RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 MAP7Q14244 749 aa14.8□□□□□ -0.04
CTSB-230ENST00000534149 ERV3-1Q14264 604 aa14.8□□□□□ -0.04
CTSB-230ENST00000534149 PLEKHA7Q6IQ23 1121 aa14.8□□□□□ -0.04
CTSB-230ENST00000534149 TCTN3Q6NUS6 607 aa14.8□□□□□ -0.04
CTSB-230ENST00000534149 IYDQ6PHW0 289 aa14.8□□□□□ -0.04
CTSB-230ENST00000534149 ZNF765Q7L2R6 523 aa14.8□□□□□ -0.04
CTSB-230ENST00000534149 ATPAF2Q8N5M1 289 aa14.8□□□□□ -0.04
CTSB-230ENST00000534149 SH3KBP1Q96B97 665 aa14.8□□□□□ -0.04
CTSB-230ENST00000534149 RIOK2Q9BVS4 552 aaKnown RBP14.8□□□□□ -0.04
CTSB-230ENST00000534149 NUP62CLQ9H1M0 184 aa14.8□□□□□ -0.04
CTSB-230ENST00000534149 ZWILCHQ9H900 591 aa14.8□□□□□ -0.04
CTSB-230ENST00000534149 CNOT8Q9UFF9 292 aaKnown RBP14.8□□□□□ -0.04
CTSB-230ENST00000534149 CROTQ9UKG9 612 aa14.8□□□□□ -0.04
CTSB-230ENST00000534149 PCDHB3Q9Y5E6 796 aa14.8□□□□□ -0.04
CTSB-230ENST00000534149 A6NCN8 305 aa14.79□□□□□ -0.04
CTSB-230ENST00000534149 TMEM191CA6NGB0 347 aa14.79□□□□□ -0.04
CTSB-230ENST00000534149 H3BRJ5 948 aa14.79□□□□□ -0.04
CTSB-230ENST00000534149 LRCH4O75427 683 aa14.79□□□□□ -0.04
CTSB-230ENST00000534149 ACP5P13686 325 aa14.79□□□□□ -0.04
CTSB-230ENST00000534149 ZNF135P52742 658 aaPredicted RBP14.79□□□□□ -0.04
CTSB-230ENST00000534149 GFERP55789 205 aa14.79□□□□□ -0.04
CTSB-230ENST00000534149 MN1Q10571 1320 aaPredicted RBP14.79□□□□□ -0.04
CTSB-230ENST00000534149 SMTNL2Q2TAL5 461 aa14.79□□□□□ -0.04
CTSB-230ENST00000534149 CT47A1Q5JQC4 288 aaPredicted RBP14.79□□□□□ -0.04
CTSB-230ENST00000534149 RALGPS1Q5JS13 557 aa14.79□□□□□ -0.04
CTSB-230ENST00000534149 TMCO3Q6UWJ1 677 aa14.79□□□□□ -0.04
CTSB-230ENST00000534149 ASB18Q6ZVZ8 466 aa14.79□□□□□ -0.04
CTSB-230ENST00000534149 TMEM135Q86UB9 458 aa14.79□□□□□ -0.04
CTSB-230ENST00000534149 SLC9B2Q86UD5 537 aa14.79□□□□□ -0.04
CTSB-230ENST00000534149 PSTKQ8IV42 348 aaKnown RBP14.79□□□□□ -0.04
CTSB-230ENST00000534149 CCDC13Q8IYE1 715 aa14.79□□□□□ -0.04
CTSB-230ENST00000534149 GALNT6Q8NCL4 622 aa14.79□□□□□ -0.04
CTSB-230ENST00000534149 EXD1Q8NHP7 514 aa14.79□□□□□ -0.04
CTSB-230ENST00000534149 NSMCE1Q8WV22 266 aa14.79□□□□□ -0.04
CTSB-230ENST00000534149 NT5MQ9NPB1 228 aa14.79□□□□□ -0.04
CTSB-230ENST00000534149 PLEKHB1Q9UF11 243 aaPredicted RBP14.79□□□□□ -0.04
CTSB-230ENST00000534149 TNRC6AQ8NDV7 1962 aaKnown RBP14.78□□□□□ -0.04
CTSB-230ENST00000534149 A0A0J9YYE9 177 aa14.78□□□□□ -0.04
CTSB-230ENST00000534149 LGALS16A8MUM7 142 aa14.78□□□□□ -0.04
CTSB-230ENST00000534149 FZD6O60353 706 aa14.78□□□□□ -0.04
CTSB-230ENST00000534149 KATNA1O75449 491 aa14.78□□□□□ -0.04
CTSB-230ENST00000534149 RFPL1O75677 317 aa14.78□□□□□ -0.04
CTSB-230ENST00000534149 TRBC1P01850 177 aa14.78□□□□□ -0.04
CTSB-230ENST00000534149 PYGLP06737 847 aa14.78□□□□□ -0.04
CTSB-230ENST00000534149 ZNF30P17039 623 aa14.78□□□□□ -0.04
CTSB-230ENST00000534149 IL1R2P27930 398 aa14.78□□□□□ -0.04
CTSB-230ENST00000534149 ARL4AP40617 200 aa14.78□□□□□ -0.04
CTSB-230ENST00000534149 STC1P52823 247 aa14.78□□□□□ -0.04
CTSB-230ENST00000534149 EPHB1P54762 984 aa14.78□□□□□ -0.04
CTSB-230ENST00000534149 MARC1Q5VT66 337 aa14.78□□□□□ -0.04
CTSB-230ENST00000534149 C6orf15Q6UXA7 325 aaPredicted RBP14.78□□□□□ -0.04
CTSB-230ENST00000534149 NLRP8Q86W28 1048 aa14.78□□□□□ -0.04
CTSB-230ENST00000534149 NDUFAF2Q8N183 169 aa14.78□□□□□ -0.04
CTSB-230ENST00000534149 HERPUD2Q9BSE4 406 aa14.78□□□□□ -0.04
CTSB-230ENST00000534149 SYT11Q9BT88 431 aa14.78□□□□□ -0.04
CTSB-230ENST00000534149 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.78□□□□□ -0.04
CTSB-230ENST00000534149 PRDM8Q9NQV8 689 aa14.78□□□□□ -0.04
CTSB-230ENST00000534149 FANCLQ9NW38 375 aa14.78□□□□□ -0.04
CTSB-230ENST00000534149 VPS18Q9P253 973 aa14.78□□□□□ -0.04
CTSB-230ENST00000534149 CPNE7Q9UBL6 633 aa14.78□□□□□ -0.04
CTSB-230ENST00000534149 TLK1Q9UKI8 766 aa14.78□□□□□ -0.04
CTSB-230ENST00000534149 POLHQ9Y253 713 aa14.78□□□□□ -0.04
CTSB-230ENST00000534149 KIR2DS5A0A0G2JLQ3 304 aa14.77□□□□□ -0.05
CTSB-230ENST00000534149 A0A0G2JNG1 304 aa14.77□□□□□ -0.05
CTSB-230ENST00000534149 CDC14CA4D256 554 aa14.77□□□□□ -0.05
CTSB-230ENST00000534149 LILRA5A6NI73 299 aa14.77□□□□□ -0.05
CTSB-230ENST00000534149 KIR2DS3K7RE56 304 aa14.77□□□□□ -0.05
CTSB-230ENST00000534149 KIAA0754O94854 1291 aa14.77□□□□□ -0.05
CTSB-230ENST00000534149 AGFG2O95081 481 aa14.77□□□□□ -0.05
CTSB-230ENST00000534149 PDGFAP04085 211 aa14.77□□□□□ -0.05
CTSB-230ENST00000534149 ANKRD34CP0C6C1 535 aa14.77□□□□□ -0.05
CTSB-230ENST00000534149 F3P13726 295 aa14.77□□□□□ -0.05
CTSB-230ENST00000534149 SLC2A4P14672 509 aa14.77□□□□□ -0.05
CTSB-230ENST00000534149 TCF4P15884 667 aa14.77□□□□□ -0.05
CTSB-230ENST00000534149 FERP16591 822 aa14.77□□□□□ -0.05
CTSB-230ENST00000534149 GNLYP22749 145 aa14.77□□□□□ -0.05
CTSB-230ENST00000534149 CDH6P55285 790 aa14.77□□□□□ -0.05
CTSB-230ENST00000534149 SH3BP2P78314 561 aa14.77□□□□□ -0.05
CTSB-230ENST00000534149 UBXN1Q04323 297 aa14.77□□□□□ -0.05
CTSB-230ENST00000534149 ITKQ08881 620 aa14.77□□□□□ -0.05
CTSB-230ENST00000534149 KIR2DS5Q14953 304 aa14.77□□□□□ -0.05
CTSB-230ENST00000534149 DPYSL2Q16555 572 aa14.77□□□□□ -0.05
CTSB-230ENST00000534149 LYSMD3Q7Z3D4 306 aa14.77□□□□□ -0.05
CTSB-230ENST00000534149 POLNQ7Z5Q5 900 aa14.77□□□□□ -0.05
CTSB-230ENST00000534149 PLXDC1Q8IUK5 500 aa14.77□□□□□ -0.05
CTSB-230ENST00000534149 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.77□□□□□ -0.05
CTSB-230ENST00000534149 HSPH1Q92598 858 aa14.77□□□□□ -0.05
CTSB-230ENST00000534149 STAMBPL1Q96FJ0 436 aa14.77□□□□□ -0.05
CTSB-230ENST00000534149 ELMO2Q96JJ3 720 aa14.77□□□□□ -0.05
CTSB-230ENST00000534149 C9orf72Q96LT7 481 aa14.77□□□□□ -0.05
CTSB-230ENST00000534149 CSPG4P5Q96PW8 444 aa14.77□□□□□ -0.05
CTSB-230ENST00000534149 WDR24Q96S15 920 aa14.77□□□□□ -0.05
CTSB-230ENST00000534149 EPB41L1Q9H4G0 881 aa14.77□□□□□ -0.05
CTSB-230ENST00000534149 OGFRQ9NZT2 677 aa14.77□□□□□ -0.05
CTSB-230ENST00000534149 CNOT6Q9ULM6 557 aaKnown RBP14.77□□□□□ -0.05
CTSB-230ENST00000534149 CREBBPQ92793 2442 aa14.77□□□□□ -0.05
CTSB-230ENST00000534149 FADS2P1A8MWK0 482 aa14.76□□□□□ -0.05
CTSB-230ENST00000534149 VPS4BO75351 444 aa14.76□□□□□ -0.05
CTSB-230ENST00000534149 CLDN7O95471 211 aa14.76□□□□□ -0.05
CTSB-230ENST00000534149 C9P02748 559 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms