RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 FUOMA2VDF0 154 aa19.25■□□□□ 0.67
CAPN1-226ENST00000533820 FXYD1O00168 92 aa19.25■□□□□ 0.67
CAPN1-226ENST00000533820 SLC6A2P23975 617 aa19.25■□□□□ 0.67
CAPN1-226ENST00000533820 NFYCQ13952 458 aa19.25■□□□□ 0.67
CAPN1-226ENST00000533820 MANEALQ5VSG8 457 aa19.25■□□□□ 0.67
CAPN1-226ENST00000533820 GPR107Q5VW38 600 aa19.25■□□□□ 0.67
CAPN1-226ENST00000533820 ERI1Q8IV48 349 aaKnown RBP19.25■□□□□ 0.67
CAPN1-226ENST00000533820 SEMA3CQ99985 751 aa19.25■□□□□ 0.67
CAPN1-226ENST00000533820 MRM3Q9HC36 420 aaKnown RBP19.25■□□□□ 0.67
CAPN1-226ENST00000533820 CCM2LQ9NUG4 571 aaPredicted RBP19.25■□□□□ 0.67
CAPN1-226ENST00000533820 MIA3Q5JRA6 1907 aa19.25■□□□□ 0.67
CAPN1-226ENST00000533820 CCDC162PA2VCL2 907 aa19.25■□□□□ 0.67
CAPN1-226ENST00000533820 ENPP3O14638 875 aa19.25■□□□□ 0.67
CAPN1-226ENST00000533820 KPNA6O60684 536 aa19.25■□□□□ 0.67
CAPN1-226ENST00000533820 CLASP2O75122 1294 aaKnown RBP19.25■□□□□ 0.67
CAPN1-226ENST00000533820 PEX11BO96011 259 aa19.25■□□□□ 0.67
CAPN1-226ENST00000533820 MMP2P08253 660 aa19.25■□□□□ 0.67
CAPN1-226ENST00000533820 CD1DP15813 335 aa19.25■□□□□ 0.67
CAPN1-226ENST00000533820 FASP25445 335 aa19.25■□□□□ 0.67
CAPN1-226ENST00000533820 EEF1DP29692 281 aaKnown RBP19.25■□□□□ 0.67
CAPN1-226ENST00000533820 ESRRGP62508 458 aa19.25■□□□□ 0.67
CAPN1-226ENST00000533820 ZNF33AQ06730 810 aa19.25■□□□□ 0.67
CAPN1-226ENST00000533820 NEDD8Q15843 81 aa19.25■□□□□ 0.67
CAPN1-226ENST00000533820 ZIK1Q3SY52 487 aaPredicted RBP19.25■□□□□ 0.67
CAPN1-226ENST00000533820 BORAQ6PGQ7 559 aa19.25■□□□□ 0.67
CAPN1-226ENST00000533820 KLHDC8BQ8IXV7 354 aa19.25■□□□□ 0.67
CAPN1-226ENST00000533820 PGBD5Q8N414 524 aa19.25■□□□□ 0.67
CAPN1-226ENST00000533820 POLG2Q9UHN1 485 aa19.25■□□□□ 0.67
CAPN1-226ENST00000533820 PADI4Q9UM07 663 aa19.25■□□□□ 0.67
CAPN1-226ENST00000533820 SLC8A2Q9UPR5 921 aa19.25■□□□□ 0.67
CAPN1-226ENST00000533820 ZNF236Q9UL36 1845 aa19.25■□□□□ 0.67
CAPN1-226ENST00000533820 CLOCKO15516 846 aa19.24■□□□□ 0.67
CAPN1-226ENST00000533820 BMP2P12643 396 aa19.24■□□□□ 0.67
CAPN1-226ENST00000533820 AGTR2P50052 363 aa19.24■□□□□ 0.67
CAPN1-226ENST00000533820 MLLT6P55198 1093 aaPredicted RBP19.24■□□□□ 0.67
CAPN1-226ENST00000533820 MERTKQ12866 999 aa19.24■□□□□ 0.67
CAPN1-226ENST00000533820 INPP5AQ14642 412 aa19.24■□□□□ 0.67
CAPN1-226ENST00000533820 SLC39A12Q504Y0 691 aa19.24■□□□□ 0.67
CAPN1-226ENST00000533820 BRMS1LQ5PSV4 323 aa19.24■□□□□ 0.67
CAPN1-226ENST00000533820 RAP1GAP2Q684P5 730 aa19.24■□□□□ 0.67
CAPN1-226ENST00000533820 CXCL17Q6UXB2 119 aa19.24■□□□□ 0.67
CAPN1-226ENST00000533820 CAMK1DQ8IU85 385 aa19.24■□□□□ 0.67
CAPN1-226ENST00000533820 ANKFN1Q8N957 763 aa19.24■□□□□ 0.67
CAPN1-226ENST00000533820 C12orf43Q96C57 262 aaKnown RBP19.24■□□□□ 0.67
CAPN1-226ENST00000533820 LRRC58Q96CX6 371 aa19.24■□□□□ 0.67
CAPN1-226ENST00000533820 CYP2S1Q96SQ9 504 aa19.24■□□□□ 0.67
CAPN1-226ENST00000533820 ACBD6Q9BR61 282 aa19.24■□□□□ 0.67
CAPN1-226ENST00000533820 NAA50Q9GZZ1 169 aaKnown RBP19.24■□□□□ 0.67
CAPN1-226ENST00000533820 TSPAN3O60637 253 aa19.24■□□□□ 0.67
CAPN1-226ENST00000533820 CBFA2T3O75081 653 aa19.24■□□□□ 0.67
CAPN1-226ENST00000533820 SOAT2O75908 522 aa19.24■□□□□ 0.67
CAPN1-226ENST00000533820 GLP2RO95838 553 aa19.24■□□□□ 0.67
CAPN1-226ENST00000533820 GRK4P32298 578 aa19.24■□□□□ 0.67
CAPN1-226ENST00000533820 LDLRAD1Q5T700 205 aa19.24■□□□□ 0.67
CAPN1-226ENST00000533820 FAM171BQ6P995 826 aa19.24■□□□□ 0.67
CAPN1-226ENST00000533820 ISOC1Q96CN7 298 aa19.24■□□□□ 0.67
CAPN1-226ENST00000533820 VPS50Q96JG6 964 aa19.24■□□□□ 0.67
CAPN1-226ENST00000533820 CEP44Q9C0F1 390 aa19.24■□□□□ 0.67
CAPN1-226ENST00000533820 EVLQ9UI08 416 aaPredicted RBP19.24■□□□□ 0.67
CAPN1-226ENST00000533820 A0A0U1RQS6 177 aa19.23■□□□□ 0.67
CAPN1-226ENST00000533820 GIPC1O14908 333 aa19.23■□□□□ 0.67
CAPN1-226ENST00000533820 CD3EAPO15446 510 aaKnown RBP19.23■□□□□ 0.67
CAPN1-226ENST00000533820 LDB2O43679 373 aa19.23■□□□□ 0.67
CAPN1-226ENST00000533820 CD52P31358 61 aa19.23■□□□□ 0.67
CAPN1-226ENST00000533820 FMO4P31512 558 aa19.23■□□□□ 0.67
CAPN1-226ENST00000533820 CYP2C18P33260 490 aa19.23■□□□□ 0.67
CAPN1-226ENST00000533820 MRPS6P82932 125 aaKnown RBP19.23■□□□□ 0.67
CAPN1-226ENST00000533820 ATP1A4Q13733 1029 aa19.23■□□□□ 0.67
CAPN1-226ENST00000533820 RAB44Q7Z6P3 723 aaPredicted RBP19.23■□□□□ 0.67
CAPN1-226ENST00000533820 SMOC2Q9H3U7 446 aa19.23■□□□□ 0.67
CAPN1-226ENST00000533820 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.23■□□□□ 0.67
CAPN1-226ENST00000533820 IKZF3Q9UKT9 509 aa19.23■□□□□ 0.67
CAPN1-226ENST00000533820 B4GAT1O43505 415 aa19.23■□□□□ 0.67
CAPN1-226ENST00000533820 MTHFD2P13995 350 aa19.23■□□□□ 0.67
CAPN1-226ENST00000533820 ACVRL1P37023 503 aa19.23■□□□□ 0.67
CAPN1-226ENST00000533820 ARTNQ5T4W7 220 aa19.23■□□□□ 0.67
CAPN1-226ENST00000533820 FAAH2Q6GMR7 532 aa19.23■□□□□ 0.67
CAPN1-226ENST00000533820 C8orf82Q6P1X6 216 aaPredicted RBP19.23■□□□□ 0.67
CAPN1-226ENST00000533820 RALGPS2Q86X27 583 aaPredicted RBP19.23■□□□□ 0.67
CAPN1-226ENST00000533820 EXOC2Q96KP1 924 aa19.23■□□□□ 0.67
CAPN1-226ENST00000533820 UHRF1Q96T88 793 aaPredicted RBP19.23■□□□□ 0.67
CAPN1-226ENST00000533820 SGIP1Q9BQI5 828 aa19.23■□□□□ 0.67
CAPN1-226ENST00000533820 ACADVLP49748 655 aa19.23■□□□□ 0.67
CAPN1-226ENST00000533820 TSPY1Q01534 308 aa19.23■□□□□ 0.67
CAPN1-226ENST00000533820 TSNQ15631 228 aaKnown RBP19.23■□□□□ 0.67
CAPN1-226ENST00000533820 TIGD2Q4W5G0 525 aa19.23■□□□□ 0.67
CAPN1-226ENST00000533820 PAGE3Q5JUK9 113 aa19.23■□□□□ 0.67
CAPN1-226ENST00000533820 C9orf131Q5VYM1 1079 aa19.23■□□□□ 0.67
CAPN1-226ENST00000533820 PAQR3Q6TCH7 311 aa19.23■□□□□ 0.67
CAPN1-226ENST00000533820 PEX5LQ8IYB4 626 aa19.23■□□□□ 0.67
CAPN1-226ENST00000533820 IGSF8Q969P0 613 aa19.23■□□□□ 0.67
CAPN1-226ENST00000533820 ROPN1LQ96C74 230 aa19.23■□□□□ 0.67
CAPN1-226ENST00000533820 PTPN18Q99952 460 aa19.23■□□□□ 0.67
CAPN1-226ENST00000533820 POLR1BQ9H9Y6 1135 aa19.23■□□□□ 0.67
CAPN1-226ENST00000533820 SLC7A4O43246 635 aa19.22■□□□□ 0.67
CAPN1-226ENST00000533820 SNAP29O95721 258 aa19.22■□□□□ 0.67
CAPN1-226ENST00000533820 OCM2P0CE71 109 aa19.22■□□□□ 0.67
CAPN1-226ENST00000533820 OCMP0CE72 109 aaPredicted RBP19.22■□□□□ 0.67
CAPN1-226ENST00000533820 NAT2P11245 290 aa19.22■□□□□ 0.67
CAPN1-226ENST00000533820 PCNAP12004 261 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms