□ -1.62
PRKDC-205	ENST00000535375	LTB4R2	Q9NPC1	389 aa		4.95	□□□□□ -1.62
PRKDC-205	ENST00000535375	OR14J1	Q9UGF5	321 aa		4.95	□□□□□ -1.62
PRKDC-205	ENST00000535375	FAF1	Q9UNN5	650 aa	Predicted RBP	4.95	□□□□□ -1.62
PRKDC-205	ENST00000535375	DOCK7	Q96N67	2140 aa		4.94	□□□□□ -1.62
PRKDC-205	ENST00000535375		M0QZ24	198 aa		4.94	□□□□□ -1.62
PRKDC-205	ENST00000535375	ZNHIT1	O43257	154 aa		4.94	□□□□□ -1.62
PRKDC-205	ENST00000535375	PAGE4	O60829	102 aa		4.94	□□□□□ -1.62
PRKDC-205	ENST00000535375	PLG	P00747	810 aa	Predicted RBP	4.94	□□□□□ -1.62
PRKDC-205	ENST00000535375	ICAM3	P32942	547 aa		4.94	□□□□□ -1.62
PRKDC-205	ENST00000535375	BSG	P35613	385 aa		4.94	□□□□□ -1.62
PRKDC-205	ENST00000535375	HOXA1	P49639	335 aa	Predicted RBP	4.94	□□□□□ -1.62
PRKDC-205	ENST00000535375	F2RL1	P55085	397 aa		4.94	□□□□□ -1.62
PRKDC-205	ENST00000535375	CSTF3	Q12996	717 aa	Known RBP	4.94	□□□□□ -1.62
PRKDC-205	ENST00000535375	KRTAP24-1	Q3LI83	254 aa		4.94	□□□□□ -1.62
PRKDC-205	ENST00000535375	PMS2CL	Q68D20	193 aa		4.94	□□□□□ -1.62
PRKDC-205	ENST00000535375	C18orf63	Q68DL7	685 aa		4.94	□□□□□ -1.62
PRKDC-205	ENST00000535375	ZNF280D	Q6N043	979 aa		4.94	□□□□□ -1.62
PRKDC-205	ENST00000535375	C19orf48	Q6RUI8	117 aa		4.94	□□□□□ -1.62
PRKDC-205	ENST00000535375	GSG1L	Q6UXU4	331 aa		4.94	□□□□□ -1.62
PRKDC-205	ENST00000535375	NFE4	Q86UQ8	179 aa		4.94	□□□□□ -1.62
PRKDC-205	ENST00000535375	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	4.94	□□□□□ -1.62
PRKDC-205	ENST00000535375	THAP6	Q8TBB0	222 aa		4.94	□□□□□ -1.62
PRKDC-205	ENST00000535375	RHBDF1	Q96CC6	855 aa		4.94	□□□□□ -1.62
PRKDC-205	ENST00000535375	ARHGEF26	Q96DR7	871 aa		4.94	□□□□□ -1.62
PRKDC-205	ENST00000535375	PPM1M	Q96MI6	270 aa		4.94	□□□□□ -1.62
PRKDC-205	ENST00000535375	NEURL2	Q9BR09	285 aa		4.94	□□□□□ -1.62
PRKDC-205	ENST00000535375	SIL1	Q9H173	461 aa		4.94	□□□□□ -1.62
PRKDC-205	ENST00000535375	RANGRF	Q9HD47	186 aa	Predicted RBP	4.94	□□□□□ -1.62
PRKDC-205	ENST00000535375	FAM118A	Q9NWS6	357 aa		4.94	□□□□□ -1.62
PRKDC-205	ENST00000535375	C1orf226	A1L170	272 aa		4.93	□□□□□ -1.62
PRKDC-205	ENST00000535375	FAM72C	H0Y354	149 aa		4.93	□□□□□ -1.62
PRKDC-205	ENST00000535375	TGFB1I1	O43294	461 aa		4.93	□□□□□ -1.62
PRKDC-205	ENST00000535375	CREB3	O43889	395 aa		4.93	□□□□□ -1.62
PRKDC-205	ENST00000535375	SLC22A3	O75751	556 aa		4.93	□□□□□ -1.62
PRKDC-205	ENST00000535375	CCNDBP1	O95273	360 aa		4.93	□□□□□ -1.62
PRKDC-205	ENST00000535375	PRSS1	P07477	247 aa		4.93	□□□□□ -1.62
PRKDC-205	ENST00000535375	MARK3	P27448	753 aa		4.93	□□□□□ -1.62
PRKDC-205	ENST00000535375	PRCP	P42785	496 aa		4.93	□□□□□ -1.62
PRKDC-205	ENST00000535375	ZBED6	P86452	979 aa		4.93	□□□□□ -1.62
PRKDC-205	ENST00000535375	PLIN5	Q00G26	463 aa		4.93	□□□□□ -1.62
PRKDC-205	ENST00000535375	FAM72A	Q5TYM5	149 aa		4.93	□□□□□ -1.62
PRKDC-205	ENST00000535375	JAKMIP3	Q5VZ66	844 aa		4.93	□□□□□ -1.62
PRKDC-205	ENST00000535375	FAM72D	Q6L9T8	149 aa		4.93	□□□□□ -1.62
PRKDC-205	ENST00000535375	FAM171B	Q6P995	826 aa		4.93	□□□□□ -1.62
PRKDC-205	ENST00000535375	ZNF852	Q6ZMS4	543 aa		4.93	□□□□□ -1.62
PRKDC-205	ENST00000535375	TMPRSS12	Q86WS5	348 aa		4.93	□□□□□ -1.62
PRKDC-205	ENST00000535375	FAM72B	Q86X60	149 aa		4.93	□□□□□ -1.62
PRKDC-205	ENST00000535375	MAP7D3	Q8IWC1	876 aa		4.93	□□□□□ -1.62
PRKDC-205	ENST00000535375	FRMD1	Q8N878	549 aa		4.93	□□□□□ -1.62
PRKDC-205	ENST00000535375	ACVR1C	Q8NER5	493 aa		4.93	□□□□□ -1.62
PRKDC-205	ENST00000535375	KCNG4	Q8TDN1	519 aa		4.93	□□□□□ -1.62
PRKDC-205	ENST00000535375	SLC38A5	Q8WUX1	472 aa		4.93	□□□□□ -1.62
PRKDC-205	ENST00000535375	SGCD	Q92629	289 aa		4.93	□□□□□ -1.62
PRKDC-205	ENST00000535375	PPP1R13B	Q96KQ4	1090 aa		4.93	□□□□□ -1.62
PRKDC-205	ENST00000535375	SCPEP1	Q9HB40	452 aa		4.93	□□□□□ -1.62
PRKDC-205	ENST00000535375	MAP3K20	Q9NYL2	800 aa	Known RBP	4.93	□□□□□ -1.62
PRKDC-205	ENST00000535375	LIMA1	Q9UHB6	759 aa	Known RBP	4.93	□□□□□ -1.62
PRKDC-205	ENST00000535375	ERRFI1	Q9UJM3	462 aa	Predicted RBP	4.93	□□□□□ -1.62
PRKDC-205	ENST00000535375	KCNE2	Q9Y6J6	123 aa		4.93	□□□□□ -1.62
PRKDC-205	ENST00000535375	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		4.92	□□□□□ -1.62
PRKDC-205	ENST00000535375	CCDC189	A1A4V9	331 aa		4.92	□□□□□ -1.62
PRKDC-205	ENST00000535375	PRSS47	A8MTI9	375 aa		4.92	□□□□□ -1.62
PRKDC-205	ENST00000535375	MLYCD	O95822	493 aa		4.92	□□□□□ -1.62
PRKDC-205	ENST00000535375	FAM106CP	P0CH98	169 aa		4.92	□□□□□ -1.62
PRKDC-205	ENST00000535375	PBX3	P40426	434 aa		4.92	□□□□□ -1.62
PRKDC-205	ENST00000535375	RPS3A	P61247	264 aa	Known RBP	4.92	□□□□□ -1.62
PRKDC-205	ENST00000535375	CDC16	Q13042	620 aa		4.92	□□□□□ -1.62
PRKDC-205	ENST00000535375	PDE1C	Q14123	709 aa	Predicted RBP	4.92	□□□□□ -1.62
PRKDC-205	ENST00000535375	NAB2	Q15742	525 aa		4.92	□□□□□ -1.62
PRKDC-205	ENST00000535375	TBCE	Q15813	527 aa	Predicted RBP	4.92	□□□□□ -1.62
PRKDC-205	ENST00000535375	TST	Q16762	297 aa	Known RBP	4.92	□□□□□ -1.62
PRKDC-205	ENST00000535375	PNLIPRP3	Q17RR3	467 aa		4.92	□□□□□ -1.62
PRKDC-205	ENST00000535375	CDON	Q4KMG0	1287 aa		4.92	□□□□□ -1.62
PRKDC-205	ENST00000535375	OR7E24	Q6IFN5	339 aa		4.92	□□□□□ -1.62
PRKDC-205	ENST00000535375	ZNF704	Q6ZNC4	412 aa	Predicted RBP	4.92	□□□□□ -1.62
PRKDC-205	ENST00000535375	OR5R1	Q8NH85	324 aa		4.92	□□□□□ -1.62
PRKDC-205	ENST00000535375	FBXO17	Q96EF6	278 aa		4.92	□□□□□ -1.62
PRKDC-205	ENST00000535375	LRMDA	Q9H2I8	198 aa		4.92	□□□□□ -1.62
PRKDC-205	ENST00000535375	UNC45A	Q9H3U1	944 aa		4.92	□□□□□ -1.62
PRKDC-205	ENST00000535375	EHD2	Q9NZN4	543 aa		4.92	□□□□□ -1.62
PRKDC-205	ENST00000535375	CWC15	Q9P013	229 aa	Known RBP	4.92	□□□□□ -1.62
PRKDC-205	ENST00000535375	UBA2	Q9UBT2	640 aa	Predicted RBP	4.92	□□□□□ -1.62
PRKDC-205	ENST00000535375	STK39	Q9UEW8	545 aa		4.92	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms