RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 SLC17A4Q9Y2C5 497 aa11.9□□□□□ -0.5
SSBP3-214ENST00000533209 CSNK1G3Q9Y6M4 447 aa11.9□□□□□ -0.5
SSBP3-214ENST00000533209 CNOT1A5YKK6 2376 aaKnown RBP11.9□□□□□ -0.51
SSBP3-214ENST00000533209 DNAH14Q0VDD8 3507 aa11.89□□□□□ -0.51
SSBP3-214ENST00000533209 TP53BP1Q12888 1972 aaPredicted RBP11.89□□□□□ -0.51
SSBP3-214ENST00000533209 GLYATL1P3A0A0U1RQE8 302 aa11.89□□□□□ -0.51
SSBP3-214ENST00000533209 MROH6A6NGR9 719 aa11.89□□□□□ -0.51
SSBP3-214ENST00000533209 GIPC1O14908 333 aa11.89□□□□□ -0.51
SSBP3-214ENST00000533209 AQP9O43315 295 aa11.89□□□□□ -0.51
SSBP3-214ENST00000533209 UGT1A9O60656 530 aa11.89□□□□□ -0.51
SSBP3-214ENST00000533209 TNFP01375 233 aa11.89□□□□□ -0.51
SSBP3-214ENST00000533209 IVLP07476 585 aa11.89□□□□□ -0.51
SSBP3-214ENST00000533209 CELA2BP08218 269 aaPredicted RBP11.89□□□□□ -0.51
SSBP3-214ENST00000533209 UGT1A6P19224 532 aa11.89□□□□□ -0.51
SSBP3-214ENST00000533209 UGT1A1P22309 533 aa11.89□□□□□ -0.51
SSBP3-214ENST00000533209 UGT1A4P22310 534 aa11.89□□□□□ -0.51
SSBP3-214ENST00000533209 PSMA3P25788 255 aa11.89□□□□□ -0.51
SSBP3-214ENST00000533209 CA5AP35218 305 aa11.89□□□□□ -0.51
SSBP3-214ENST00000533209 UGT1A3P35503 534 aa11.89□□□□□ -0.51
SSBP3-214ENST00000533209 UGT1A5P35504 534 aa11.89□□□□□ -0.51
SSBP3-214ENST00000533209 TERF1P54274 439 aa11.89□□□□□ -0.51
SSBP3-214ENST00000533209 XIAPP98170 497 aa11.89□□□□□ -0.51
SSBP3-214ENST00000533209 C1orf61Q13536 156 aa11.89□□□□□ -0.51
SSBP3-214ENST00000533209 PTK6Q13882 451 aa11.89□□□□□ -0.51
SSBP3-214ENST00000533209 SEPT6Q14141 434 aa11.89□□□□□ -0.51
SSBP3-214ENST00000533209 INAVAQ3KP66 663 aa11.89□□□□□ -0.51
SSBP3-214ENST00000533209 CCDC38Q502W7 563 aa11.89□□□□□ -0.51
SSBP3-214ENST00000533209 DOK6Q6PKX4 331 aa11.89□□□□□ -0.51
SSBP3-214ENST00000533209 FAM151BQ6UXP7 276 aa11.89□□□□□ -0.51
SSBP3-214ENST00000533209 EID2Q8N6I1 236 aa11.89□□□□□ -0.51
SSBP3-214ENST00000533209 LMX1AQ8TE12 382 aa11.89□□□□□ -0.51
SSBP3-214ENST00000533209 SETD7Q8WTS6 366 aaKnown RBP11.89□□□□□ -0.51
SSBP3-214ENST00000533209 DNAJC1Q96KC8 554 aaKnown RBP11.89□□□□□ -0.51
SSBP3-214ENST00000533209 RUNDC3BQ96NL0 473 aa11.89□□□□□ -0.51
SSBP3-214ENST00000533209 VPS35Q96QK1 796 aa11.89□□□□□ -0.51
SSBP3-214ENST00000533209 RANBP9Q96S59 729 aa11.89□□□□□ -0.51
SSBP3-214ENST00000533209 CARS2Q9HA77 564 aaKnown RBP11.89□□□□□ -0.51
SSBP3-214ENST00000533209 UGT1A7Q9HAW7 530 aa11.89□□□□□ -0.51
SSBP3-214ENST00000533209 UGT1A10Q9HAW8 530 aa11.89□□□□□ -0.51
SSBP3-214ENST00000533209 UGT1A8Q9HAW9 530 aa11.89□□□□□ -0.51
SSBP3-214ENST00000533209 ARFGAP3Q9NP61 516 aa11.89□□□□□ -0.51
SSBP3-214ENST00000533209 NLE1Q9NVX2 485 aaPredicted RBP11.89□□□□□ -0.51
SSBP3-214ENST00000533209 VPS18Q9P253 973 aa11.89□□□□□ -0.51
SSBP3-214ENST00000533209 MOSPD1Q9UJG1 213 aa11.89□□□□□ -0.51
SSBP3-214ENST00000533209 SUFUQ9UMX1 484 aa11.89□□□□□ -0.51
SSBP3-214ENST00000533209 BPTFQ12830 3046 aa11.88□□□□□ -0.51
SSBP3-214ENST00000533209 HEATR9A2RTY3 570 aa11.88□□□□□ -0.51
SSBP3-214ENST00000533209 CCL22O00626 93 aa11.88□□□□□ -0.51
SSBP3-214ENST00000533209 TRIM38O00635 465 aa11.88□□□□□ -0.51
SSBP3-214ENST00000533209 FFAR2O15552 330 aa11.88□□□□□ -0.51
SSBP3-214ENST00000533209 GPR39O43194 453 aa11.88□□□□□ -0.51
SSBP3-214ENST00000533209 TMEM63AO94886 807 aa11.88□□□□□ -0.51
SSBP3-214ENST00000533209 SLC25A14O95258 325 aaPredicted RBP11.88□□□□□ -0.51
SSBP3-214ENST00000533209 KCNK5O95279 499 aa11.88□□□□□ -0.51
SSBP3-214ENST00000533209 CEACAM1P13688 526 aa11.88□□□□□ -0.51
SSBP3-214ENST00000533209 IVDP26440 423 aa11.88□□□□□ -0.51
SSBP3-214ENST00000533209 NOVA1P51513 510 aaKnown RBP11.88□□□□□ -0.51
SSBP3-214ENST00000533209 SESN2P58004 480 aaPredicted RBP11.88□□□□□ -0.51
SSBP3-214ENST00000533209 TMPRSS15P98073 1019 aa11.88□□□□□ -0.51
SSBP3-214ENST00000533209 DR1Q01658 176 aa11.88□□□□□ -0.51
SSBP3-214ENST00000533209 PEX6Q13608 980 aa11.88□□□□□ -0.51
SSBP3-214ENST00000533209 ELOCQ15369 112 aa11.88□□□□□ -0.51
SSBP3-214ENST00000533209 PPP1R7Q15435 360 aa11.88□□□□□ -0.51
SSBP3-214ENST00000533209 KHDC1Q4VXA5 237 aaKnown RBP11.88□□□□□ -0.51
SSBP3-214ENST00000533209 ZNF648Q5T619 568 aaPredicted RBP11.88□□□□□ -0.51
SSBP3-214ENST00000533209 LRRC8BQ6P9F7 803 aa11.88□□□□□ -0.51
SSBP3-214ENST00000533209 SYDE1Q6ZW31 735 aaPredicted RBP11.88□□□□□ -0.51
SSBP3-214ENST00000533209 MICALCLQ6ZW33 695 aa11.88□□□□□ -0.51
SSBP3-214ENST00000533209 ZNF572Q7Z3I7 529 aaPredicted RBP11.88□□□□□ -0.51
SSBP3-214ENST00000533209 JAMLQ86YT9 394 aa11.88□□□□□ -0.51
SSBP3-214ENST00000533209 PHYKPLQ8IUZ5 450 aa11.88□□□□□ -0.51
SSBP3-214ENST00000533209 FSTL5Q8N475 847 aaPredicted RBP11.88□□□□□ -0.51
SSBP3-214ENST00000533209 SPATA4Q8NEY3 305 aa11.88□□□□□ -0.51
SSBP3-214ENST00000533209 OR4C6Q8NH72 309 aa11.88□□□□□ -0.51
SSBP3-214ENST00000533209 STYXQ8WUJ0 223 aa11.88□□□□□ -0.51
SSBP3-214ENST00000533209 KRT12Q99456 494 aa11.88□□□□□ -0.51
SSBP3-214ENST00000533209 TMEM168Q9H0V1 697 aa11.88□□□□□ -0.51
SSBP3-214ENST00000533209 SLC32A1Q9H598 525 aa11.88□□□□□ -0.51
SSBP3-214ENST00000533209 SUDS3Q9H7L9 328 aaPredicted RBP11.88□□□□□ -0.51
SSBP3-214ENST00000533209 NLGN3Q9NZ94 848 aa11.88□□□□□ -0.51
SSBP3-214ENST00000533209 APPL1Q9UKG1 709 aa11.88□□□□□ -0.51
SSBP3-214ENST00000533209 SCN8AQ9UQD0 1980 aa11.88□□□□□ -0.51
SSBP3-214ENST00000533209 CCDC78A2IDD5 438 aa11.87□□□□□ -0.51
SSBP3-214ENST00000533209 NEMP2A6NFY4 417 aa11.87□□□□□ -0.51
SSBP3-214ENST00000533209 LMO7DNF2Z398 122 aa11.87□□□□□ -0.51
SSBP3-214ENST00000533209 H7C0S8 307 aa11.87□□□□□ -0.51
SSBP3-214ENST00000533209 TTI1O43156 1089 aa11.87□□□□□ -0.51
SSBP3-214ENST00000533209 SIGLEC6O43699 453 aa11.87□□□□□ -0.51
SSBP3-214ENST00000533209 DNAJC6O75061 913 aa11.87□□□□□ -0.51
SSBP3-214ENST00000533209 SRP72O76094 671 aaKnown RBP11.87□□□□□ -0.51
SSBP3-214ENST00000533209 PRAMEF1O95521 474 aa11.87□□□□□ -0.51
SSBP3-214ENST00000533209 ASMTLO95671 621 aa11.87□□□□□ -0.51
SSBP3-214ENST00000533209 TUBB4AP04350 444 aa11.87□□□□□ -0.51
SSBP3-214ENST00000533209 CTSEP14091 401 aa11.87□□□□□ -0.51
SSBP3-214ENST00000533209 ADRA1DP25100 572 aa11.87□□□□□ -0.51
SSBP3-214ENST00000533209 ADCY8P40145 1251 aa11.87□□□□□ -0.51
SSBP3-214ENST00000533209 HADHAP40939 763 aa11.87□□□□□ -0.51
SSBP3-214ENST00000533209 GNPDA1P46926 289 aa11.87□□□□□ -0.51
SSBP3-214ENST00000533209 NPY2RP49146 381 aa11.87□□□□□ -0.51
SSBP3-214ENST00000533209 ARSDP51689 593 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms