RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 PJA2O43164 708 aa17.1■□□□□ 0.33
PHRF1-204ENST00000532550 ECEL1O95672 775 aa17.1■□□□□ 0.33
PHRF1-204ENST00000532550 NFKB1P19838 968 aa17.1■□□□□ 0.33
PHRF1-204ENST00000532550 ATP5OP48047 213 aa17.1■□□□□ 0.33
PHRF1-204ENST00000532550 RWDD2BP57060 319 aa17.1■□□□□ 0.33
PHRF1-204ENST00000532550 ERVPABLB-1P60509 514 aa17.1■□□□□ 0.33
PHRF1-204ENST00000532550 LRP8Q14114 963 aa17.1■□□□□ 0.33
PHRF1-204ENST00000532550 C17orf82Q86X59 251 aaPredicted RBP17.1■□□□□ 0.33
PHRF1-204ENST00000532550 ZNF567Q8N184 647 aa17.1■□□□□ 0.33
PHRF1-204ENST00000532550 ARL14Q8N4G2 192 aa17.1■□□□□ 0.33
PHRF1-204ENST00000532550 EID2BQ96D98 161 aa17.1■□□□□ 0.33
PHRF1-204ENST00000532550 TMEM74Q96NL1 305 aa17.1■□□□□ 0.33
PHRF1-204ENST00000532550 SPATA16Q9BXB7 569 aa17.1■□□□□ 0.33
PHRF1-204ENST00000532550 RMI1Q9H9A7 625 aa17.1■□□□□ 0.33
PHRF1-204ENST00000532550 THSD1Q9NS62 852 aa17.1■□□□□ 0.33
PHRF1-204ENST00000532550 TRHDEQ9UKU6 1024 aa17.1■□□□□ 0.33
PHRF1-204ENST00000532550 EFR3BQ9Y2G0 817 aa17.1■□□□□ 0.33
PHRF1-204ENST00000532550 ZNF711Q9Y462 761 aa17.1■□□□□ 0.33
PHRF1-204ENST00000532550 PCDHGA8Q9Y5G5 932 aa17.1■□□□□ 0.33
PHRF1-204ENST00000532550 FADS2P1A8MWK0 482 aa17.09■□□□□ 0.33
PHRF1-204ENST00000532550 D6RAR5 112 aa17.09■□□□□ 0.33
PHRF1-204ENST00000532550 EPOP01588 193 aa17.09■□□□□ 0.33
PHRF1-204ENST00000532550 SLC4A1P02730 911 aa17.09■□□□□ 0.33
PHRF1-204ENST00000532550 CTNNA2P26232 953 aa17.09■□□□□ 0.33
PHRF1-204ENST00000532550 ITPKBP27987 946 aa17.09■□□□□ 0.33
PHRF1-204ENST00000532550 ALDH4A1P30038 563 aa17.09■□□□□ 0.33
PHRF1-204ENST00000532550 INHBCP55103 352 aa17.09■□□□□ 0.33
PHRF1-204ENST00000532550 MAZP56270 477 aaKnown RBP17.09■□□□□ 0.33
PHRF1-204ENST00000532550 WNT3AP56704 352 aa17.09■□□□□ 0.33
PHRF1-204ENST00000532550 PCBP4P57723 403 aaKnown RBP17.09■□□□□ 0.33
PHRF1-204ENST00000532550 CCDC173Q0VFZ6 552 aa17.09■□□□□ 0.33
PHRF1-204ENST00000532550 KIF5AQ12840 1032 aa17.09■□□□□ 0.33
PHRF1-204ENST00000532550 ALS2CLQ60I27 953 aa17.09■□□□□ 0.33
PHRF1-204ENST00000532550 SPRED1Q7Z699 444 aa17.09■□□□□ 0.33
PHRF1-204ENST00000532550 NAGSQ8N159 534 aa17.09■□□□□ 0.33
PHRF1-204ENST00000532550 SPC24Q8NBT2 197 aa17.09■□□□□ 0.33
PHRF1-204ENST00000532550 GPR26Q8NDV2 337 aa17.09■□□□□ 0.33
PHRF1-204ENST00000532550 ZNF248Q8NDW4 579 aa17.09■□□□□ 0.33
PHRF1-204ENST00000532550 SLC46A1Q96NT5 459 aa17.09■□□□□ 0.33
PHRF1-204ENST00000532550 QKIQ96PU8 341 aaKnown RBP eCLIP17.09■□□□□ 0.33
PHRF1-204ENST00000532550 FCRL5Q96RD9 977 aa17.09■□□□□ 0.33
PHRF1-204ENST00000532550 ZSCAN5AQ9BUG6 496 aa17.09■□□□□ 0.33
PHRF1-204ENST00000532550 OSBPL8Q9BZF1 889 aa17.09■□□□□ 0.33
PHRF1-204ENST00000532550 EPB41L5Q9HCM4 733 aa17.09■□□□□ 0.33
PHRF1-204ENST00000532550 ST14Q9Y5Y6 855 aa17.09■□□□□ 0.33
PHRF1-204ENST00000532550 OAS3Q9Y6K5 1087 aaKnown RBP17.09■□□□□ 0.33
PHRF1-204ENST00000532550 ZFC3H1O60293 1989 aaKnown RBP17.08■□□□□ 0.33
PHRF1-204ENST00000532550 COL27A1Q8IZC6 1860 aaPredicted RBP17.08■□□□□ 0.33
PHRF1-204ENST00000532550 LOC285095A0A1B0GVY8 99 aa17.08■□□□□ 0.32
PHRF1-204ENST00000532550 B4GAT1O43505 415 aa17.08■□□□□ 0.32
PHRF1-204ENST00000532550 DNAJC6O75061 913 aa17.08■□□□□ 0.32
PHRF1-204ENST00000532550 SLC25A14O95258 325 aaPredicted RBP17.08■□□□□ 0.32
PHRF1-204ENST00000532550 CDC25BP30305 580 aa17.08■□□□□ 0.32
PHRF1-204ENST00000532550 PDX1P52945 283 aa17.08■□□□□ 0.32
PHRF1-204ENST00000532550 B4GALNT1Q00973 533 aa17.08■□□□□ 0.32
PHRF1-204ENST00000532550 EIF3IQ13347 325 aaKnown RBP17.08■□□□□ 0.32
PHRF1-204ENST00000532550 MPP3Q13368 585 aa17.08■□□□□ 0.32
PHRF1-204ENST00000532550 IGF2-ASQ6U949 168 aa17.08■□□□□ 0.32
PHRF1-204ENST00000532550 CHST15Q7LFX5 561 aaPredicted RBP17.08■□□□□ 0.32
PHRF1-204ENST00000532550 B3GNT8Q7Z7M8 397 aa17.08■□□□□ 0.32
PHRF1-204ENST00000532550 PDZD3Q86UT5 571 aa17.08■□□□□ 0.32
PHRF1-204ENST00000532550 FBXO39Q8N4B4 442 aa17.08■□□□□ 0.32
PHRF1-204ENST00000532550 SLC25A41Q8N5S1 370 aa17.08■□□□□ 0.32
PHRF1-204ENST00000532550 TRAM1L1Q8N609 369 aa17.08■□□□□ 0.32
PHRF1-204ENST00000532550 PATE1Q8WXA2 126 aa17.08■□□□□ 0.32
PHRF1-204ENST00000532550 LIN37Q96GY3 246 aaPredicted RBP17.08■□□□□ 0.32
PHRF1-204ENST00000532550 FOXP3Q9BZS1 431 aa17.08■□□□□ 0.32
PHRF1-204ENST00000532550 RSPH14Q9UHP6 348 aa17.08■□□□□ 0.32
PHRF1-204ENST00000532550 AMFRQ9UKV5 643 aa17.08■□□□□ 0.32
PHRF1-204ENST00000532550 ATXN7L1Q9ULK2 861 aaPredicted RBP17.08■□□□□ 0.32
PHRF1-204ENST00000532550 PRKAB1Q9Y478 270 aa17.08■□□□□ 0.32
PHRF1-204ENST00000532550 TRBV23OR9-2A0A075B6M9 112 aa17.07■□□□□ 0.32
PHRF1-204ENST00000532550 A0A1W2PNU3 283 aaPredicted RBP17.07■□□□□ 0.32
PHRF1-204ENST00000532550 MACROD2A1Z1Q3 448 aa17.07■□□□□ 0.32
PHRF1-204ENST00000532550 GOLGA6L6A8MZA4 724 aa17.07■□□□□ 0.32
PHRF1-204ENST00000532550 F5H423 210 aaPredicted RBP17.07■□□□□ 0.32
PHRF1-204ENST00000532550 GRID2O43424 1007 aa17.07■□□□□ 0.32
PHRF1-204ENST00000532550 NUAK1O60285 661 aa17.07■□□□□ 0.32
PHRF1-204ENST00000532550 TJP3O95049 919 aa17.07■□□□□ 0.32
PHRF1-204ENST00000532550 TNFSF15O95150 251 aa17.07■□□□□ 0.32
PHRF1-204ENST00000532550 PTMAP06454 111 aaKnown RBP17.07■□□□□ 0.32
PHRF1-204ENST00000532550 RBL1P28749 1068 aa17.07■□□□□ 0.32
PHRF1-204ENST00000532550 GPR3P46089 330 aa17.07■□□□□ 0.32
PHRF1-204ENST00000532550 OR1D5P58170 312 aa17.07■□□□□ 0.32
PHRF1-204ENST00000532550 DCDC1P59894 354 aa17.07■□□□□ 0.32
PHRF1-204ENST00000532550 OTUD4Q01804 1114 aaKnown RBP17.07■□□□□ 0.32
PHRF1-204ENST00000532550 NOMO1Q15155 1222 aa17.07■□□□□ 0.32
PHRF1-204ENST00000532550 AMZ1Q400G9 498 aa17.07■□□□□ 0.32
PHRF1-204ENST00000532550 ZNF569Q5MCW4 686 aa17.07■□□□□ 0.32
PHRF1-204ENST00000532550 PDPK2PQ6A1A2 396 aa17.07■□□□□ 0.32
PHRF1-204ENST00000532550 KDELC1Q6UW63 502 aa17.07■□□□□ 0.32
PHRF1-204ENST00000532550 RAB11FIP2Q7L804 512 aa17.07■□□□□ 0.32
PHRF1-204ENST00000532550 PEX26Q7Z412 305 aa17.07■□□□□ 0.32
PHRF1-204ENST00000532550 PIM3Q86V86 326 aa17.07■□□□□ 0.32
PHRF1-204ENST00000532550 SYCE1Q8N0S2 351 aa17.07■□□□□ 0.32
PHRF1-204ENST00000532550 IPMKQ8NFU5 416 aa17.07■□□□□ 0.32
PHRF1-204ENST00000532550 ACTL9Q8TC94 416 aa17.07■□□□□ 0.32
PHRF1-204ENST00000532550 PRR11Q96HE9 360 aaPredicted RBP17.07■□□□□ 0.32
PHRF1-204ENST00000532550 NAF1Q96HR8 494 aaKnown RBP17.07■□□□□ 0.32
PHRF1-204ENST00000532550 MRGPRX2Q96LB1 330 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms