RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 AARSD1Q9BTE6 412 aaKnown RBP17.48■□□□□ 0.39
PHRF1-205ENST00000533464 LRTM1Q9HBL6 345 aa17.48■□□□□ 0.39
PHRF1-205ENST00000533464 ZNF358Q9NW07 568 aa17.48■□□□□ 0.39
PHRF1-205ENST00000533464 CNTN3Q9P232 1028 aa17.48■□□□□ 0.39
PHRF1-205ENST00000533464 VPS4AQ9UN37 437 aa17.48■□□□□ 0.39
PHRF1-205ENST00000533464 ANGPT4Q9Y264 503 aa17.48■□□□□ 0.39
PHRF1-205ENST00000533464 ONECUT3O60422 494 aaPredicted RBP17.48■□□□□ 0.39
PHRF1-205ENST00000533464 FEN1P39748 380 aaKnown RBP17.48■□□□□ 0.39
PHRF1-205ENST00000533464 SLC1A2P43004 574 aa17.48■□□□□ 0.39
PHRF1-205ENST00000533464 ARMC4Q5T2S8 1044 aa17.48■□□□□ 0.39
PHRF1-205ENST00000533464 PGAM4Q8N0Y7 254 aa17.48■□□□□ 0.39
PHRF1-205ENST00000533464 CNTD1Q8N815 330 aa17.48■□□□□ 0.39
PHRF1-205ENST00000533464 MRPL48Q96GC5 212 aaKnown RBP17.48■□□□□ 0.39
PHRF1-205ENST00000533464 CADM1Q9BY67 442 aaKnown RBP17.48■□□□□ 0.39
PHRF1-205ENST00000533464 PNPLA3Q9NST1 481 aa17.48■□□□□ 0.39
PHRF1-205ENST00000533464 TBC1D14Q9P2M4 693 aa17.48■□□□□ 0.39
PHRF1-205ENST00000533464 DAPK2Q9UIK4 370 aa17.48■□□□□ 0.39
PHRF1-205ENST00000533464 CORO2BQ9UQ03 480 aa17.48■□□□□ 0.39
PHRF1-205ENST00000533464 SLC38A8A6NNN8 435 aa17.47■□□□□ 0.39
PHRF1-205ENST00000533464 POLR2JP52435 117 aaKnown RBP17.47■□□□□ 0.39
PHRF1-205ENST00000533464 EIF3MQ7L2H7 374 aaKnown RBP17.47■□□□□ 0.39
PHRF1-205ENST00000533464 SPPL2CQ8IUH8 684 aa17.47■□□□□ 0.39
PHRF1-205ENST00000533464 ZFP28Q8NHY6 868 aa17.47■□□□□ 0.39
PHRF1-205ENST00000533464 LPGAT1Q92604 370 aa17.47■□□□□ 0.39
PHRF1-205ENST00000533464 CAPNS2Q96L46 248 aa17.47■□□□□ 0.39
PHRF1-205ENST00000533464 B3GALT6Q96L58 329 aa17.47■□□□□ 0.39
PHRF1-205ENST00000533464 MAGEL2Q9UJ55 1249 aa17.47■□□□□ 0.39
PHRF1-205ENST00000533464 TSC22D4Q9Y3Q8 395 aa17.47■□□□□ 0.39
PHRF1-205ENST00000533464 GRIN2DO15399 1336 aa17.47■□□□□ 0.39
PHRF1-205ENST00000533464 KRT75O95678 551 aa17.47■□□□□ 0.39
PHRF1-205ENST00000533464 NR2F1P10589 423 aa17.47■□□□□ 0.39
PHRF1-205ENST00000533464 UQCRBP14927 111 aa17.47■□□□□ 0.39
PHRF1-205ENST00000533464 PROSER1Q86XN7 944 aa17.47■□□□□ 0.39
PHRF1-205ENST00000533464 NPLOC4Q8TAT6 608 aa17.47■□□□□ 0.39
PHRF1-205ENST00000533464 DEC1Q9P2X7 70 aa17.47■□□□□ 0.39
PHRF1-205ENST00000533464 LOC100506127A0A0U1RQW1 187 aa17.47■□□□□ 0.39
PHRF1-205ENST00000533464 FAM25AB3EWG3 89 aa17.47■□□□□ 0.39
PHRF1-205ENST00000533464 FAM25CB3EWG5 89 aa17.47■□□□□ 0.39
PHRF1-205ENST00000533464 FAM25GB3EWG6 89 aa17.47■□□□□ 0.39
PHRF1-205ENST00000533464 UBXN8O00124 270 aa17.47■□□□□ 0.39
PHRF1-205ENST00000533464 C21orf59P57076 290 aa17.47■□□□□ 0.39
PHRF1-205ENST00000533464 CDC42P60953 191 aa17.47■□□□□ 0.39
PHRF1-205ENST00000533464 SKP1P63208 163 aa17.47■□□□□ 0.39
PHRF1-205ENST00000533464 TOP3AQ13472 1001 aaPredicted RBP17.47■□□□□ 0.39
PHRF1-205ENST00000533464 IL23RQ5VWK5 629 aa17.47■□□□□ 0.39
PHRF1-205ENST00000533464 R3HCC1LQ7Z5L2 792 aaKnown RBP17.47■□□□□ 0.39
PHRF1-205ENST00000533464 RALGPS2Q86X27 583 aaPredicted RBP17.47■□□□□ 0.39
PHRF1-205ENST00000533464 PHF10Q8WUB8 498 aaKnown RBP17.47■□□□□ 0.39
PHRF1-205ENST00000533464 ATG10Q9H0Y0 220 aa17.47■□□□□ 0.39
PHRF1-205ENST00000533464 IQCF5A8MTL0 148 aa17.47■□□□□ 0.39
PHRF1-205ENST00000533464 CXorf49A8MYA2 514 aaPredicted RBP17.47■□□□□ 0.39
PHRF1-205ENST00000533464 ACLYP53396 1101 aa17.47■□□□□ 0.39
PHRF1-205ENST00000533464 XIAPP98170 497 aa17.47■□□□□ 0.39
PHRF1-205ENST00000533464 TRAF3Q13114 568 aa17.47■□□□□ 0.39
PHRF1-205ENST00000533464 GNA13Q14344 377 aa17.47■□□□□ 0.39
PHRF1-205ENST00000533464 ZDHHC20Q5W0Z9 365 aa17.47■□□□□ 0.39
PHRF1-205ENST00000533464 HLA-DQA1Q5Y7H0 255 aa17.47■□□□□ 0.39
PHRF1-205ENST00000533464 WDR36Q8NI36 951 aaKnown RBP17.47■□□□□ 0.39
PHRF1-205ENST00000533464 CENPIQ92674 756 aaPredicted RBP17.47■□□□□ 0.39
PHRF1-205ENST00000533464 TEPSINQ96N21 525 aa17.47■□□□□ 0.39
PHRF1-205ENST00000533464 CIB1Q99828 191 aa17.47■□□□□ 0.39
PHRF1-205ENST00000533464 DNAJC11Q9NVH1 559 aa17.47■□□□□ 0.39
PHRF1-205ENST00000533464 PHLPP1O60346 1717 aa17.47■□□□□ 0.39
PHRF1-205ENST00000533464 ISM1B1AKI9 464 aa17.46■□□□□ 0.39
PHRF1-205ENST00000533464 RPIAP49247 311 aa17.46■□□□□ 0.39
PHRF1-205ENST00000533464 KHDC1Q4VXA5 237 aaKnown RBP17.46■□□□□ 0.39
PHRF1-205ENST00000533464 TBC1D21Q8IYX1 336 aa17.46■□□□□ 0.39
PHRF1-205ENST00000533464 SLAIN1Q8ND83 568 aa17.46■□□□□ 0.39
PHRF1-205ENST00000533464 DCAKDQ8WVC6 231 aa17.46■□□□□ 0.39
PHRF1-205ENST00000533464 VPS35Q96QK1 796 aa17.46■□□□□ 0.39
PHRF1-205ENST00000533464 ADGRE2Q9UHX3 823 aa17.46■□□□□ 0.39
PHRF1-205ENST00000533464 CORO1CQ9ULV4 474 aaPredicted RBP17.46■□□□□ 0.39
PHRF1-205ENST00000533464 AP1S1P61966 158 aa17.46■□□□□ 0.39
PHRF1-205ENST00000533464 ANGPT1Q15389 498 aa17.46■□□□□ 0.39
PHRF1-205ENST00000533464 ZNF618Q5T7W0 954 aa17.46■□□□□ 0.39
PHRF1-205ENST00000533464 TRIM40Q6P9F5 258 aa17.46■□□□□ 0.39
PHRF1-205ENST00000533464 CPNE9Q8IYJ1 553 aa17.46■□□□□ 0.39
PHRF1-205ENST00000533464 ADCY4Q8NFM4 1077 aa17.46■□□□□ 0.39
PHRF1-205ENST00000533464 ESAMQ96AP7 390 aa17.46■□□□□ 0.39
PHRF1-205ENST00000533464 TAS2R1Q9NYW7 299 aa17.46■□□□□ 0.39
PHRF1-205ENST00000533464 ZNF232Q9UNY5 417 aa17.46■□□□□ 0.39
PHRF1-205ENST00000533464 U3KQV3 271 aa17.46■□□□□ 0.39
PHRF1-205ENST00000533464 H3BM21 787 aa17.46■□□□□ 0.39
PHRF1-205ENST00000533464 ITGA2P17301 1181 aa17.46■□□□□ 0.39
PHRF1-205ENST00000533464 GUCA1AP43080 201 aaPredicted RBP17.46■□□□□ 0.39
PHRF1-205ENST00000533464 SLC20A2Q08357 652 aa17.46■□□□□ 0.39
PHRF1-205ENST00000533464 GLYATQ6IB77 296 aa17.46■□□□□ 0.39
PHRF1-205ENST00000533464 FAM47BQ8NA70 645 aa17.46■□□□□ 0.39
PHRF1-205ENST00000533464 C19orf18Q8NEA5 215 aa17.46■□□□□ 0.39
PHRF1-205ENST00000533464 EBF4Q9BQW3 602 aa17.46■□□□□ 0.39
PHRF1-205ENST00000533464 SMIM31A0A1B0GVY4 71 aa17.46■□□□□ 0.39
PHRF1-205ENST00000533464 IGFBP4P22692 258 aa17.46■□□□□ 0.39
PHRF1-205ENST00000533464 RPS24P62847 133 aaKnown RBP17.46■□□□□ 0.39
PHRF1-205ENST00000533464 GAD2Q05329 585 aa17.46■□□□□ 0.39
PHRF1-205ENST00000533464 CAPN13Q6MZZ7 669 aaPredicted RBP17.46■□□□□ 0.39
PHRF1-205ENST00000533464 TAS1R3Q7RTX0 852 aa17.46■□□□□ 0.39
PHRF1-205ENST00000533464 FAM83DQ9H4H8 585 aa17.46■□□□□ 0.39
PHRF1-205ENST00000533464 SGK2Q9HBY8 427 aa17.46■□□□□ 0.39
PHRF1-205ENST00000533464 INHAP05111 366 aa17.45■□□□□ 0.38
PHRF1-205ENST00000533464 TCF3P15923 654 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms