RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 GLP2RO95838 553 aa16.54■□□□□ 0.24
CTSB-228ENST00000533455 MOCS2O96007 188 aaPredicted RBP16.54■□□□□ 0.24
CTSB-228ENST00000533455 LDLRP01130 860 aa16.54■□□□□ 0.24
CTSB-228ENST00000533455 RHOQP17081 205 aa16.54■□□□□ 0.24
CTSB-228ENST00000533455 OGNP20774 298 aaKnown RBP16.54■□□□□ 0.24
CTSB-228ENST00000533455 HTR1EP28566 365 aa16.54■□□□□ 0.24
CTSB-228ENST00000533455 PGFP49763 221 aa16.54■□□□□ 0.24
CTSB-228ENST00000533455 SCNN1GP51170 649 aa16.54■□□□□ 0.24
CTSB-228ENST00000533455 APLP1P51693 650 aa16.54■□□□□ 0.24
CTSB-228ENST00000533455 CLCQ05315 142 aa16.54■□□□□ 0.24
CTSB-228ENST00000533455 IRF5Q13568 498 aa16.54■□□□□ 0.24
CTSB-228ENST00000533455 LDLRAD1Q5T700 205 aa16.54■□□□□ 0.24
CTSB-228ENST00000533455 MRNIPQ6NTE8 343 aa16.54■□□□□ 0.24
CTSB-228ENST00000533455 TMEM26Q6ZUK4 368 aa16.54■□□□□ 0.24
CTSB-228ENST00000533455 RYBPQ8N488 228 aaPredicted RBP16.54■□□□□ 0.24
CTSB-228ENST00000533455 ARRDC2Q8TBH0 407 aa16.54■□□□□ 0.24
CTSB-228ENST00000533455 TBATAQ96M53 351 aa16.54■□□□□ 0.24
CTSB-228ENST00000533455 SERPINB11Q96P15 392 aa16.54■□□□□ 0.24
CTSB-228ENST00000533455 KLHL5Q96PQ7 755 aa16.54■□□□□ 0.24
CTSB-228ENST00000533455 GIT1Q9Y2X7 761 aa16.54■□□□□ 0.24
CTSB-228ENST00000533455 PLXNA3P51805 1871 aa16.54■□□□□ 0.24
CTSB-228ENST00000533455 CD3EAPO15446 510 aaKnown RBP16.53■□□□□ 0.24
CTSB-228ENST00000533455 GOT2P00505 430 aaKnown RBP16.53■□□□□ 0.24
CTSB-228ENST00000533455 RPS17P08708 135 aaKnown RBP16.53■□□□□ 0.24
CTSB-228ENST00000533455 JUNBP17275 347 aaPredicted RBP16.53■□□□□ 0.24
CTSB-228ENST00000533455 ETFBP38117 255 aa16.53■□□□□ 0.24
CTSB-228ENST00000533455 CD97P48960 835 aa16.53■□□□□ 0.24
CTSB-228ENST00000533455 DIO3P55073 304 aa16.53■□□□□ 0.24
CTSB-228ENST00000533455 NAA20P61599 178 aa16.53■□□□□ 0.24
CTSB-228ENST00000533455 ANKDD1AQ495B1 522 aa16.53■□□□□ 0.24
CTSB-228ENST00000533455 RABL3Q5HYI8 236 aa16.53■□□□□ 0.24
CTSB-228ENST00000533455 FAM117BQ6P1L5 589 aa16.53■□□□□ 0.24
CTSB-228ENST00000533455 EFL1Q7Z2Z2 1120 aaKnown RBP16.53■□□□□ 0.24
CTSB-228ENST00000533455 LRRTM3Q86VH5 581 aa16.53■□□□□ 0.24
CTSB-228ENST00000533455 OR10T2Q8NGX3 314 aa16.53■□□□□ 0.24
CTSB-228ENST00000533455 BPIFB1Q8TDL5 484 aa16.53■□□□□ 0.24
CTSB-228ENST00000533455 GIPC3Q8TF64 312 aa16.53■□□□□ 0.24
CTSB-228ENST00000533455 LPPQ93052 612 aa16.53■□□□□ 0.24
CTSB-228ENST00000533455 KIAA1191Q96A73 305 aa16.53■□□□□ 0.24
CTSB-228ENST00000533455 AARSD1Q9BTE6 412 aaKnown RBP16.53■□□□□ 0.24
CTSB-228ENST00000533455 BRINP2Q9C0B6 783 aa16.53■□□□□ 0.24
CTSB-228ENST00000533455 AGO3Q9H9G7 860 aaKnown RBP16.53■□□□□ 0.24
CTSB-228ENST00000533455 SP110Q9HB58 689 aa16.53■□□□□ 0.24
CTSB-228ENST00000533455 TMEM45AQ9NWC5 275 aa16.53■□□□□ 0.24
CTSB-228ENST00000533455 TMEM248Q9NWD8 314 aa16.53■□□□□ 0.24
CTSB-228ENST00000533455 UXTQ9UBK9 157 aaPredicted RBP16.53■□□□□ 0.24
CTSB-228ENST00000533455 LEF1Q9UJU2 399 aaPredicted RBP16.53■□□□□ 0.24
CTSB-228ENST00000533455 RIMKLBQ9ULI2 386 aa16.53■□□□□ 0.24
CTSB-228ENST00000533455 SH3GLB1Q9Y371 365 aa16.53■□□□□ 0.24
CTSB-228ENST00000533455 CYBBP04839 570 aa16.53■□□□□ 0.24
CTSB-228ENST00000533455 HAPLN1P10915 354 aaPredicted RBP16.53■□□□□ 0.24
CTSB-228ENST00000533455 EEF1DP29692 281 aaKnown RBP16.53■□□□□ 0.24
CTSB-228ENST00000533455 SFSWAPQ12872 951 aaKnown RBP16.53■□□□□ 0.24
CTSB-228ENST00000533455 SEMA3AQ14563 771 aa16.53■□□□□ 0.24
CTSB-228ENST00000533455 MAPRE1Q15691 268 aaKnown RBP16.53■□□□□ 0.24
CTSB-228ENST00000533455 PDCD4Q53EL6 469 aaKnown RBP16.53■□□□□ 0.24
CTSB-228ENST00000533455 XKR7Q5GH72 579 aa16.53■□□□□ 0.24
CTSB-228ENST00000533455 PAGE3Q5JUK9 113 aa16.53■□□□□ 0.24
CTSB-228ENST00000533455 ZNF773Q6PK81 442 aa16.53■□□□□ 0.24
CTSB-228ENST00000533455 PLEKHH3Q7Z736 793 aa16.53■□□□□ 0.24
CTSB-228ENST00000533455 PROSER1Q86XN7 944 aa16.53■□□□□ 0.24
CTSB-228ENST00000533455 TMEM199Q8N511 208 aa16.53■□□□□ 0.24
CTSB-228ENST00000533455 OR13F1Q8NGS4 319 aa16.53■□□□□ 0.24
CTSB-228ENST00000533455 DNAJB14Q8TBM8 379 aa16.53■□□□□ 0.24
CTSB-228ENST00000533455 MAGEE2Q8TD90 523 aaPredicted RBP16.53■□□□□ 0.24
CTSB-228ENST00000533455 TMEM209Q96SK2 561 aa16.53■□□□□ 0.24
CTSB-228ENST00000533455 C1QTNF3Q9BXJ4 246 aa16.53■□□□□ 0.24
CTSB-228ENST00000533455 TRIM8Q9BZR9 551 aa16.53■□□□□ 0.24
CTSB-228ENST00000533455 PALMDQ9NP74 551 aa16.53■□□□□ 0.24
CTSB-228ENST00000533455 TDRD15B5MCY1 1934 aaKnown RBP16.52■□□□□ 0.24
CTSB-228ENST00000533455 IQCA1LA6NCM1 817 aa16.52■□□□□ 0.24
CTSB-228ENST00000533455 GRXCR2A6NFK2 248 aa16.52■□□□□ 0.24
CTSB-228ENST00000533455 RPP40O75818 363 aaKnown RBP16.52■□□□□ 0.24
CTSB-228ENST00000533455 SNAP29O95721 258 aa16.52■□□□□ 0.24
CTSB-228ENST00000533455 NCK1P16333 377 aa16.52■□□□□ 0.24
CTSB-228ENST00000533455 ZNF12P17014 697 aa16.52■□□□□ 0.24
CTSB-228ENST00000533455 MOGQ16653 247 aa16.52■□□□□ 0.24
CTSB-228ENST00000533455 TYSND1Q2T9J0 566 aa16.52■□□□□ 0.24
CTSB-228ENST00000533455 FGD3Q5JSP0 725 aa16.52■□□□□ 0.24
CTSB-228ENST00000533455 ANKS6Q68DC2 871 aa16.52■□□□□ 0.24
CTSB-228ENST00000533455 MSANTD2Q6P1R3 559 aa16.52■□□□□ 0.24
CTSB-228ENST00000533455 AGMOQ6ZNB7 445 aa16.52■□□□□ 0.24
CTSB-228ENST00000533455 CPNE9Q8IYJ1 553 aa16.52■□□□□ 0.24
CTSB-228ENST00000533455 KIAA2013Q8IYS2 634 aa16.52■□□□□ 0.24
CTSB-228ENST00000533455 FBXO39Q8N4B4 442 aa16.52■□□□□ 0.24
CTSB-228ENST00000533455 PDPRQ8NCN5 879 aa16.52■□□□□ 0.24
CTSB-228ENST00000533455 PABPC5Q96DU9 382 aaKnown RBP16.52■□□□□ 0.24
CTSB-228ENST00000533455 SLC39A13Q96H72 371 aa16.52■□□□□ 0.24
CTSB-228ENST00000533455 COX4I2Q96KJ9 171 aa16.52■□□□□ 0.24
CTSB-228ENST00000533455 ZNF599Q96NL3 588 aa16.52■□□□□ 0.24
CTSB-228ENST00000533455 DERL2Q9GZP9 239 aa16.52■□□□□ 0.24
CTSB-228ENST00000533455 PAIP1Q9H074 479 aaKnown RBP16.52■□□□□ 0.24
CTSB-228ENST00000533455 NMUR1Q9HB89 426 aa16.52■□□□□ 0.24
CTSB-228ENST00000533455 GMIPQ9P107 970 aa16.52■□□□□ 0.24
CTSB-228ENST00000533455 IFT80Q9P2H3 777 aaPredicted RBP16.52■□□□□ 0.24
CTSB-228ENST00000533455 A0A1B0GTL3 188 aa16.52■□□□□ 0.23
CTSB-228ENST00000533455 CCDC162PA2VCL2 907 aa16.52■□□□□ 0.23
CTSB-228ENST00000533455 M0QZQ0 153 aa16.52■□□□□ 0.23
CTSB-228ENST00000533455 NOL3O60936 208 aaKnown RBP16.52■□□□□ 0.23
CTSB-228ENST00000533455 NPPAP01160 153 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms